EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000007849 (Gene tree)
Gene ID: 100735013
Gene Symbol: TRNT1
Alias: CCA1|CGI-47|MtCCA
Full Name: tRNA nucleotidyl transferase 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 23088 bases
Position: chrDS562871.1:30342354-30365441
Accession: 100735013
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007066	PolyA_pol	PF01743.20	3.4e-33	1	1
ENSCPOP00000023324	PolyA_pol	PF01743.20	9.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000043384	TRNT1-202	2350	-	ENSCPOP00000023324	134 (aa)	-	A0A286XD29
ENSCPOT00000007924	TRNT1-201	1902	XM_003473448	ENSCPOP00000007066	434 (aa)	XP_003473496	H0VB05

Gene Model

Click here to download ENSCPOG00000007849's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000007849's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000007849	TRNT1	99	92.148	ENSG00000072756	TRNT1	99	92.148	Homo_sapiens
ENSCPOG00000007849	TRNT1	98	65.330	ENSAPOG00000013687	trnt1	99	65.330	Acanthochromis_polyacanthus
ENSCPOG00000007849	TRNT1	100	90.299	ENSAMEG00000014520	TRNT1	99	90.345	Ailuropoda_melanoleuca
ENSCPOG00000007849	TRNT1	98	67.529	ENSACIG00000021706	trnt1	99	67.529	Amphilophus_citrinellus
ENSCPOG00000007849	TRNT1	98	66.353	ENSAOCG00000024612	trnt1	99	66.353	Amphiprion_ocellaris
ENSCPOG00000007849	TRNT1	96	59.952	ENSAPEG00000022627	trnt1	97	59.952	Amphiprion_percula
ENSCPOG00000007849	TRNT1	93	69.479	ENSATEG00000008928	trnt1	99	69.479	Anabas_testudineus
ENSCPOG00000007849	TRNT1	89	74.677	ENSAPLG00000004258	TRNT1	96	74.677	Anas_platyrhynchos
ENSCPOG00000007849	TRNT1	99	73.672	ENSACAG00000005657	TRNT1	99	73.672	Anolis_carolinensis
ENSCPOG00000007849	TRNT1	99	91.917	ENSANAG00000024802	TRNT1	99	91.917	Aotus_nancymaae
ENSCPOG00000007849	TRNT1	98	67.294	ENSACLG00000022227	trnt1	99	67.294	Astatotilapia_calliptera
ENSCPOG00000007849	TRNT1	97	66.746	ENSAMXG00000003960	trnt1	97	66.746	Astyanax_mexicanus
ENSCPOG00000007849	TRNT1	99	90.069	ENSBTAG00000019534	TRNT1	99	90.069	Bos_taurus
ENSCPOG00000007849	TRNT1	79	61.682	WBGene00010089	hpo-31	94	43.373	Caenorhabditis_elegans
ENSCPOG00000007849	TRNT1	100	91.045	ENSCJAG00000015466	TRNT1	99	91.917	Callithrix_jacchus
ENSCPOG00000007849	TRNT1	99	90.069	ENSCAFG00000005985	TRNT1	99	90.069	Canis_familiaris
ENSCPOG00000007849	TRNT1	99	90.069	ENSCAFG00020014746	TRNT1	99	90.069	Canis_lupus_dingo
ENSCPOG00000007849	TRNT1	99	90.069	ENSCHIG00000007030	TRNT1	99	90.069	Capra_hircus
ENSCPOG00000007849	TRNT1	99	92.841	ENSTSYG00000013390	TRNT1	99	92.841	Carlito_syrichta
ENSCPOG00000007849	TRNT1	87	79.101	ENSCAPG00000006891	TRNT1	100	79.101	Cavia_aperea
ENSCPOG00000007849	TRNT1	95	88.916	ENSCCAG00000002919	TRNT1	99	91.000	Cebus_capucinus
ENSCPOG00000007849	TRNT1	100	91.935	ENSCATG00000031985	TRNT1	99	91.935	Cercocebus_atys
ENSCPOG00000007849	TRNT1	100	94.931	ENSCLAG00000005186	TRNT1	100	94.931	Chinchilla_lanigera
ENSCPOG00000007849	TRNT1	99	92.379	ENSCSAG00000011052	TRNT1	99	92.379	Chlorocebus_sabaeus
ENSCPOG00000007849	TRNT1	100	88.060	ENSCHOG00000005712	TRNT1	85	90.099	Choloepus_hoffmanni
ENSCPOG00000007849	TRNT1	94	79.853	ENSCPBG00000017636	TRNT1	93	79.853	Chrysemys_picta_bellii
ENSCPOG00000007849	TRNT1	78	60.000	ENSCING00000007069	-	99	44.769	Ciona_intestinalis
ENSCPOG00000007849	TRNT1	92	55.285	ENSCSAVG00000007494	-	99	44.575	Ciona_savignyi
ENSCPOG00000007849	TRNT1	99	92.148	ENSCANG00000039030	TRNT1	99	92.148	Colobus_angolensis_palliatus
ENSCPOG00000007849	TRNT1	99	90.300	ENSCGRG00001009998	Trnt1	99	90.300	Cricetulus_griseus_chok1gshd
ENSCPOG00000007849	TRNT1	99	90.300	ENSCGRG00000013410	Trnt1	99	90.300	Cricetulus_griseus_crigri
ENSCPOG00000007849	TRNT1	94	67.241	ENSCSEG00000008157	trnt1	95	67.241	Cynoglossus_semilaevis
ENSCPOG00000007849	TRNT1	95	68.116	ENSCVAG00000019770	trnt1	97	68.116	Cyprinodon_variegatus
ENSCPOG00000007849	TRNT1	97	67.780	ENSDARG00000075297	trnt1	96	67.780	Danio_rerio
ENSCPOG00000007849	TRNT1	99	89.607	ENSDNOG00000008837	TRNT1	99	89.607	Dasypus_novemcinctus
ENSCPOG00000007849	TRNT1	99	88.453	ENSDORG00000014035	Trnt1	99	88.453	Dipodomys_ordii
ENSCPOG00000007849	TRNT1	92	48.148	FBgn0037369	CG2100	83	48.148	Drosophila_melanogaster
ENSCPOG00000007849	TRNT1	86	88.696	ENSETEG00000018177	TRNT1	100	87.149	Echinops_telfairi
ENSCPOG00000007849	TRNT1	93	61.787	ENSEBUG00000012779	-	95	61.787	Eptatretus_burgeri
ENSCPOG00000007849	TRNT1	99	90.993	ENSEASG00005003577	TRNT1	99	90.993	Equus_asinus_asinus
ENSCPOG00000007849	TRNT1	99	91.224	ENSECAG00000014420	TRNT1	99	91.224	Equus_caballus
ENSCPOG00000007849	TRNT1	99	87.529	ENSEEUG00000009567	TRNT1	99	87.529	Erinaceus_europaeus
ENSCPOG00000007849	TRNT1	98	66.355	ENSELUG00000003802	trnt1	99	66.355	Esox_lucius
ENSCPOG00000007849	TRNT1	99	89.838	ENSFCAG00000026805	TRNT1	99	89.838	Felis_catus
ENSCPOG00000007849	TRNT1	88	73.958	ENSFALG00000013539	TRNT1	99	73.958	Ficedula_albicollis
ENSCPOG00000007849	TRNT1	100	93.779	ENSFDAG00000018412	TRNT1	100	93.779	Fukomys_damarensis
ENSCPOG00000007849	TRNT1	96	66.667	ENSFHEG00000019294	trnt1	99	66.667	Fundulus_heteroclitus
ENSCPOG00000007849	TRNT1	93	66.914	ENSGMOG00000007460	trnt1	95	66.914	Gadus_morhua
ENSCPOG00000007849	TRNT1	93	73.827	ENSGALG00000017368	TRNT1	94	73.827	Gallus_gallus
ENSCPOG00000007849	TRNT1	96	65.957	ENSGAFG00000008647	trnt1	99	65.957	Gambusia_affinis
ENSCPOG00000007849	TRNT1	98	64.706	ENSGACG00000011903	trnt1	99	64.706	Gasterosteus_aculeatus
ENSCPOG00000007849	TRNT1	99	77.209	ENSGAGG00000020942	TRNT1	97	77.209	Gopherus_agassizii
ENSCPOG00000007849	TRNT1	99	92.379	ENSGGOG00000015286	TRNT1	99	92.379	Gorilla_gorilla
ENSCPOG00000007849	TRNT1	98	67.294	ENSHBUG00000002797	trnt1	99	67.294	Haplochromis_burtoni
ENSCPOG00000007849	TRNT1	100	94.030	ENSHGLG00000003649	TRNT1	100	93.548	Heterocephalus_glaber_female
ENSCPOG00000007849	TRNT1	100	88.506	ENSHGLG00000000221	-	100	88.506	Heterocephalus_glaber_female
ENSCPOG00000007849	TRNT1	100	92.396	ENSHGLG00100016421	TRNT1	100	92.396	Heterocephalus_glaber_male
ENSCPOG00000007849	TRNT1	94	67.241	ENSHCOG00000010618	trnt1	95	67.241	Hippocampus_comes
ENSCPOG00000007849	TRNT1	96	67.711	ENSIPUG00000000971	trnt1	96	67.711	Ictalurus_punctatus
ENSCPOG00000007849	TRNT1	100	90.299	ENSSTOG00000000150	TRNT1	98	92.079	Ictidomys_tridecemlineatus
ENSCPOG00000007849	TRNT1	100	90.299	ENSJJAG00000018561	Trnt1	99	90.993	Jaculus_jaculus
ENSCPOG00000007849	TRNT1	96	66.745	ENSKMAG00000011307	trnt1	99	66.745	Kryptolebias_marmoratus
ENSCPOG00000007849	TRNT1	95	66.142	ENSLBEG00000019457	trnt1	97	62.439	Labrus_bergylta
ENSCPOG00000007849	TRNT1	100	70.896	ENSLACG00000013227	TRNT1	99	71.824	Latimeria_chalumnae
ENSCPOG00000007849	TRNT1	97	70.071	ENSLOCG00000011105	trnt1	95	70.071	Lepisosteus_oculatus
ENSCPOG00000007849	TRNT1	100	91.045	ENSLAFG00000023191	TRNT1	99	91.224	Loxodonta_africana
ENSCPOG00000007849	TRNT1	100	92.166	ENSMFAG00000045113	TRNT1	99	92.166	Macaca_fascicularis
ENSCPOG00000007849	TRNT1	100	92.166	ENSMMUG00000017983	TRNT1	99	92.166	Macaca_mulatta
ENSCPOG00000007849	TRNT1	100	92.166	ENSMNEG00000037805	TRNT1	99	92.166	Macaca_nemestrina
ENSCPOG00000007849	TRNT1	88	93.455	ENSMLEG00000033671	TRNT1	99	93.455	Mandrillus_leucophaeus
ENSCPOG00000007849	TRNT1	98	66.588	ENSMAMG00000023401	trnt1	99	66.588	Mastacembelus_armatus
ENSCPOG00000007849	TRNT1	98	67.294	ENSMZEG00005009141	trnt1	99	67.294	Maylandia_zebra
ENSCPOG00000007849	TRNT1	74	74.375	ENSMGAG00000009971	TRNT1	99	74.375	Meleagris_gallopavo
ENSCPOG00000007849	TRNT1	99	90.531	ENSMAUG00000020707	Trnt1	99	90.531	Mesocricetus_auratus
ENSCPOG00000007849	TRNT1	100	93.284	ENSMICG00000016615	TRNT1	99	92.148	Microcebus_murinus
ENSCPOG00000007849	TRNT1	99	89.838	ENSMOCG00000004539	Trnt1	99	89.838	Microtus_ochrogaster
ENSCPOG00000007849	TRNT1	94	67.734	ENSMMOG00000010742	trnt1	96	67.734	Mola_mola
ENSCPOG00000007849	TRNT1	100	84.328	ENSMODG00000004368	TRNT1	99	84.065	Monodelphis_domestica
ENSCPOG00000007849	TRNT1	98	65.176	ENSMALG00000008376	trnt1	99	65.176	Monopterus_albus
ENSCPOG00000007849	TRNT1	99	91.375	MGP_CAROLIEiJ_G0028698	Trnt1	99	91.375	Mus_caroli
ENSCPOG00000007849	TRNT1	99	91.375	ENSMUSG00000013736	Trnt1	99	91.375	Mus_musculus
ENSCPOG00000007849	TRNT1	99	90.069	MGP_PahariEiJ_G0022449	Trnt1	100	90.148	Mus_pahari
ENSCPOG00000007849	TRNT1	99	91.375	MGP_SPRETEiJ_G0029726	Trnt1	99	91.375	Mus_spretus
ENSCPOG00000007849	TRNT1	100	90.299	ENSMPUG00000017017	TRNT1	99	91.224	Mustela_putorius_furo
ENSCPOG00000007849	TRNT1	89	87.013	ENSMLUG00000011864	TRNT1	99	87.013	Myotis_lucifugus
ENSCPOG00000007849	TRNT1	100	91.045	ENSNGAG00000000537	Trnt1	99	91.224	Nannospalax_galili
ENSCPOG00000007849	TRNT1	95	67.717	ENSNBRG00000023606	trnt1	99	66.957	Neolamprologus_brichardi
ENSCPOG00000007849	TRNT1	99	92.610	ENSNLEG00000003226	TRNT1	99	92.610	Nomascus_leucogenys
ENSCPOG00000007849	TRNT1	100	83.582	ENSMEUG00000004684	TRNT1	99	83.834	Notamacropus_eugenii
ENSCPOG00000007849	TRNT1	88	78.385	ENSOPRG00000015067	TRNT1	99	78.385	Ochotona_princeps
ENSCPOG00000007849	TRNT1	100	94.030	ENSODEG00000007597	TRNT1	100	94.009	Octodon_degus
ENSCPOG00000007849	TRNT1	98	66.824	ENSONIG00000020273	trnt1	98	66.824	Oreochromis_niloticus
ENSCPOG00000007849	TRNT1	100	73.134	ENSOANG00000007514	TRNT1	99	73.843	Ornithorhynchus_anatinus
ENSCPOG00000007849	TRNT1	100	86.567	ENSOCUG00000008580	TRNT1	99	84.988	Oryctolagus_cuniculus
ENSCPOG00000007849	TRNT1	92	70.161	ENSORLG00000003165	trnt1	99	64.692	Oryzias_latipes
ENSCPOG00000007849	TRNT1	92	70.161	ENSORLG00020022060	trnt1	99	64.929	Oryzias_latipes_hni
ENSCPOG00000007849	TRNT1	92	70.161	ENSORLG00015018915	trnt1	99	64.218	Oryzias_latipes_hsok
ENSCPOG00000007849	TRNT1	97	66.154	ENSOMEG00000003331	trnt1	99	63.318	Oryzias_melastigma
ENSCPOG00000007849	TRNT1	99	89.838	ENSOARG00000008631	TRNT1	99	89.838	Ovis_aries
ENSCPOG00000007849	TRNT1	99	92.379	ENSPPAG00000043566	TRNT1	99	92.379	Pan_paniscus
ENSCPOG00000007849	TRNT1	100	89.552	ENSPPRG00000001327	TRNT1	99	89.838	Panthera_pardus
ENSCPOG00000007849	TRNT1	100	89.552	ENSPTIG00000011448	TRNT1	99	89.838	Panthera_tigris_altaica
ENSCPOG00000007849	TRNT1	99	92.379	ENSPTRG00000014564	TRNT1	99	92.379	Pan_troglodytes
ENSCPOG00000007849	TRNT1	100	91.935	ENSPANG00000025944	TRNT1	99	91.935	Papio_anubis
ENSCPOG00000007849	TRNT1	94	71.007	ENSPKIG00000020015	trnt1	94	71.007	Paramormyrops_kingsleyae
ENSCPOG00000007849	TRNT1	91	79.293	ENSPSIG00000017356	TRNT1	99	81.111	Pelodiscus_sinensis
ENSCPOG00000007849	TRNT1	98	66.118	ENSPMGG00000008888	trnt1	98	66.118	Periophthalmus_magnuspinnatus
ENSCPOG00000007849	TRNT1	99	90.993	ENSPEMG00000019845	Trnt1	99	90.993	Peromyscus_maniculatus_bairdii
ENSCPOG00000007849	TRNT1	100	83.582	ENSPCIG00000030436	TRNT1	99	84.296	Phascolarctos_cinereus
ENSCPOG00000007849	TRNT1	94	67.734	ENSPFOG00000006194	trnt1	95	67.734	Poecilia_formosa
ENSCPOG00000007849	TRNT1	94	67.734	ENSPLAG00000015623	trnt1	99	67.494	Poecilia_latipinna
ENSCPOG00000007849	TRNT1	96	65.957	ENSPMEG00000012216	trnt1	99	67.494	Poecilia_mexicana
ENSCPOG00000007849	TRNT1	96	65.957	ENSPREG00000021470	trnt1	99	65.957	Poecilia_reticulata
ENSCPOG00000007849	TRNT1	99	92.379	ENSPPYG00000013702	TRNT1	99	92.379	Pongo_abelii
ENSCPOG00000007849	TRNT1	88	89.295	ENSPCAG00000001951	TRNT1	100	89.295	Procavia_capensis
ENSCPOG00000007849	TRNT1	100	91.791	ENSPCOG00000022228	TRNT1	99	92.610	Propithecus_coquereli
ENSCPOG00000007849	TRNT1	88	89.034	ENSPVAG00000008784	TRNT1	99	89.034	Pteropus_vampyrus
ENSCPOG00000007849	TRNT1	98	67.294	ENSPNYG00000003120	trnt1	99	67.294	Pundamilia_nyererei
ENSCPOG00000007849	TRNT1	98	66.200	ENSPNAG00000000565	trnt1	99	66.200	Pygocentrus_nattereri
ENSCPOG00000007849	TRNT1	99	91.608	ENSRNOG00000006432	Trnt1	99	91.608	Rattus_norvegicus
ENSCPOG00000007849	TRNT1	100	89.552	ENSRBIG00000042632	TRNT1	99	89.838	Rhinopithecus_bieti
ENSCPOG00000007849	TRNT1	99	91.686	ENSRROG00000036866	TRNT1	99	91.686	Rhinopithecus_roxellana
ENSCPOG00000007849	TRNT1	99	92.148	ENSSBOG00000021208	TRNT1	99	92.148	Saimiri_boliviensis_boliviensis
ENSCPOG00000007849	TRNT1	99	83.834	ENSSHAG00000018861	TRNT1	99	83.834	Sarcophilus_harrisii
ENSCPOG00000007849	TRNT1	98	67.523	ENSSFOG00015020844	trnt1	99	67.523	Scleropages_formosus
ENSCPOG00000007849	TRNT1	98	66.118	ENSSMAG00000015432	trnt1	97	66.118	Scophthalmus_maximus
ENSCPOG00000007849	TRNT1	98	65.412	ENSSDUG00000012320	trnt1	99	65.412	Seriola_dumerili
ENSCPOG00000007849	TRNT1	56	63.485	ENSSLDG00000016463	-	96	61.265	Seriola_lalandi_dorsalis
ENSCPOG00000007849	TRNT1	98	65.412	ENSSLDG00000009325	trnt1	99	65.412	Seriola_lalandi_dorsalis
ENSCPOG00000007849	TRNT1	88	79.896	ENSSPUG00000014153	TRNT1	99	79.896	Sphenodon_punctatus
ENSCPOG00000007849	TRNT1	98	65.412	ENSSPAG00000021005	trnt1	99	65.412	Stegastes_partitus
ENSCPOG00000007849	TRNT1	99	90.762	ENSSSCG00000011529	TRNT1	99	90.762	Sus_scrofa
ENSCPOG00000007849	TRNT1	93	74.074	ENSTGUG00000010192	TRNT1	99	74.074	Taeniopygia_guttata
ENSCPOG00000007849	TRNT1	98	66.118	ENSTRUG00000001088	trnt1	99	66.118	Takifugu_rubripes
ENSCPOG00000007849	TRNT1	98	66.588	ENSTNIG00000007363	trnt1	98	66.588	Tetraodon_nigroviridis
ENSCPOG00000007849	TRNT1	100	87.313	ENSTBEG00000006367	TRNT1	100	75.655	Tupaia_belangeri
ENSCPOG00000007849	TRNT1	99	90.300	ENSTTRG00000007803	TRNT1	99	90.300	Tursiops_truncatus
ENSCPOG00000007849	TRNT1	99	90.300	ENSUAMG00000022574	TRNT1	99	90.300	Ursus_americanus
ENSCPOG00000007849	TRNT1	99	90.762	ENSUMAG00000024092	TRNT1	99	90.762	Ursus_maritimus
ENSCPOG00000007849	TRNT1	99	90.300	ENSVVUG00000012810	TRNT1	99	90.300	Vulpes_vulpes
ENSCPOG00000007849	TRNT1	98	63.869	ENSXETG00000025091	trnt1	99	65.920	Xenopus_tropicalis
ENSCPOG00000007849	TRNT1	96	65.957	ENSXCOG00000010150	trnt1	99	65.957	Xiphophorus_couchianus
ENSCPOG00000007849	TRNT1	96	65.485	ENSXMAG00000002227	trnt1	99	65.485	Xiphophorus_maculatus