EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000007518 (Gene tree)
Gene ID: 100727456
Gene Symbol: PRPF6
Alias: ANT-1|C20orf14|Prp6|RP60|SNRNP102|TOM|U5-102K|bB152O15.1|hPrp6
Full Name: pre-mRNA processing factor 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 52012 bases
Position: chrDS562974.1:337730-389741
Accession: 100727456
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000006785	PRP1_N	PF06424.12	1.5e-57	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000007591	PRPF6-201	3016	XM_003462783	ENSCPOP00000006785	941 (aa)	XP_003462831	H0VAB1

Gene Model

Click here to download ENSCPOG00000007518's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000007518's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000007518	PRPF6	100	98.087	ENSG00000101161	PRPF6	100	98.087	Homo_sapiens
ENSCPOG00000007518	PRPF6	100	93.199	ENSAPOG00000010395	prpf6	96	93.624	Acanthochromis_polyacanthus
ENSCPOG00000007518	PRPF6	100	97.558	ENSAMEG00000001916	PRPF6	99	97.558	Ailuropoda_melanoleuca
ENSCPOG00000007518	PRPF6	100	92.880	ENSACIG00000019862	prpf6	96	93.305	Amphilophus_citrinellus
ENSCPOG00000007518	PRPF6	100	93.092	ENSAOCG00000012988	prpf6	96	93.518	Amphiprion_ocellaris
ENSCPOG00000007518	PRPF6	100	86.397	ENSAPEG00000008301	prpf6	100	86.929	Amphiprion_percula
ENSCPOG00000007518	PRPF6	100	92.561	ENSATEG00000005581	prpf6	96	92.986	Anabas_testudineus
ENSCPOG00000007518	PRPF6	100	98.087	ENSACAG00000006464	PRPF6	95	98.087	Anolis_carolinensis
ENSCPOG00000007518	PRPF6	100	98.193	ENSANAG00000012661	PRPF6	100	98.822	Aotus_nancymaae
ENSCPOG00000007518	PRPF6	100	92.774	ENSACLG00000025875	prpf6	96	93.199	Astatotilapia_calliptera
ENSCPOG00000007518	PRPF6	99	93.085	ENSAMXG00000001929	prpf6	96	93.511	Astyanax_mexicanus
ENSCPOG00000007518	PRPF6	100	98.406	ENSBTAG00000011656	PRPF6	100	98.406	Bos_taurus
ENSCPOG00000007518	PRPF6	100	98.193	ENSCJAG00000010616	PRPF6	100	98.193	Callithrix_jacchus
ENSCPOG00000007518	PRPF6	100	98.618	ENSCAFG00000013165	PRPF6	100	98.618	Canis_familiaris
ENSCPOG00000007518	PRPF6	100	98.618	ENSCAFG00020002050	PRPF6	100	98.618	Canis_lupus_dingo
ENSCPOG00000007518	PRPF6	100	98.406	ENSCHIG00000018187	PRPF6	100	98.406	Capra_hircus
ENSCPOG00000007518	PRPF6	100	98.831	ENSTSYG00000007814	PRPF6	100	98.831	Carlito_syrichta
ENSCPOG00000007518	PRPF6	97	98.691	ENSCAPG00000015077	PRPF6	100	98.691	Cavia_aperea
ENSCPOG00000007518	PRPF6	100	95.005	ENSCCAG00000024564	PRPF6	100	95.005	Cebus_capucinus
ENSCPOG00000007518	PRPF6	100	97.981	ENSCATG00000037473	PRPF6	100	97.981	Cercocebus_atys
ENSCPOG00000007518	PRPF6	100	95.962	ENSCLAG00000003854	PRPF6	100	95.962	Chinchilla_lanigera
ENSCPOG00000007518	PRPF6	100	92.925	ENSCSAG00000016742	PRPF6	100	92.925	Chlorocebus_sabaeus
ENSCPOG00000007518	PRPF6	85	81.301	ENSCHOG00000003315	-	100	81.301	Choloepus_hoffmanni
ENSCPOG00000007518	PRPF6	100	98.406	ENSCPBG00000013964	PRPF6	96	98.406	Chrysemys_picta_bellii
ENSCPOG00000007518	PRPF6	99	73.573	ENSCING00000008817	-	99	73.573	Ciona_intestinalis
ENSCPOG00000007518	PRPF6	100	97.981	ENSCANG00000038230	PRPF6	100	97.981	Colobus_angolensis_palliatus
ENSCPOG00000007518	PRPF6	100	99.575	ENSCGRG00001022666	Prpf6	100	99.575	Cricetulus_griseus_chok1gshd
ENSCPOG00000007518	PRPF6	100	87.354	ENSCSEG00000018561	prpf6	100	87.779	Cynoglossus_semilaevis
ENSCPOG00000007518	PRPF6	100	93.092	ENSCVAG00000010550	prpf6	96	93.518	Cyprinodon_variegatus
ENSCPOG00000007518	PRPF6	100	92.667	ENSDARG00000091367	prpf6	99	93.092	Danio_rerio
ENSCPOG00000007518	PRPF6	100	97.768	ENSDNOG00000040544	PRPF6	100	97.768	Dasypus_novemcinctus
ENSCPOG00000007518	PRPF6	91	98.598	ENSDORG00000005406	Prpf6	100	98.598	Dipodomys_ordii
ENSCPOG00000007518	PRPF6	99	72.013	FBgn0036828	CG6841	98	72.318	Drosophila_melanogaster
ENSCPOG00000007518	PRPF6	85	95.760	ENSETEG00000004447	PRPF6	85	95.760	Echinops_telfairi
ENSCPOG00000007518	PRPF6	99	87.169	ENSEBUG00000008835	prpf6	99	87.169	Eptatretus_burgeri
ENSCPOG00000007518	PRPF6	100	98.618	ENSEASG00005023115	PRPF6	100	98.618	Equus_asinus_asinus
ENSCPOG00000007518	PRPF6	100	94.368	ENSECAG00000013983	PRPF6	100	94.368	Equus_caballus
ENSCPOG00000007518	PRPF6	90	100.000	ENSEEUG00000000180	PRPF6	82	100.000	Erinaceus_europaeus
ENSCPOG00000007518	PRPF6	100	91.605	ENSELUG00000001945	prpf6	93	91.605	Esox_lucius
ENSCPOG00000007518	PRPF6	100	98.618	ENSFCAG00000001183	PRPF6	100	98.618	Felis_catus
ENSCPOG00000007518	PRPF6	100	90.648	ENSFALG00000006046	-	97	90.648	Ficedula_albicollis
ENSCPOG00000007518	PRPF6	100	98.300	ENSFALG00000010326	-	97	98.300	Ficedula_albicollis
ENSCPOG00000007518	PRPF6	100	98.512	ENSFDAG00000006451	PRPF6	100	100.000	Fukomys_damarensis
ENSCPOG00000007518	PRPF6	100	93.730	ENSFHEG00000000560	prpf6	96	93.730	Fundulus_heteroclitus
ENSCPOG00000007518	PRPF6	100	89.535	ENSGMOG00000015622	prpf6	99	89.535	Gadus_morhua
ENSCPOG00000007518	PRPF6	100	98.087	ENSGALG00000006001	PRPF6	100	98.087	Gallus_gallus
ENSCPOG00000007518	PRPF6	100	88.629	ENSGAFG00000021109	prpf6	96	89.054	Gambusia_affinis
ENSCPOG00000007518	PRPF6	100	91.605	ENSGACG00000002576	prpf6	99	91.605	Gasterosteus_aculeatus
ENSCPOG00000007518	PRPF6	100	98.300	ENSGAGG00000008653	PRPF6	96	98.300	Gopherus_agassizii
ENSCPOG00000007518	PRPF6	100	98.087	ENSGGOG00000016876	PRPF6	100	98.087	Gorilla_gorilla
ENSCPOG00000007518	PRPF6	100	92.774	ENSHBUG00000004496	prpf6	96	93.199	Haplochromis_burtoni
ENSCPOG00000007518	PRPF6	100	99.787	ENSHGLG00000009222	PRPF6	100	99.787	Heterocephalus_glaber_female
ENSCPOG00000007518	PRPF6	97	99.782	ENSHGLG00100016600	PRPF6	100	99.782	Heterocephalus_glaber_male
ENSCPOG00000007518	PRPF6	100	91.605	ENSHCOG00000011513	prpf6	96	92.030	Hippocampus_comes
ENSCPOG00000007518	PRPF6	100	93.624	ENSIPUG00000004912	prpf6	96	93.624	Ictalurus_punctatus
ENSCPOG00000007518	PRPF6	100	97.028	ENSSTOG00000002922	PRPF6	100	97.028	Ictidomys_tridecemlineatus
ENSCPOG00000007518	PRPF6	100	99.787	ENSJJAG00000000836	Prpf6	100	99.787	Jaculus_jaculus
ENSCPOG00000007518	PRPF6	100	92.561	ENSKMAG00000017800	prpf6	96	92.986	Kryptolebias_marmoratus
ENSCPOG00000007518	PRPF6	100	92.242	ENSLBEG00000012582	prpf6	96	92.242	Labrus_bergylta
ENSCPOG00000007518	PRPF6	100	94.793	ENSLOCG00000004827	prpf6	96	93.836	Lepisosteus_oculatus
ENSCPOG00000007518	PRPF6	100	97.875	ENSLAFG00000005272	PRPF6	100	97.875	Loxodonta_africana
ENSCPOG00000007518	PRPF6	100	97.981	ENSMFAG00000037542	PRPF6	100	97.981	Macaca_fascicularis
ENSCPOG00000007518	PRPF6	100	91.401	ENSMMUG00000015558	PRPF6	98	99.653	Macaca_mulatta
ENSCPOG00000007518	PRPF6	100	83.686	ENSMNEG00000045555	PRPF6	100	83.686	Macaca_nemestrina
ENSCPOG00000007518	PRPF6	100	92.880	ENSMAMG00000010718	prpf6	96	93.305	Mastacembelus_armatus
ENSCPOG00000007518	PRPF6	94	92.290	ENSMZEG00005026539	prpf6	100	92.744	Maylandia_zebra
ENSCPOG00000007518	PRPF6	100	92.251	ENSMZEG00005015261	-	99	92.675	Maylandia_zebra
ENSCPOG00000007518	PRPF6	97	98.255	ENSMGAG00000006634	PRPF6	100	98.255	Meleagris_gallopavo
ENSCPOG00000007518	PRPF6	100	99.681	ENSMAUG00000013969	Prpf6	100	99.681	Mesocricetus_auratus
ENSCPOG00000007518	PRPF6	87	98.297	ENSMICG00000017793	PRPF6	99	98.297	Microcebus_murinus
ENSCPOG00000007518	PRPF6	100	99.575	ENSMOCG00000001701	Prpf6	100	99.575	Microtus_ochrogaster
ENSCPOG00000007518	PRPF6	100	91.923	ENSMMOG00000020419	prpf6	100	92.349	Mola_mola
ENSCPOG00000007518	PRPF6	99	99.014	ENSMODG00000017051	PRPF6	99	99.014	Monodelphis_domestica
ENSCPOG00000007518	PRPF6	99	93.018	ENSMALG00000000089	prpf6	100	93.018	Monopterus_albus
ENSCPOG00000007518	PRPF6	100	92.986	MGP_CAROLIEiJ_G0024814	Prpf6	100	100.000	Mus_caroli
ENSCPOG00000007518	PRPF6	100	99.681	ENSMUSG00000002455	Prpf6	100	100.000	Mus_musculus
ENSCPOG00000007518	PRPF6	100	99.681	MGP_PahariEiJ_G0026262	Prpf6	100	100.000	Mus_pahari
ENSCPOG00000007518	PRPF6	100	99.681	MGP_SPRETEiJ_G0025741	Prpf6	100	100.000	Mus_spretus
ENSCPOG00000007518	PRPF6	91	98.093	ENSMPUG00000008673	PRPF6	99	98.093	Mustela_putorius_furo
ENSCPOG00000007518	PRPF6	100	99.894	ENSNGAG00000003365	Prpf6	100	99.894	Nannospalax_galili
ENSCPOG00000007518	PRPF6	100	92.880	ENSNBRG00000015025	prpf6	96	93.305	Neolamprologus_brichardi
ENSCPOG00000007518	PRPF6	100	97.981	ENSNLEG00000010208	PRPF6	100	97.981	Nomascus_leucogenys
ENSCPOG00000007518	PRPF6	100	89.130	ENSMEUG00000009824	-	90	89.130	Notamacropus_eugenii
ENSCPOG00000007518	PRPF6	100	93.730	ENSODEG00000004841	PRPF6	100	93.730	Octodon_degus
ENSCPOG00000007518	PRPF6	100	92.774	ENSONIG00000017406	prpf6	96	93.199	Oreochromis_niloticus
ENSCPOG00000007518	PRPF6	100	98.618	ENSOANG00000004920	PRPF6	100	98.618	Ornithorhynchus_anatinus
ENSCPOG00000007518	PRPF6	99	97.103	ENSOCUG00000014151	PRPF6	100	97.103	Oryctolagus_cuniculus
ENSCPOG00000007518	PRPF6	100	92.561	ENSORLG00000009592	prpf6	96	92.561	Oryzias_latipes
ENSCPOG00000007518	PRPF6	100	92.667	ENSORLG00020001458	prpf6	96	92.667	Oryzias_latipes_hni
ENSCPOG00000007518	PRPF6	100	92.667	ENSORLG00015018762	prpf6	96	92.667	Oryzias_latipes_hsok
ENSCPOG00000007518	PRPF6	100	92.561	ENSOMEG00000012174	prpf6	96	92.986	Oryzias_melastigma
ENSCPOG00000007518	PRPF6	100	91.295	ENSOGAG00000007573	PRPF6	100	91.295	Otolemur_garnettii
ENSCPOG00000007518	PRPF6	100	97.981	ENSOARG00000008776	PRPF6	99	97.981	Ovis_aries
ENSCPOG00000007518	PRPF6	100	98.087	ENSPPAG00000008686	PRPF6	100	98.087	Pan_paniscus
ENSCPOG00000007518	PRPF6	100	98.512	ENSPPRG00000008497	PRPF6	100	98.512	Panthera_pardus
ENSCPOG00000007518	PRPF6	97	98.473	ENSPTIG00000011184	PRPF6	97	98.473	Panthera_tigris_altaica
ENSCPOG00000007518	PRPF6	100	98.087	ENSPTRG00000013765	PRPF6	100	98.087	Pan_troglodytes
ENSCPOG00000007518	PRPF6	100	97.450	ENSPANG00000024135	PRPF6	100	97.450	Papio_anubis
ENSCPOG00000007518	PRPF6	100	94.368	ENSPKIG00000005627	prpf6	99	94.793	Paramormyrops_kingsleyae
ENSCPOG00000007518	PRPF6	94	98.526	ENSPSIG00000007717	PRPF6	100	98.526	Pelodiscus_sinensis
ENSCPOG00000007518	PRPF6	100	90.340	ENSPMGG00000008925	prpf6	96	90.552	Periophthalmus_magnuspinnatus
ENSCPOG00000007518	PRPF6	100	99.575	ENSPEMG00000016036	Prpf6	100	99.575	Peromyscus_maniculatus_bairdii
ENSCPOG00000007518	PRPF6	99	88.310	ENSPMAG00000006144	prpf6	99	88.310	Petromyzon_marinus
ENSCPOG00000007518	PRPF6	100	98.725	ENSPCIG00000017909	PRPF6	100	98.725	Phascolarctos_cinereus
ENSCPOG00000007518	PRPF6	100	93.305	ENSPFOG00000006431	prpf6	96	93.730	Poecilia_formosa
ENSCPOG00000007518	PRPF6	100	93.199	ENSPLAG00000005974	prpf6	96	93.624	Poecilia_latipinna
ENSCPOG00000007518	PRPF6	100	93.411	ENSPMEG00000009977	prpf6	96	93.836	Poecilia_mexicana
ENSCPOG00000007518	PRPF6	100	93.305	ENSPREG00000017993	prpf6	92	93.730	Poecilia_reticulata
ENSCPOG00000007518	PRPF6	100	97.556	ENSPPYG00000011256	PRPF6	100	97.556	Pongo_abelii
ENSCPOG00000007518	PRPF6	95	99.673	ENSPCAG00000006536	PRPF6	88	99.673	Procavia_capensis
ENSCPOG00000007518	PRPF6	100	98.300	ENSPCOG00000016881	PRPF6	100	98.300	Propithecus_coquereli
ENSCPOG00000007518	PRPF6	100	92.455	ENSPVAG00000014316	PRPF6	100	92.455	Pteropus_vampyrus
ENSCPOG00000007518	PRPF6	100	76.327	ENSPNYG00000001939	prpf6	70	90.048	Pundamilia_nyererei
ENSCPOG00000007518	PRPF6	100	93.411	ENSPNAG00000015606	prpf6	96	93.836	Pygocentrus_nattereri
ENSCPOG00000007518	PRPF6	100	99.575	ENSRNOG00000051498	Prpf6	100	99.575	Rattus_norvegicus
ENSCPOG00000007518	PRPF6	100	97.981	ENSRBIG00000043613	PRPF6	100	97.981	Rhinopithecus_bieti
ENSCPOG00000007518	PRPF6	100	94.815	ENSRROG00000040969	PRPF6	98	98.270	Rhinopithecus_roxellana
ENSCPOG00000007518	PRPF6	91	95.398	ENSSBOG00000020632	PRPF6	91	95.398	Saimiri_boliviensis_boliviensis
ENSCPOG00000007518	PRPF6	100	98.725	ENSSHAG00000016810	PRPF6	100	98.725	Sarcophilus_harrisii
ENSCPOG00000007518	PRPF6	99	94.629	ENSSFOG00015020859	prpf6	100	95.059	Scleropages_formosus
ENSCPOG00000007518	PRPF6	100	92.136	ENSSMAG00000008112	prpf6	96	92.136	Scophthalmus_maximus
ENSCPOG00000007518	PRPF6	100	92.774	ENSSDUG00000016142	prpf6	96	93.199	Seriola_dumerili
ENSCPOG00000007518	PRPF6	100	92.774	ENSSLDG00000025283	prpf6	100	89.692	Seriola_lalandi_dorsalis
ENSCPOG00000007518	PRPF6	94	96.825	ENSSPUG00000018260	PRPF6	100	96.825	Sphenodon_punctatus
ENSCPOG00000007518	PRPF6	100	92.774	ENSSPAG00000015850	prpf6	96	93.199	Stegastes_partitus
ENSCPOG00000007518	PRPF6	100	98.512	ENSSSCG00000029119	PRPF6	100	98.413	Sus_scrofa
ENSCPOG00000007518	PRPF6	100	98.406	ENSTGUG00000007221	PRPF6	99	98.406	Taeniopygia_guttata
ENSCPOG00000007518	PRPF6	100	91.711	ENSTRUG00000002920	prpf6	96	92.136	Takifugu_rubripes
ENSCPOG00000007518	PRPF6	100	85.412	ENSTNIG00000017873	prpf6	100	85.835	Tetraodon_nigroviridis
ENSCPOG00000007518	PRPF6	89	98.895	ENSTBEG00000005348	PRPF6	85	98.895	Tupaia_belangeri
ENSCPOG00000007518	PRPF6	100	97.981	ENSTTRG00000013068	PRPF6	100	97.981	Tursiops_truncatus
ENSCPOG00000007518	PRPF6	98	97.065	ENSUMAG00000021631	PRPF6	98	97.065	Ursus_maritimus
ENSCPOG00000007518	PRPF6	100	98.618	ENSVVUG00000014948	PRPF6	100	98.618	Vulpes_vulpes
ENSCPOG00000007518	PRPF6	100	96.281	ENSXETG00000012054	prpf6	97	96.281	Xenopus_tropicalis
ENSCPOG00000007518	PRPF6	100	93.411	ENSXCOG00000008082	prpf6	96	93.836	Xiphophorus_couchianus
ENSCPOG00000007518	PRPF6	100	93.411	ENSXMAG00000015581	prpf6	96	93.836	Xiphophorus_maculatus