EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000007533 (Gene tree)
Gene ID: 100727341
Gene Symbol: -
Alias: -
Full Name: eukaryotic translation initiation factor 3 subunit C
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 15234 bases
Position: chrDS562859.1:44747007-44762240
Accession: 100727341
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000006797	eIF-3c_N	PF05470.12	4.4e-271	1	1
ENSCPOP00000022459	eIF-3c_N	PF05470.12	4.4e-271	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000031941	-	3502	XM_003477839	ENSCPOP00000022459	913 (aa)	XP_003477887	H0VAC1
ENSCPOT00000007606	-	3408	-	ENSCPOP00000006797	913 (aa)	-	H0VAC1

Gene Model

Click here to download ENSCPOG00000007533's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000007533's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000007533	-	100	98.138	ENSG00000184110	EIF3C	100	100.000	Homo_sapiens
ENSCPOG00000007533	-	100	98.031	ENSG00000205609	EIF3CL	100	98.031	Homo_sapiens
ENSCPOG00000007533	-	99	76.056	ENSAPOG00000024092	eif3c	92	84.339	Acanthochromis_polyacanthus
ENSCPOG00000007533	-	100	98.686	ENSAMEG00000015454	-	100	98.686	Ailuropoda_melanoleuca
ENSCPOG00000007533	-	99	73.597	ENSACIG00000015082	eif3c	93	83.887	Amphilophus_citrinellus
ENSCPOG00000007533	-	94	84.158	ENSAOCG00000021466	eif3c	98	76.496	Amphiprion_ocellaris
ENSCPOG00000007533	-	94	84.158	ENSAPEG00000010521	eif3c	98	76.496	Amphiprion_percula
ENSCPOG00000007533	-	99	76.196	ENSATEG00000019001	eif3c	98	76.630	Anabas_testudineus
ENSCPOG00000007533	-	100	86.790	ENSACAG00000005937	-	100	86.900	Anolis_carolinensis
ENSCPOG00000007533	-	100	98.028	ENSANAG00000020640	-	100	98.028	Aotus_nancymaae
ENSCPOG00000007533	-	84	83.471	ENSACLG00000009347	eif3c	94	83.471	Astatotilapia_calliptera
ENSCPOG00000007533	-	84	80.619	ENSACLG00000009322	eif3c	92	80.619	Astatotilapia_calliptera
ENSCPOG00000007533	-	99	76.593	ENSAMXG00000020949	eif3c	98	76.638	Astyanax_mexicanus
ENSCPOG00000007533	-	100	98.028	ENSBTAG00000006543	EIF3CL	100	98.028	Bos_taurus
ENSCPOG00000007533	-	95	42.601	WBGene00001226	eif-3.C	93	42.793	Caenorhabditis_elegans
ENSCPOG00000007533	-	100	97.919	ENSCJAG00000006341	-	100	97.919	Callithrix_jacchus
ENSCPOG00000007533	-	100	98.467	ENSCAFG00000017143	-	100	98.467	Canis_familiaris
ENSCPOG00000007533	-	100	98.576	ENSCAFG00020017587	-	100	98.576	Canis_lupus_dingo
ENSCPOG00000007533	-	100	98.138	ENSCHIG00000024795	-	100	98.138	Capra_hircus
ENSCPOG00000007533	-	100	97.919	ENSTSYG00000003486	-	100	97.919	Carlito_syrichta
ENSCPOG00000007533	-	96	90.487	ENSCAPG00000015887	-	100	90.487	Cavia_aperea
ENSCPOG00000007533	-	100	96.933	ENSCCAG00000034928	-	100	96.933	Cebus_capucinus
ENSCPOG00000007533	-	99	82.819	ENSCCAG00000029099	-	99	81.648	Cebus_capucinus
ENSCPOG00000007533	-	100	92.662	ENSCCAG00000027724	-	100	91.895	Cebus_capucinus
ENSCPOG00000007533	-	100	98.028	ENSCATG00000032673	-	100	98.028	Cercocebus_atys
ENSCPOG00000007533	-	100	98.357	ENSCLAG00000011094	-	100	98.357	Chinchilla_lanigera
ENSCPOG00000007533	-	100	98.028	ENSCSAG00000006297	-	100	98.028	Chlorocebus_sabaeus
ENSCPOG00000007533	-	55	81.467	ENSCHOG00000003120	-	88	81.467	Choloepus_hoffmanni
ENSCPOG00000007533	-	71	91.720	ENSCPBG00000012407	-	92	82.927	Chrysemys_picta_bellii
ENSCPOG00000007533	-	79	55.993	ENSCSAVG00000006744	-	96	56.667	Ciona_savignyi
ENSCPOG00000007533	-	100	98.028	ENSCANG00000033626	-	100	98.028	Colobus_angolensis_palliatus
ENSCPOG00000007533	-	100	97.700	ENSCGRG00001015265	EIF3C	100	97.700	Cricetulus_griseus_chok1gshd
ENSCPOG00000007533	-	100	74.672	ENSCSEG00000017770	eif3c	100	74.672	Cynoglossus_semilaevis
ENSCPOG00000007533	-	99	75.490	ENSCVAG00000005402	eif3c	98	81.656	Cyprinodon_variegatus
ENSCPOG00000007533	-	99	76.144	ENSDARG00000016443	eif3c	98	75.952	Danio_rerio
ENSCPOG00000007533	-	100	98.248	ENSDNOG00000031497	-	100	98.248	Dasypus_novemcinctus
ENSCPOG00000007533	-	100	99.124	ENSDORG00000016471	Eif3c	100	99.124	Dipodomys_ordii
ENSCPOG00000007533	-	66	57.355	FBgn0034258	eIF3c	95	50.332	Drosophila_melanogaster
ENSCPOG00000007533	-	92	98.165	ENSETEG00000013527	-	92	98.165	Echinops_telfairi
ENSCPOG00000007533	-	99	63.197	ENSEBUG00000001629	eif3c	99	63.724	Eptatretus_burgeri
ENSCPOG00000007533	-	100	98.357	ENSECAG00000008746	-	100	98.357	Equus_caballus
ENSCPOG00000007533	-	64	64.456	ENSEEUG00000000726	-	64	64.456	Erinaceus_europaeus
ENSCPOG00000007533	-	87	97.243	ENSEEUG00000006148	-	100	97.243	Erinaceus_europaeus
ENSCPOG00000007533	-	99	75.734	ENSELUG00000022257	eif3c	92	83.416	Esox_lucius
ENSCPOG00000007533	-	100	98.467	ENSFCAG00000015782	-	100	98.467	Felis_catus
ENSCPOG00000007533	-	100	98.795	ENSFDAG00000003588	-	100	98.795	Fukomys_damarensis
ENSCPOG00000007533	-	99	76.356	ENSFHEG00000014154	EIF3C	93	83.660	Fundulus_heteroclitus
ENSCPOG00000007533	-	97	74.776	ENSGMOG00000016885	eif3c	99	75.112	Gadus_morhua
ENSCPOG00000007533	-	96	76.644	ENSGACG00000007652	eif3c	100	75.682	Gasterosteus_aculeatus
ENSCPOG00000007533	-	92	83.707	ENSGAGG00000006666	-	100	83.825	Gopherus_agassizii
ENSCPOG00000007533	-	54	96.911	ENSGGOG00000022677	-	100	96.911	Gorilla_gorilla
ENSCPOG00000007533	-	99	95.600	ENSGGOG00000026919	EIF3C	100	97.838	Gorilla_gorilla
ENSCPOG00000007533	-	100	98.795	ENSHGLG00000011445	EIF3C	100	98.795	Heterocephalus_glaber_female
ENSCPOG00000007533	-	100	98.795	ENSHGLG00100000217	EIF3C	100	98.795	Heterocephalus_glaber_male
ENSCPOG00000007533	-	99	76.004	ENSHCOG00000019694	eif3c	98	75.791	Hippocampus_comes
ENSCPOG00000007533	-	99	75.570	ENSIPUG00000016878	eif3c	98	76.279	Ictalurus_punctatus
ENSCPOG00000007533	-	100	98.686	ENSSTOG00000021278	-	100	98.686	Ictidomys_tridecemlineatus
ENSCPOG00000007533	-	100	97.700	ENSJJAG00000012722	Eif3c	100	97.700	Jaculus_jaculus
ENSCPOG00000007533	-	99	76.780	ENSKMAG00000021662	eif3c	97	75.705	Kryptolebias_marmoratus
ENSCPOG00000007533	-	99	75.249	ENSLBEG00000023370	eif3c	99	74.973	Labrus_bergylta
ENSCPOG00000007533	-	100	78.735	ENSLACG00000000770	eif3c	100	80.196	Latimeria_chalumnae
ENSCPOG00000007533	-	100	97.700	ENSLAFG00000027426	-	100	97.700	Loxodonta_africana
ENSCPOG00000007533	-	100	98.028	ENSMFAG00000041930	-	100	98.028	Macaca_fascicularis
ENSCPOG00000007533	-	100	98.028	ENSMMUG00000011798	-	100	98.028	Macaca_mulatta
ENSCPOG00000007533	-	100	98.028	ENSMNEG00000023915	-	100	98.028	Macaca_nemestrina
ENSCPOG00000007533	-	100	98.028	ENSMLEG00000027529	-	100	98.028	Mandrillus_leucophaeus
ENSCPOG00000007533	-	99	75.777	ENSMAMG00000012512	eif3c	95	84.667	Mastacembelus_armatus
ENSCPOG00000007533	-	84	83.471	ENSMZEG00005013699	eif3c	94	83.471	Maylandia_zebra
ENSCPOG00000007533	-	84	80.782	ENSMZEG00005013685	eif3c	92	80.782	Maylandia_zebra
ENSCPOG00000007533	-	100	97.590	ENSMAUG00000010621	Eif3c	100	97.590	Mesocricetus_auratus
ENSCPOG00000007533	-	100	98.248	ENSMICG00000036748	-	100	98.248	Microcebus_murinus
ENSCPOG00000007533	-	100	95.509	ENSMOCG00000004204	Eif3c	100	95.509	Microtus_ochrogaster
ENSCPOG00000007533	-	100	72.210	ENSMMOG00000001572	eif3c	72	82.673	Mola_mola
ENSCPOG00000007533	-	100	95.186	ENSMODG00000015579	-	100	95.186	Monodelphis_domestica
ENSCPOG00000007533	-	84	84.577	ENSMALG00000008907	eif3c	92	84.437	Monopterus_albus
ENSCPOG00000007533	-	100	97.481	MGP_CAROLIEiJ_G0030451	Eif3c	100	97.481	Mus_caroli
ENSCPOG00000007533	-	100	97.481	ENSMUSG00000030738	Eif3c	100	97.481	Mus_musculus
ENSCPOG00000007533	-	100	96.824	MGP_PahariEiJ_G0013661	Eif3c	100	96.824	Mus_pahari
ENSCPOG00000007533	-	100	97.481	MGP_SPRETEiJ_G0031565	Eif3c	100	97.481	Mus_spretus
ENSCPOG00000007533	-	96	97.955	ENSMPUG00000012732	-	100	97.955	Mustela_putorius_furo
ENSCPOG00000007533	-	100	97.700	ENSMLUG00000015558	-	100	97.700	Myotis_lucifugus
ENSCPOG00000007533	-	93	87.273	ENSNGAG00000010901	-	98	87.273	Nannospalax_galili
ENSCPOG00000007533	-	100	98.686	ENSNGAG00000007177	-	100	98.686	Nannospalax_galili
ENSCPOG00000007533	-	100	83.064	ENSNLEG00000001425	-	91	93.333	Nomascus_leucogenys
ENSCPOG00000007533	-	100	78.033	ENSMEUG00000009939	-	99	78.275	Notamacropus_eugenii
ENSCPOG00000007533	-	89	64.557	ENSMEUG00000005317	-	100	62.025	Notamacropus_eugenii
ENSCPOG00000007533	-	100	98.138	ENSOPRG00000000931	-	100	98.138	Ochotona_princeps
ENSCPOG00000007533	-	100	98.795	ENSODEG00000013508	-	100	98.795	Octodon_degus
ENSCPOG00000007533	-	66	63.366	ENSONIG00000011434	eif3c	99	63.366	Oreochromis_niloticus
ENSCPOG00000007533	-	100	91.379	ENSOANG00000011410	-	100	91.379	Ornithorhynchus_anatinus
ENSCPOG00000007533	-	100	98.795	ENSOCUG00000022489	-	100	98.795	Oryctolagus_cuniculus
ENSCPOG00000007533	-	99	75.277	ENSORLG00000006318	eif3c	98	72.260	Oryzias_latipes
ENSCPOG00000007533	-	99	75.277	ENSORLG00020015713	eif3c	96	82.881	Oryzias_latipes_hni
ENSCPOG00000007533	-	99	75.388	ENSORLG00015013772	eif3c	97	74.724	Oryzias_latipes_hsok
ENSCPOG00000007533	-	100	74.651	ENSOMEG00000020450	eif3c	100	74.329	Oryzias_melastigma
ENSCPOG00000007533	-	100	98.357	ENSOGAG00000012737	-	100	98.357	Otolemur_garnettii
ENSCPOG00000007533	-	100	98.138	ENSOARG00000002892	-	100	98.138	Ovis_aries
ENSCPOG00000007533	-	100	98.467	ENSPPRG00000012336	-	100	98.467	Panthera_pardus
ENSCPOG00000007533	-	100	98.467	ENSPTIG00000011712	-	100	98.467	Panthera_tigris_altaica
ENSCPOG00000007533	-	100	98.028	ENSPANG00000021151	-	100	98.028	Papio_anubis
ENSCPOG00000007533	-	99	76.471	ENSPKIG00000002049	eif3c	98	77.015	Paramormyrops_kingsleyae
ENSCPOG00000007533	-	89	84.743	ENSPMGG00000005409	eif3c	94	84.743	Periophthalmus_magnuspinnatus
ENSCPOG00000007533	-	100	96.386	ENSPEMG00000010899	Eif3c	100	96.386	Peromyscus_maniculatus_bairdii
ENSCPOG00000007533	-	100	95.295	ENSPCIG00000025206	-	100	95.295	Phascolarctos_cinereus
ENSCPOG00000007533	-	99	75.679	ENSPFOG00000004476	eif3c	98	75.326	Poecilia_formosa
ENSCPOG00000007533	-	100	71.725	ENSPLAG00000017480	eif3c	92	83.582	Poecilia_latipinna
ENSCPOG00000007533	-	99	76.304	ENSPMEG00000019512	eif3c	98	75.517	Poecilia_mexicana
ENSCPOG00000007533	-	100	94.852	ENSPPYG00000007227	-	100	94.852	Pongo_abelii
ENSCPOG00000007533	-	66	98.170	ENSPCAG00000012710	-	100	98.170	Procavia_capensis
ENSCPOG00000007533	-	100	98.686	ENSPCOG00000019289	-	100	98.686	Propithecus_coquereli
ENSCPOG00000007533	-	100	98.138	ENSPVAG00000005804	-	100	98.138	Pteropus_vampyrus
ENSCPOG00000007533	-	50	81.212	ENSPNYG00000016530	eif3c	81	81.212	Pundamilia_nyererei
ENSCPOG00000007533	-	99	76.696	ENSPNAG00000024040	eif3c	99	76.940	Pygocentrus_nattereri
ENSCPOG00000007533	-	100	97.152	ENSRNOG00000018761	Eif3c	100	97.152	Rattus_norvegicus
ENSCPOG00000007533	-	97	97.961	ENSRBIG00000044009	-	98	95.536	Rhinopithecus_bieti
ENSCPOG00000007533	-	100	98.028	ENSRROG00000043626	-	100	98.028	Rhinopithecus_roxellana
ENSCPOG00000007533	-	77	31.181	YMR309C	-	81	30.515	Saccharomyces_cerevisiae
ENSCPOG00000007533	-	100	97.809	ENSSBOG00000032155	-	100	97.809	Saimiri_boliviensis_boliviensis
ENSCPOG00000007533	-	96	94.790	ENSSHAG00000011808	-	100	94.790	Sarcophilus_harrisii
ENSCPOG00000007533	-	99	75.847	ENSSFOG00015021823	eif3c	98	76.393	Scleropages_formosus
ENSCPOG00000007533	-	97	76.966	ENSSMAG00000016638	eif3c	97	76.854	Scophthalmus_maximus
ENSCPOG00000007533	-	97	79.124	ENSSDUG00000023117	eif3c	98	76.362	Seriola_dumerili
ENSCPOG00000007533	-	99	76.030	ENSSLDG00000009706	eif3c	93	83.660	Seriola_lalandi_dorsalis
ENSCPOG00000007533	-	100	84.044	ENSSPUG00000016470	-	100	85.027	Sphenodon_punctatus
ENSCPOG00000007533	-	100	75.758	ENSSPAG00000000426	eif3c	100	75.978	Stegastes_partitus
ENSCPOG00000007533	-	100	98.467	ENSSSCG00000034927	-	100	98.467	Sus_scrofa
ENSCPOG00000007533	-	99	74.062	ENSTRUG00000008951	eif3c	99	74.277	Takifugu_rubripes
ENSCPOG00000007533	-	100	73.913	ENSTNIG00000015210	eif3c	100	74.783	Tetraodon_nigroviridis
ENSCPOG00000007533	-	100	98.138	ENSTTRG00000005880	-	100	98.138	Tursiops_truncatus
ENSCPOG00000007533	-	72	98.779	ENSUAMG00000001127	-	91	99.682	Ursus_americanus
ENSCPOG00000007533	-	100	98.686	ENSUMAG00000010927	-	100	98.686	Ursus_maritimus
ENSCPOG00000007533	-	100	97.043	ENSVVUG00000025970	-	100	97.043	Vulpes_vulpes
ENSCPOG00000007533	-	100	78.186	ENSXETG00000002941	eif3c	100	78.749	Xenopus_tropicalis
ENSCPOG00000007533	-	100	75.594	ENSXMAG00000013796	eif3c	100	74.946	Xiphophorus_maculatus