EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000006748 (Gene tree)
Gene ID: 100717452
Gene Symbol: URB1
Alias: C21orf108|KIAA0539|NPA1
Full Name: URB1 ribosome biogenesis homolog
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 62829 bases
Position: chrDS562907.1:1148945-1211773
Accession: 100717452
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000006080	Npa1	PF11707.8	9.7e-87	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000006817	URB1-201	6762	XM_003467273	ENSCPOP00000006080	2253 (aa)	XP_003467321	H0V8H5

Gene Model

Click here to download ENSCPOG00000006748's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000006748's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000006748	URB1	99	80.919	ENSG00000142207	URB1	99	80.810	Homo_sapiens
ENSCPOG00000006748	URB1	96	48.185	ENSAPOG00000020308	urb1	99	48.340	Acanthochromis_polyacanthus
ENSCPOG00000006748	URB1	99	76.673	ENSAMEG00000011998	URB1	99	76.673	Ailuropoda_melanoleuca
ENSCPOG00000006748	URB1	95	43.860	ENSACIG00000003248	urb1	96	43.998	Amphilophus_citrinellus
ENSCPOG00000006748	URB1	99	40.705	ENSAOCG00000010364	urb1	100	40.792	Amphiprion_ocellaris
ENSCPOG00000006748	URB1	97	52.532	ENSAPEG00000010758	urb1	99	52.532	Amphiprion_percula
ENSCPOG00000006748	URB1	98	44.326	ENSATEG00000011790	urb1	97	44.326	Anabas_testudineus
ENSCPOG00000006748	URB1	97	55.561	ENSAPLG00000012791	URB1	100	55.696	Anas_platyrhynchos
ENSCPOG00000006748	URB1	99	52.343	ENSACAG00000002817	URB1	99	51.850	Anolis_carolinensis
ENSCPOG00000006748	URB1	99	80.440	ENSANAG00000024617	URB1	99	80.440	Aotus_nancymaae
ENSCPOG00000006748	URB1	99	43.660	ENSACLG00000024865	urb1	100	43.666	Astatotilapia_calliptera
ENSCPOG00000006748	URB1	99	39.685	ENSAMXG00000012306	urb1	99	39.685	Astyanax_mexicanus
ENSCPOG00000006748	URB1	99	73.892	ENSBTAG00000012412	URB1	99	73.980	Bos_taurus
ENSCPOG00000006748	URB1	99	79.789	ENSCJAG00000009118	URB1	99	79.789	Callithrix_jacchus
ENSCPOG00000006748	URB1	99	77.007	ENSCAFG00000008892	URB1	99	77.007	Canis_familiaris
ENSCPOG00000006748	URB1	99	75.981	ENSCAFG00020025994	-	99	75.981	Canis_lupus_dingo
ENSCPOG00000006748	URB1	99	76.805	ENSCAFG00020025987	-	99	76.805	Canis_lupus_dingo
ENSCPOG00000006748	URB1	100	73.684	ENSCHIG00000015645	URB1	100	73.772	Capra_hircus
ENSCPOG00000006748	URB1	99	79.657	ENSTSYG00000013286	URB1	99	79.657	Carlito_syrichta
ENSCPOG00000006748	URB1	98	96.573	ENSCAPG00000015589	URB1	99	96.573	Cavia_aperea
ENSCPOG00000006748	URB1	99	80.722	ENSCCAG00000021299	URB1	99	80.722	Cebus_capucinus
ENSCPOG00000006748	URB1	99	80.634	ENSCATG00000042630	URB1	99	80.634	Cercocebus_atys
ENSCPOG00000006748	URB1	99	86.866	ENSCLAG00000005262	URB1	99	86.866	Chinchilla_lanigera
ENSCPOG00000006748	URB1	99	79.010	ENSCSAG00000009584	URB1	99	79.010	Chlorocebus_sabaeus
ENSCPOG00000006748	URB1	99	57.367	ENSCPBG00000006454	URB1	99	57.367	Chrysemys_picta_bellii
ENSCPOG00000006748	URB1	99	80.458	ENSCANG00000031088	URB1	99	80.458	Colobus_angolensis_palliatus
ENSCPOG00000006748	URB1	98	75.602	ENSCGRG00001010616	Urb1	99	75.385	Cricetulus_griseus_chok1gshd
ENSCPOG00000006748	URB1	98	75.349	ENSCGRG00000015840	Urb1	99	75.349	Cricetulus_griseus_crigri
ENSCPOG00000006748	URB1	97	49.189	ENSCSEG00000012616	urb1	99	49.189	Cynoglossus_semilaevis
ENSCPOG00000006748	URB1	89	54.817	ENSCVAG00000009076	urb1	96	54.817	Cyprinodon_variegatus
ENSCPOG00000006748	URB1	99	43.596	ENSDARG00000060308	urb1	99	43.654	Danio_rerio
ENSCPOG00000006748	URB1	85	75.880	ENSDNOG00000015586	URB1	99	75.880	Dasypus_novemcinctus
ENSCPOG00000006748	URB1	99	78.783	ENSDORG00000006735	Urb1	99	78.783	Dipodomys_ordii
ENSCPOG00000006748	URB1	92	80.295	ENSETEG00000009080	URB1	92	80.295	Echinops_telfairi
ENSCPOG00000006748	URB1	100	77.035	ENSEASG00005007711	URB1	100	77.035	Equus_asinus_asinus
ENSCPOG00000006748	URB1	97	88.161	ENSECAG00000013206	URB1	99	88.161	Equus_caballus
ENSCPOG00000006748	URB1	54	83.117	ENSEEUG00000003626	-	55	81.437	Erinaceus_europaeus
ENSCPOG00000006748	URB1	99	44.690	ENSELUG00000020516	urb1	98	44.828	Esox_lucius
ENSCPOG00000006748	URB1	99	76.408	ENSFCAG00000002177	URB1	99	76.452	Felis_catus
ENSCPOG00000006748	URB1	98	50.752	ENSFALG00000004636	URB1	99	50.774	Ficedula_albicollis
ENSCPOG00000006748	URB1	99	85.174	ENSFDAG00000007288	URB1	95	85.174	Fukomys_damarensis
ENSCPOG00000006748	URB1	99	41.437	ENSFHEG00000000202	urb1	99	42.290	Fundulus_heteroclitus
ENSCPOG00000006748	URB1	93	47.186	ENSGMOG00000001838	urb1	94	47.186	Gadus_morhua
ENSCPOG00000006748	URB1	99	55.434	ENSGALG00000015887	URB1	99	55.434	Gallus_gallus
ENSCPOG00000006748	URB1	95	52.733	ENSGAFG00000020694	urb1	98	52.733	Gambusia_affinis
ENSCPOG00000006748	URB1	99	44.474	ENSGACG00000011703	urb1	99	44.430	Gasterosteus_aculeatus
ENSCPOG00000006748	URB1	99	56.975	ENSGAGG00000022544	URB1	99	56.975	Gopherus_agassizii
ENSCPOG00000006748	URB1	99	80.810	ENSGGOG00000000285	URB1	99	80.810	Gorilla_gorilla
ENSCPOG00000006748	URB1	99	43.747	ENSHBUG00000001904	urb1	100	43.753	Haplochromis_burtoni
ENSCPOG00000006748	URB1	99	84.846	ENSHGLG00000004907	URB1	99	84.846	Heterocephalus_glaber_female
ENSCPOG00000006748	URB1	99	85.614	ENSHGLG00100010749	URB1	99	85.614	Heterocephalus_glaber_male
ENSCPOG00000006748	URB1	69	52.611	ENSHCOG00000018683	urb1	96	53.191	Hippocampus_comes
ENSCPOG00000006748	URB1	99	40.682	ENSIPUG00000014721	urb1	99	40.682	Ictalurus_punctatus
ENSCPOG00000006748	URB1	99	80.432	ENSSTOG00000004539	URB1	99	80.432	Ictidomys_tridecemlineatus
ENSCPOG00000006748	URB1	98	45.944	ENSKMAG00000006001	urb1	96	54.399	Kryptolebias_marmoratus
ENSCPOG00000006748	URB1	95	51.109	ENSLBEG00000027208	urb1	99	51.109	Labrus_bergylta
ENSCPOG00000006748	URB1	99	47.794	ENSLACG00000017059	URB1	99	47.794	Latimeria_chalumnae
ENSCPOG00000006748	URB1	99	45.981	ENSLOCG00000009190	urb1	99	46.024	Lepisosteus_oculatus
ENSCPOG00000006748	URB1	99	75.011	ENSLAFG00000010407	URB1	100	75.011	Loxodonta_africana
ENSCPOG00000006748	URB1	99	80.590	ENSMFAG00000034391	URB1	97	80.590	Macaca_fascicularis
ENSCPOG00000006748	URB1	99	80.326	ENSMMUG00000010295	URB1	99	80.326	Macaca_mulatta
ENSCPOG00000006748	URB1	99	79.225	ENSMNEG00000032981	URB1	99	79.225	Macaca_nemestrina
ENSCPOG00000006748	URB1	99	80.722	ENSMLEG00000041435	URB1	99	80.722	Mandrillus_leucophaeus
ENSCPOG00000006748	URB1	99	43.145	ENSMAMG00000011238	urb1	99	43.145	Mastacembelus_armatus
ENSCPOG00000006748	URB1	99	40.808	ENSMZEG00005011862	urb1	100	40.773	Maylandia_zebra
ENSCPOG00000006748	URB1	98	55.229	ENSMGAG00000014512	URB1	99	55.229	Meleagris_gallopavo
ENSCPOG00000006748	URB1	94	79.854	ENSMAUG00000010516	Urb1	99	79.854	Mesocricetus_auratus
ENSCPOG00000006748	URB1	100	79.322	ENSMICG00000016424	URB1	100	79.322	Microcebus_murinus
ENSCPOG00000006748	URB1	99	73.765	ENSMOCG00000012613	Urb1	99	73.765	Microtus_ochrogaster
ENSCPOG00000006748	URB1	99	61.623	ENSMODG00000021076	URB1	99	61.623	Monodelphis_domestica
ENSCPOG00000006748	URB1	99	41.630	ENSMALG00000017411	urb1	97	52.077	Monopterus_albus
ENSCPOG00000006748	URB1	99	74.560	MGP_CAROLIEiJ_G0020948	Urb1	99	74.560	Mus_caroli
ENSCPOG00000006748	URB1	99	74.604	ENSMUSG00000039929	Urb1	99	74.604	Mus_musculus
ENSCPOG00000006748	URB1	99	74.780	MGP_PahariEiJ_G0016653	Urb1	99	74.780	Mus_pahari
ENSCPOG00000006748	URB1	99	74.493	MGP_SPRETEiJ_G0021854	Urb1	99	74.493	Mus_spretus
ENSCPOG00000006748	URB1	99	76.146	ENSMPUG00000001123	URB1	99	76.146	Mustela_putorius_furo
ENSCPOG00000006748	URB1	99	75.991	ENSNGAG00000001905	Urb1	99	75.991	Nannospalax_galili
ENSCPOG00000006748	URB1	83	44.733	ENSNBRG00000001049	urb1	99	44.672	Neolamprologus_brichardi
ENSCPOG00000006748	URB1	99	79.152	ENSNLEG00000026872	URB1	99	79.049	Nomascus_leucogenys
ENSCPOG00000006748	URB1	94	66.348	ENSMEUG00000010828	URB1	96	58.232	Notamacropus_eugenii
ENSCPOG00000006748	URB1	99	71.127	ENSOPRG00000013482	URB1	100	71.127	Ochotona_princeps
ENSCPOG00000006748	URB1	99	85.022	ENSODEG00000002587	URB1	99	85.022	Octodon_degus
ENSCPOG00000006748	URB1	99	44.023	ENSONIG00000005599	urb1	100	44.066	Oreochromis_niloticus
ENSCPOG00000006748	URB1	99	77.650	ENSOCUG00000009381	URB1	99	77.650	Oryctolagus_cuniculus
ENSCPOG00000006748	URB1	99	43.657	ENSORLG00000003429	urb1	99	43.657	Oryzias_latipes
ENSCPOG00000006748	URB1	99	43.644	ENSORLG00020013785	urb1	99	43.644	Oryzias_latipes_hni
ENSCPOG00000006748	URB1	95	46.442	ENSORLG00015019421	urb1	98	46.442	Oryzias_latipes_hsok
ENSCPOG00000006748	URB1	78	49.775	ENSOMEG00000002094	urb1	98	50.226	Oryzias_melastigma
ENSCPOG00000006748	URB1	99	79.348	ENSOGAG00000017140	URB1	100	79.348	Otolemur_garnettii
ENSCPOG00000006748	URB1	97	75.085	ENSOARG00000013679	URB1	100	75.085	Ovis_aries
ENSCPOG00000006748	URB1	99	81.162	ENSPPAG00000003423	URB1	99	81.162	Pan_paniscus
ENSCPOG00000006748	URB1	99	76.629	ENSPPRG00000023131	URB1	99	76.629	Panthera_pardus
ENSCPOG00000006748	URB1	92	75.850	ENSPTIG00000016125	URB1	98	75.850	Panthera_tigris_altaica
ENSCPOG00000006748	URB1	99	81.030	ENSPTRG00000013852	URB1	99	81.030	Pan_troglodytes
ENSCPOG00000006748	URB1	99	80.722	ENSPANG00000021964	URB1	99	80.722	Papio_anubis
ENSCPOG00000006748	URB1	99	46.100	ENSPKIG00000003683	urb1	98	46.232	Paramormyrops_kingsleyae
ENSCPOG00000006748	URB1	99	75.275	ENSPEMG00000021205	Urb1	99	75.275	Peromyscus_maniculatus_bairdii
ENSCPOG00000006748	URB1	79	32.840	ENSPMAG00000009733	URB1	99	33.224	Petromyzon_marinus
ENSCPOG00000006748	URB1	99	61.053	ENSPCIG00000016350	URB1	99	61.279	Phascolarctos_cinereus
ENSCPOG00000006748	URB1	97	42.650	ENSPLAG00000004371	urb1	100	42.650	Poecilia_latipinna
ENSCPOG00000006748	URB1	99	43.222	ENSPMEG00000006634	urb1	99	43.222	Poecilia_mexicana
ENSCPOG00000006748	URB1	99	43.404	ENSPREG00000013453	urb1	99	43.404	Poecilia_reticulata
ENSCPOG00000006748	URB1	99	81.095	ENSPPYG00000011359	URB1	99	80.986	Pongo_abelii
ENSCPOG00000006748	URB1	99	64.815	ENSPCAG00000007430	URB1	99	64.815	Procavia_capensis
ENSCPOG00000006748	URB1	99	80.097	ENSPCOG00000022695	URB1	99	80.097	Propithecus_coquereli
ENSCPOG00000006748	URB1	99	75.264	ENSPVAG00000000889	URB1	99	75.264	Pteropus_vampyrus
ENSCPOG00000006748	URB1	99	42.539	ENSPNYG00000010589	urb1	100	42.459	Pundamilia_nyererei
ENSCPOG00000006748	URB1	99	40.608	ENSPNAG00000019324	urb1	99	40.653	Pygocentrus_nattereri
ENSCPOG00000006748	URB1	99	74.879	ENSRNOG00000002080	Urb1	99	74.967	Rattus_norvegicus
ENSCPOG00000006748	URB1	99	79.930	ENSRBIG00000033122	URB1	99	79.930	Rhinopithecus_bieti
ENSCPOG00000006748	URB1	99	80.018	ENSRROG00000040237	URB1	99	80.018	Rhinopithecus_roxellana
ENSCPOG00000006748	URB1	99	80.246	ENSSBOG00000027672	URB1	99	80.246	Saimiri_boliviensis_boliviensis
ENSCPOG00000006748	URB1	99	61.050	ENSSHAG00000005140	URB1	100	61.026	Sarcophilus_harrisii
ENSCPOG00000006748	URB1	92	46.018	ENSSFOG00015000339	urb1	98	46.044	Scleropages_formosus
ENSCPOG00000006748	URB1	99	43.911	ENSSMAG00000003782	urb1	99	44.168	Scophthalmus_maximus
ENSCPOG00000006748	URB1	99	44.749	ENSSDUG00000012313	urb1	99	44.749	Seriola_dumerili
ENSCPOG00000006748	URB1	99	44.595	ENSSLDG00000023179	urb1	99	44.595	Seriola_lalandi_dorsalis
ENSCPOG00000006748	URB1	98	54.237	ENSSPUG00000012447	URB1	99	54.345	Sphenodon_punctatus
ENSCPOG00000006748	URB1	99	44.137	ENSSPAG00000006325	urb1	99	44.137	Stegastes_partitus
ENSCPOG00000006748	URB1	99	75.748	ENSSSCG00000032024	URB1	99	75.748	Sus_scrofa
ENSCPOG00000006748	URB1	73	56.631	ENSTGUG00000013442	URB1	100	56.478	Taeniopygia_guttata
ENSCPOG00000006748	URB1	99	43.693	ENSTRUG00000009372	urb1	99	43.556	Takifugu_rubripes
ENSCPOG00000006748	URB1	99	42.876	ENSTNIG00000016277	urb1	99	42.876	Tetraodon_nigroviridis
ENSCPOG00000006748	URB1	81	80.175	ENSTBEG00000010044	URB1	81	80.175	Tupaia_belangeri
ENSCPOG00000006748	URB1	91	77.615	ENSTTRG00000007712	URB1	92	77.720	Tursiops_truncatus
ENSCPOG00000006748	URB1	99	76.761	ENSUAMG00000012231	URB1	99	76.761	Ursus_americanus
ENSCPOG00000006748	URB1	91	79.225	ENSUMAG00000017419	URB1	97	79.276	Ursus_maritimus
ENSCPOG00000006748	URB1	69	90.345	ENSVPAG00000001164	URB1	71	90.345	Vicugna_pacos
ENSCPOG00000006748	URB1	99	76.473	ENSVVUG00000000551	URB1	99	76.473	Vulpes_vulpes
ENSCPOG00000006748	URB1	99	49.182	ENSXETG00000009895	urb1	100	49.269	Xenopus_tropicalis
ENSCPOG00000006748	URB1	99	41.700	ENSXCOG00000005500	urb1	98	45.384	Xiphophorus_couchianus
ENSCPOG00000006748	URB1	99	41.711	ENSXMAG00000007253	urb1	98	45.356	Xiphophorus_maculatus