EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000007815 (Gene tree)
Gene ID: 100720310
Gene Symbol: RBM12B
Alias: -
Full Name: RNA binding motif protein 12B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 2859 bases
Position: chrDS562855.1:21646638-21649496
Accession: 100720310
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007038	RRM_1	PF00076.22	3.9e-29	1	2
ENSCPOP00000007038	RRM_1	PF00076.22	3.9e-29	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000007890	RBM12B-201	2859	XM_005008236	ENSCPOP00000007038	952 (aa)	XP_005008293	H0VAY0

Gene Model

Click here to download ENSCPOG00000007815's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000007815's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000007815	RBM12B	54	71.264	ENSCPOG00000035170	RBM12	52	71.264

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000007815	RBM12B	100	82.318	ENSG00000183808	RBM12B	100	97.561	Homo_sapiens
ENSCPOG00000007815	RBM12B	59	48.052	ENSAPOG00000013963	rbm12b	87	48.052	Acanthochromis_polyacanthus
ENSCPOG00000007815	RBM12B	100	76.681	ENSAMEG00000007134	RBM12B	100	77.206	Ailuropoda_melanoleuca
ENSCPOG00000007815	RBM12B	51	40.041	ENSACIG00000014943	rbm12b	99	40.952	Amphilophus_citrinellus
ENSCPOG00000007815	RBM12B	59	50.649	ENSAOCG00000024270	rbm12b	87	50.649	Amphiprion_ocellaris
ENSCPOG00000007815	RBM12B	58	47.761	ENSAPEG00000022079	rbm12b	98	40.752	Amphiprion_percula
ENSCPOG00000007815	RBM12B	51	47.500	ENSATEG00000001886	zgc:153215	75	47.500	Anabas_testudineus
ENSCPOG00000007815	RBM12B	59	46.753	ENSATEG00000004578	rbm12b	85	46.753	Anabas_testudineus
ENSCPOG00000007815	RBM12B	76	61.745	ENSAPLG00000002020	RBM12B	100	61.745	Anas_platyrhynchos
ENSCPOG00000007815	RBM12B	100	36.801	ENSACAG00000003463	RBM12B	100	36.801	Anolis_carolinensis
ENSCPOG00000007815	RBM12B	92	82.628	ENSANAG00000034015	RBM12B	98	81.403	Aotus_nancymaae
ENSCPOG00000007815	RBM12B	57	48.052	ENSACLG00000005578	rbm12b	84	48.052	Astatotilapia_calliptera
ENSCPOG00000007815	RBM12B	62	48.052	ENSACLG00000005575	rbm12b	88	48.052	Astatotilapia_calliptera
ENSCPOG00000007815	RBM12B	59	42.857	ENSAMXG00000041973	rbm12b	87	42.857	Astyanax_mexicanus
ENSCPOG00000007815	RBM12B	100	77.206	ENSBTAG00000013408	RBM12B	100	78.384	Bos_taurus
ENSCPOG00000007815	RBM12B	100	80.584	ENSCAFG00000009109	RBM12B	100	78.322	Canis_familiaris
ENSCPOG00000007815	RBM12B	100	75.525	ENSCAFG00020012203	RBM12B	100	79.517	Canis_lupus_dingo
ENSCPOG00000007815	RBM12B	88	82.110	ENSCHIG00000006790	RBM12B	89	82.110	Capra_hircus
ENSCPOG00000007815	RBM12B	100	82.538	ENSTSYG00000012515	RBM12B	100	82.234	Carlito_syrichta
ENSCPOG00000007815	RBM12B	100	100.000	ENSCAPG00000003543	RBM12B	100	100.000	Cavia_aperea
ENSCPOG00000007815	RBM12B	100	72.071	ENSCATG00000030769	RBM12B	100	79.014	Cercocebus_atys
ENSCPOG00000007815	RBM12B	100	95.693	ENSCLAG00000017617	RBM12B	100	95.693	Chinchilla_lanigera
ENSCPOG00000007815	RBM12B	100	82.218	ENSCSAG00000018559	RBM12B	100	79.021	Chlorocebus_sabaeus
ENSCPOG00000007815	RBM12B	99	82.384	ENSCHOG00000008934	RBM12B	100	82.489	Choloepus_hoffmanni
ENSCPOG00000007815	RBM12B	75	61.184	ENSCPBG00000003061	RBM12B	100	61.184	Chrysemys_picta_bellii
ENSCPOG00000007815	RBM12B	100	71.996	ENSCANG00000030379	RBM12B	100	79.119	Colobus_angolensis_palliatus
ENSCPOG00000007815	RBM12B	100	69.255	ENSCGRG00001008710	-	97	70.724	Cricetulus_griseus_chok1gshd
ENSCPOG00000007815	RBM12B	59	48.052	ENSCSEG00000004610	rbm12b	82	48.052	Cynoglossus_semilaevis
ENSCPOG00000007815	RBM12B	51	33.333	ENSCVAG00000009259	-	98	33.333	Cyprinodon_variegatus
ENSCPOG00000007815	RBM12B	59	49.351	ENSCVAG00000011047	rbm12b	86	49.351	Cyprinodon_variegatus
ENSCPOG00000007815	RBM12B	61	42.857	ENSDARG00000079717	rbm12b	81	42.857	Danio_rerio
ENSCPOG00000007815	RBM12B	100	79.582	ENSDNOG00000041608	RBM12B	100	79.681	Dasypus_novemcinctus
ENSCPOG00000007815	RBM12B	100	80.918	ENSDORG00000024034	-	100	80.918	Dipodomys_ordii
ENSCPOG00000007815	RBM12B	67	71.698	ENSETEG00000013005	-	85	72.484	Echinops_telfairi
ENSCPOG00000007815	RBM12B	100	78.069	ENSEASG00005016297	RBM12B	100	80.147	Equus_asinus_asinus
ENSCPOG00000007815	RBM12B	100	82.618	ENSECAG00000017870	RBM12B	100	82.190	Equus_caballus
ENSCPOG00000007815	RBM12B	100	74.607	ENSFCAG00000029274	RBM12B	100	78.676	Felis_catus
ENSCPOG00000007815	RBM12B	77	59.060	ENSFALG00000014893	RBM12B	100	59.060	Ficedula_albicollis
ENSCPOG00000007815	RBM12B	100	92.970	ENSFDAG00000005576	RBM12B	97	92.970	Fukomys_damarensis
ENSCPOG00000007815	RBM12B	59	49.351	ENSFHEG00000016425	rbm12b	86	49.351	Fundulus_heteroclitus
ENSCPOG00000007815	RBM12B	50	30.372	ENSFHEG00000014539	zgc:153215	96	30.372	Fundulus_heteroclitus
ENSCPOG00000007815	RBM12B	61	45.333	ENSGMOG00000013467	rbm12b	90	45.333	Gadus_morhua
ENSCPOG00000007815	RBM12B	76	60.403	ENSGALG00000035129	RBM12B	100	60.403	Gallus_gallus
ENSCPOG00000007815	RBM12B	50	31.189	ENSGAFG00000007845	zgc:153215	98	31.189	Gambusia_affinis
ENSCPOG00000007815	RBM12B	60	49.351	ENSGAFG00000007224	rbm12b	87	49.351	Gambusia_affinis
ENSCPOG00000007815	RBM12B	60	45.455	ENSGACG00000008682	rbm12b	86	45.455	Gasterosteus_aculeatus
ENSCPOG00000007815	RBM12B	73	64.662	ENSGAGG00000009774	RBM12B	100	64.662	Gopherus_agassizii
ENSCPOG00000007815	RBM12B	100	75.551	ENSGGOG00000011909	RBM12B	100	79.727	Gorilla_gorilla
ENSCPOG00000007815	RBM12B	60	48.052	ENSHBUG00000016227	rbm12b	84	48.052	Haplochromis_burtoni
ENSCPOG00000007815	RBM12B	100	93.340	ENSHGLG00000009063	RBM12B	100	93.340	Heterocephalus_glaber_female
ENSCPOG00000007815	RBM12B	100	93.340	ENSHGLG00100021324	RBM12B	100	93.340	Heterocephalus_glaber_male
ENSCPOG00000007815	RBM12B	64	41.667	ENSHCOG00000014952	rbm12b	97	41.667	Hippocampus_comes
ENSCPOG00000007815	RBM12B	60	48.315	ENSIPUG00000001167	RBM12B	85	48.315	Ictalurus_punctatus
ENSCPOG00000007815	RBM12B	51	31.193	ENSIPUG00000019731	zgc:153215	99	31.193	Ictalurus_punctatus
ENSCPOG00000007815	RBM12B	100	73.424	ENSSTOG00000027445	RBM12B	100	81.831	Ictidomys_tridecemlineatus
ENSCPOG00000007815	RBM12B	100	73.452	ENSJJAG00000004165	-	100	76.495	Jaculus_jaculus
ENSCPOG00000007815	RBM12B	59	48.684	ENSKMAG00000013715	rbm12b	86	48.684	Kryptolebias_marmoratus
ENSCPOG00000007815	RBM12B	59	48.684	ENSKMAG00000013704	rbm12b	83	48.684	Kryptolebias_marmoratus
ENSCPOG00000007815	RBM12B	67	54.412	ENSLACG00000007177	RBM12B	99	54.412	Latimeria_chalumnae
ENSCPOG00000007815	RBM12B	59	50.649	ENSLOCG00000018344	rbm12b	86	50.649	Lepisosteus_oculatus
ENSCPOG00000007815	RBM12B	100	70.724	ENSLAFG00000029949	RBM12B	100	72.193	Loxodonta_africana
ENSCPOG00000007815	RBM12B	100	71.473	ENSMFAG00000045430	RBM12B	100	79.224	Macaca_fascicularis
ENSCPOG00000007815	RBM12B	100	82.218	ENSMMUG00000005558	RBM12B	100	81.408	Macaca_mulatta
ENSCPOG00000007815	RBM12B	100	71.473	ENSMNEG00000041292	RBM12B	100	79.224	Macaca_nemestrina
ENSCPOG00000007815	RBM12B	100	76.786	ENSMLEG00000037288	RBM12B	100	80.063	Mandrillus_leucophaeus
ENSCPOG00000007815	RBM12B	59	50.649	ENSMAMG00000011998	rbm12b	87	50.649	Mastacembelus_armatus
ENSCPOG00000007815	RBM12B	62	48.052	ENSMZEG00005015005	rbm12b	90	48.052	Maylandia_zebra
ENSCPOG00000007815	RBM12B	62	48.052	ENSMZEG00005014845	rbm12b	89	47.297	Maylandia_zebra
ENSCPOG00000007815	RBM12B	52	57.447	ENSMGAG00000011985	RBM12B	99	57.752	Meleagris_gallopavo
ENSCPOG00000007815	RBM12B	100	73.082	ENSMAUG00000021752	-	100	71.354	Mesocricetus_auratus
ENSCPOG00000007815	RBM12B	100	80.108	ENSMICG00000036969	RBM12B	100	78.256	Microcebus_murinus
ENSCPOG00000007815	RBM12B	100	65.828	ENSMOCG00000005603	-	100	68.449	Microtus_ochrogaster
ENSCPOG00000007815	RBM12B	69	37.702	ENSMMOG00000002404	rbm12b	94	37.702	Mola_mola
ENSCPOG00000007815	RBM12B	90	64.715	ENSMODG00000007436	RBM12B	98	65.506	Monodelphis_domestica
ENSCPOG00000007815	RBM12B	64	51.282	ENSMALG00000012059	rbm12b	92	51.282	Monopterus_albus
ENSCPOG00000007815	RBM12B	100	65.340	ENSMUSG00000046667	Rbm12b1	100	66.911	Mus_musculus
ENSCPOG00000007815	RBM12B	100	64.084	ENSMUSG00000052137	Rbm12b2	100	67.120	Mus_musculus
ENSCPOG00000007815	RBM12B	100	70.668	MGP_SPRETEiJ_G0026765	-	100	70.772	Mus_spretus
ENSCPOG00000007815	RBM12B	100	64.607	MGP_SPRETEiJ_G0026766	-	100	67.644	Mus_spretus
ENSCPOG00000007815	RBM12B	100	81.419	ENSMPUG00000018637	RBM12B	100	77.223	Mustela_putorius_furo
ENSCPOG00000007815	RBM12B	100	74.536	ENSMLUG00000002359	RBM12B	100	74.948	Myotis_lucifugus
ENSCPOG00000007815	RBM12B	100	81.132	ENSNGAG00000002801	-	100	81.532	Nannospalax_galili
ENSCPOG00000007815	RBM12B	62	48.052	ENSNBRG00000015057	rbm12b	90	48.052	Neolamprologus_brichardi
ENSCPOG00000007815	RBM12B	100	75.812	ENSNLEG00000032050	RBM12B	100	80.693	Nomascus_leucogenys
ENSCPOG00000007815	RBM12B	100	93.908	ENSODEG00000019204	RBM12B	100	93.908	Octodon_degus
ENSCPOG00000007815	RBM12B	62	48.052	ENSONIG00000020612	rbm12b	90	48.052	Oreochromis_niloticus
ENSCPOG00000007815	RBM12B	77	67.114	ENSOANG00000015735	-	97	67.114	Ornithorhynchus_anatinus
ENSCPOG00000007815	RBM12B	100	76.705	ENSOCUG00000010353	RBM12B	100	79.853	Oryctolagus_cuniculus
ENSCPOG00000007815	RBM12B	63	50.649	ENSORLG00000008228	rbm12b	85	50.649	Oryzias_latipes
ENSCPOG00000007815	RBM12B	61	50.649	ENSORLG00020013619	rbm12b	85	50.649	Oryzias_latipes_hni
ENSCPOG00000007815	RBM12B	61	50.649	ENSORLG00015019999	rbm12b	85	50.649	Oryzias_latipes_hsok
ENSCPOG00000007815	RBM12B	59	51.948	ENSOMEG00000022523	rbm12b	83	51.948	Oryzias_melastigma
ENSCPOG00000007815	RBM12B	100	82.556	ENSOGAG00000002979	RBM12B	100	82.556	Otolemur_garnettii
ENSCPOG00000007815	RBM12B	100	73.480	ENSPTIG00000020071	RBM12B	100	78.782	Panthera_tigris_altaica
ENSCPOG00000007815	RBM12B	100	76.261	ENSPTRG00000020420	RBM12B	100	81.303	Pan_troglodytes
ENSCPOG00000007815	RBM12B	100	76.891	ENSPANG00000035535	RBM12B	100	80.168	Papio_anubis
ENSCPOG00000007815	RBM12B	51	33.140	ENSPKIG00000014851	zgc:153215	99	33.140	Paramormyrops_kingsleyae
ENSCPOG00000007815	RBM12B	59	49.351	ENSPKIG00000018719	rbm12b	85	49.351	Paramormyrops_kingsleyae
ENSCPOG00000007815	RBM12B	73	65.185	ENSPSIG00000001348	RBM12B	100	65.185	Pelodiscus_sinensis
ENSCPOG00000007815	RBM12B	100	72.088	ENSPEMG00000008279	-	100	73.452	Peromyscus_maniculatus_bairdii
ENSCPOG00000007815	RBM12B	99	68.261	ENSPCIG00000008556	RBM12B	100	68.261	Phascolarctos_cinereus
ENSCPOG00000007815	RBM12B	62	44.554	ENSPFOG00000020937	rbm12b	87	44.554	Poecilia_formosa
ENSCPOG00000007815	RBM12B	62	44.554	ENSPLAG00000018782	rbm12b	90	44.554	Poecilia_latipinna
ENSCPOG00000007815	RBM12B	62	44.554	ENSPMEG00000011418	rbm12b	90	44.554	Poecilia_mexicana
ENSCPOG00000007815	RBM12B	61	44.554	ENSPREG00000020770	rbm12b	89	44.554	Poecilia_reticulata
ENSCPOG00000007815	RBM12B	51	30.485	ENSPREG00000018608	zgc:153215	99	30.485	Poecilia_reticulata
ENSCPOG00000007815	RBM12B	100	82.418	ENSPPYG00000018745	RBM12B	100	80.519	Pongo_abelii
ENSCPOG00000007815	RBM12B	100	76.471	ENSPCOG00000023546	RBM12B	100	81.092	Propithecus_coquereli
ENSCPOG00000007815	RBM12B	100	79.855	ENSPVAG00000011803	RBM12B	100	81.197	Pteropus_vampyrus
ENSCPOG00000007815	RBM12B	62	48.052	ENSPNYG00000016696	rbm12b	90	48.052	Pundamilia_nyererei
ENSCPOG00000007815	RBM12B	51	32.374	ENSPNAG00000025628	zgc:153215	99	32.374	Pygocentrus_nattereri
ENSCPOG00000007815	RBM12B	59	49.351	ENSPNAG00000008126	rbm12b	84	49.351	Pygocentrus_nattereri
ENSCPOG00000007815	RBM12B	100	69.108	ENSRNOG00000016330	Rbm12b	100	66.458	Rattus_norvegicus
ENSCPOG00000007815	RBM12B	90	69.108	ENSRNOG00000055292	LOC679087	100	65.698	Rattus_norvegicus
ENSCPOG00000007815	RBM12B	100	76.495	ENSRBIG00000035046	RBM12B	100	80.483	Rhinopithecus_bieti
ENSCPOG00000007815	RBM12B	100	71.174	ENSRROG00000023660	RBM12B	100	77.731	Rhinopithecus_roxellana
ENSCPOG00000007815	RBM12B	100	77.521	ENSSBOG00000027592	RBM12B	100	80.147	Saimiri_boliviensis_boliviensis
ENSCPOG00000007815	RBM12B	98	66.957	ENSSHAG00000015335	RBM12B	100	66.957	Sarcophilus_harrisii
ENSCPOG00000007815	RBM12B	59	46.753	ENSSFOG00015001584	rbm12b	86	46.753	Scleropages_formosus
ENSCPOG00000007815	RBM12B	51	33.929	ENSSFOG00015009427	zgc:153215	99	33.929	Scleropages_formosus
ENSCPOG00000007815	RBM12B	60	49.351	ENSSMAG00000019708	rbm12b	88	49.351	Scophthalmus_maximus
ENSCPOG00000007815	RBM12B	59	49.351	ENSSDUG00000006856	rbm12b	86	49.351	Seriola_dumerili
ENSCPOG00000007815	RBM12B	51	50.000	ENSSLDG00000013581	zgc:153215	82	41.463	Seriola_lalandi_dorsalis
ENSCPOG00000007815	RBM12B	59	49.351	ENSSLDG00000016156	rbm12b	86	49.351	Seriola_lalandi_dorsalis
ENSCPOG00000007815	RBM12B	81	78.115	ENSSARG00000011845	-	84	78.115	Sorex_araneus
ENSCPOG00000007815	RBM12B	51	56.371	ENSSPUG00000016954	RBM12B	91	56.371	Sphenodon_punctatus
ENSCPOG00000007815	RBM12B	60	49.351	ENSSPAG00000006774	rbm12b	88	49.351	Stegastes_partitus
ENSCPOG00000007815	RBM12B	100	82.150	ENSSSCG00000006110	RBM12B	100	80.832	Sus_scrofa
ENSCPOG00000007815	RBM12B	53	55.340	ENSTGUG00000011860	RBM12B	100	55.340	Taeniopygia_guttata
ENSCPOG00000007815	RBM12B	59	49.351	ENSTRUG00000013738	rbm12b	87	49.351	Takifugu_rubripes
ENSCPOG00000007815	RBM12B	83	82.547	ENSTBEG00000000449	RBM12B	82	82.547	Tupaia_belangeri
ENSCPOG00000007815	RBM12B	100	76.786	ENSUAMG00000023639	RBM12B	100	80.567	Ursus_americanus
ENSCPOG00000007815	RBM12B	100	80.987	ENSUMAG00000016008	RBM12B	100	81.828	Ursus_maritimus
ENSCPOG00000007815	RBM12B	88	90.378	ENSVPAG00000001080	RBM12B	90	90.378	Vicugna_pacos
ENSCPOG00000007815	RBM12B	100	75.840	ENSVVUG00000002694	RBM12B	100	79.202	Vulpes_vulpes
ENSCPOG00000007815	RBM12B	52	30.103	ENSXETG00000025920	-	97	30.103	Xenopus_tropicalis
ENSCPOG00000007815	RBM12B	72	46.845	ENSXETG00000014694	rbm12b	100	47.639	Xenopus_tropicalis
ENSCPOG00000007815	RBM12B	64	42.466	ENSXETG00000014696	rbm12b	88	40.230	Xenopus_tropicalis
ENSCPOG00000007815	RBM12B	51	31.589	ENSXCOG00000019654	zgc:153215	98	31.589	Xiphophorus_couchianus
ENSCPOG00000007815	RBM12B	62	45.545	ENSXMAG00000014213	rbm12b	90	45.545	Xiphophorus_maculatus