EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000007910 (Gene tree)
Gene ID: 100732934
Gene Symbol: SNRNP48
Alias: C6orf151|FLJ32234|dJ336K20B.1|dJ512B11.2
Full Name: small nuclear ribonucleoprotein U11/U12 subunit 48
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 14953 bases
Position: chrDS562893.1:4130094-4145046
Accession: 100732934
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007121	zf-U11-48K	PF05253.12	8.4e-10	1	1
ENSCPOP00000018587	zf-U11-48K	PF05253.12	1e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000007985	SNRNP48-202	849	-	ENSCPOP00000007121	282 (aa)	-	H0VB55
ENSCPOT00000027710	SNRNP48-201	1572	XM_003468859	ENSCPOP00000018587	339 (aa)	XP_003468907	H0W6I3

Gene Model

Click here to download ENSCPOG00000007910's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000007910's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000007910	SNRNP48	100	90.855	ENSG00000168566	SNRNP48	100	90.855	Homo_sapiens
ENSCPOG00000007910	SNRNP48	81	48.057	ENSAPOG00000021430	snrnp48	96	43.059	Acanthochromis_polyacanthus
ENSCPOG00000007910	SNRNP48	99	85.303	ENSAMEG00000017349	SNRNP48	100	84.438	Ailuropoda_melanoleuca
ENSCPOG00000007910	SNRNP48	88	46.026	ENSACIG00000002032	snrnp48	96	42.363	Amphilophus_citrinellus
ENSCPOG00000007910	SNRNP48	81	47.350	ENSAOCG00000010562	snrnp48	96	43.429	Amphiprion_ocellaris
ENSCPOG00000007910	SNRNP48	81	47.331	ENSAPEG00000003231	snrnp48	96	43.391	Amphiprion_percula
ENSCPOG00000007910	SNRNP48	77	50.368	ENSATEG00000020210	snrnp48	81	50.000	Anabas_testudineus
ENSCPOG00000007910	SNRNP48	85	62.416	ENSACAG00000002811	SNRNP48	89	63.448	Anolis_carolinensis
ENSCPOG00000007910	SNRNP48	100	90.265	ENSANAG00000033538	SNRNP48	100	90.265	Aotus_nancymaae
ENSCPOG00000007910	SNRNP48	94	44.860	ENSAMXG00000015309	snrnp48	97	44.083	Astyanax_mexicanus
ENSCPOG00000007910	SNRNP48	100	84.412	ENSBTAG00000001123	SNRNP48	100	84.706	Bos_taurus
ENSCPOG00000007910	SNRNP48	100	90.265	ENSCJAG00000021330	SNRNP48	100	90.265	Callithrix_jacchus
ENSCPOG00000007910	SNRNP48	99	87.500	ENSCAFG00000009574	SNRNP48	83	87.500	Canis_familiaris
ENSCPOG00000007910	SNRNP48	99	87.500	ENSCAFG00020013203	SNRNP48	99	87.500	Canis_lupus_dingo
ENSCPOG00000007910	SNRNP48	100	86.471	ENSCHIG00000015216	SNRNP48	100	86.765	Capra_hircus
ENSCPOG00000007910	SNRNP48	100	89.676	ENSTSYG00000000698	SNRNP48	100	89.676	Carlito_syrichta
ENSCPOG00000007910	SNRNP48	91	94.481	ENSCAPG00000006768	SNRNP48	100	93.485	Cavia_aperea
ENSCPOG00000007910	SNRNP48	100	88.791	ENSCCAG00000035652	SNRNP48	100	88.791	Cebus_capucinus
ENSCPOG00000007910	SNRNP48	100	90.560	ENSCATG00000033947	SNRNP48	100	90.560	Cercocebus_atys
ENSCPOG00000007910	SNRNP48	100	94.100	ENSCLAG00000003765	SNRNP48	100	94.100	Chinchilla_lanigera
ENSCPOG00000007910	SNRNP48	100	90.855	ENSCSAG00000007409	SNRNP48	100	90.855	Chlorocebus_sabaeus
ENSCPOG00000007910	SNRNP48	85	63.245	ENSCPBG00000019146	SNRNP48	90	64.068	Chrysemys_picta_bellii
ENSCPOG00000007910	SNRNP48	94	30.982	ENSCING00000004121	-	87	30.272	Ciona_intestinalis
ENSCPOG00000007910	SNRNP48	100	90.855	ENSCANG00000030017	SNRNP48	100	90.855	Colobus_angolensis_palliatus
ENSCPOG00000007910	SNRNP48	100	85.546	ENSCGRG00001001076	-	100	85.546	Cricetulus_griseus_chok1gshd
ENSCPOG00000007910	SNRNP48	99	68.955	ENSCGRG00001008805	-	95	67.761	Cricetulus_griseus_chok1gshd
ENSCPOG00000007910	SNRNP48	100	85.546	ENSCGRG00000007781	Snrnp48	100	85.546	Cricetulus_griseus_crigri
ENSCPOG00000007910	SNRNP48	78	47.940	ENSCSEG00000000722	snrnp48	78	46.831	Cynoglossus_semilaevis
ENSCPOG00000007910	SNRNP48	95	46.667	ENSCVAG00000019829	snrnp48	82	44.248	Cyprinodon_variegatus
ENSCPOG00000007910	SNRNP48	81	46.831	ENSDARG00000039989	snrnp48	96	43.109	Danio_rerio
ENSCPOG00000007910	SNRNP48	100	86.471	ENSDNOG00000014978	SNRNP48	100	86.471	Dasypus_novemcinctus
ENSCPOG00000007910	SNRNP48	99	87.611	ENSDORG00000015140	Snrnp48	99	87.316	Dipodomys_ordii
ENSCPOG00000007910	SNRNP48	52	36.667	ENSEBUG00000016376	-	67	36.257	Eptatretus_burgeri
ENSCPOG00000007910	SNRNP48	99	88.757	ENSEASG00005012021	SNRNP48	99	88.757	Equus_asinus_asinus
ENSCPOG00000007910	SNRNP48	100	89.381	ENSECAG00000026937	SNRNP48	100	89.381	Equus_caballus
ENSCPOG00000007910	SNRNP48	100	65.882	ENSEEUG00000015437	SNRNP48	99	65.882	Erinaceus_europaeus
ENSCPOG00000007910	SNRNP48	90	47.619	ENSELUG00000009766	snrnp48	92	45.349	Esox_lucius
ENSCPOG00000007910	SNRNP48	100	88.496	ENSFCAG00000018853	SNRNP48	100	88.496	Felis_catus
ENSCPOG00000007910	SNRNP48	83	67.123	ENSFALG00000007797	SNRNP48	92	67.128	Ficedula_albicollis
ENSCPOG00000007910	SNRNP48	99	93.195	ENSFDAG00000009231	SNRNP48	100	92.920	Fukomys_damarensis
ENSCPOG00000007910	SNRNP48	59	55.446	ENSFHEG00000014647	snrnp48	97	46.667	Fundulus_heteroclitus
ENSCPOG00000007910	SNRNP48	73	46.774	ENSGMOG00000018599	-	98	42.415	Gadus_morhua
ENSCPOG00000007910	SNRNP48	77	69.742	ENSGALG00000013005	SNRNP48	90	70.037	Gallus_gallus
ENSCPOG00000007910	SNRNP48	82	47.183	ENSGAFG00000021639	snrnp48	93	44.315	Gambusia_affinis
ENSCPOG00000007910	SNRNP48	71	50.000	ENSGACG00000017756	-	96	43.353	Gasterosteus_aculeatus
ENSCPOG00000007910	SNRNP48	83	62.752	ENSGAGG00000000865	SNRNP48	96	63.051	Gopherus_agassizii
ENSCPOG00000007910	SNRNP48	100	90.855	ENSGGOG00000013220	SNRNP48	100	90.855	Gorilla_gorilla
ENSCPOG00000007910	SNRNP48	76	48.276	ENSHBUG00000017066	snrnp48	96	41.457	Haplochromis_burtoni
ENSCPOG00000007910	SNRNP48	99	94.379	ENSHGLG00000015241	SNRNP48	100	94.100	Heterocephalus_glaber_female
ENSCPOG00000007910	SNRNP48	99	94.379	ENSHGLG00100010027	SNRNP48	100	94.100	Heterocephalus_glaber_male
ENSCPOG00000007910	SNRNP48	72	47.561	ENSHCOG00000014066	snrnp48	92	42.687	Hippocampus_comes
ENSCPOG00000007910	SNRNP48	100	91.740	ENSSTOG00000014635	SNRNP48	100	91.740	Ictidomys_tridecemlineatus
ENSCPOG00000007910	SNRNP48	100	82.301	ENSJJAG00000011495	Snrnp48	100	82.301	Jaculus_jaculus
ENSCPOG00000007910	SNRNP48	90	44.625	ENSKMAG00000016514	snrnp48	94	42.353	Kryptolebias_marmoratus
ENSCPOG00000007910	SNRNP48	81	49.104	ENSLBEG00000026249	snrnp48	97	45.143	Labrus_bergylta
ENSCPOG00000007910	SNRNP48	96	53.293	ENSLACG00000003958	SNRNP48	98	52.339	Latimeria_chalumnae
ENSCPOG00000007910	SNRNP48	83	51.557	ENSLOCG00000004187	snrnp48	95	48.961	Lepisosteus_oculatus
ENSCPOG00000007910	SNRNP48	100	84.956	ENSLAFG00000011152	SNRNP48	100	84.956	Loxodonta_africana
ENSCPOG00000007910	SNRNP48	100	91.150	ENSMFAG00000045216	SNRNP48	100	91.150	Macaca_fascicularis
ENSCPOG00000007910	SNRNP48	100	91.150	ENSMMUG00000014785	SNRNP48	100	91.150	Macaca_mulatta
ENSCPOG00000007910	SNRNP48	100	90.855	ENSMNEG00000042269	SNRNP48	100	90.855	Macaca_nemestrina
ENSCPOG00000007910	SNRNP48	100	91.150	ENSMLEG00000034004	SNRNP48	100	91.150	Mandrillus_leucophaeus
ENSCPOG00000007910	SNRNP48	96	40.785	ENSMAMG00000018673	snrnp48	82	42.522	Mastacembelus_armatus
ENSCPOG00000007910	SNRNP48	83	66.438	ENSMGAG00000006037	SNRNP48	99	66.096	Meleagris_gallopavo
ENSCPOG00000007910	SNRNP48	100	86.431	ENSMAUG00000011944	Snrnp48	100	86.431	Mesocricetus_auratus
ENSCPOG00000007910	SNRNP48	100	87.316	ENSMICG00000012497	SNRNP48	100	87.316	Microcebus_murinus
ENSCPOG00000007910	SNRNP48	100	86.136	ENSMOCG00000015555	Snrnp48	100	86.136	Microtus_ochrogaster
ENSCPOG00000007910	SNRNP48	54	52.432	ENSMMOG00000003072	-	58	52.432	Mola_mola
ENSCPOG00000007910	SNRNP48	98	69.767	ENSMODG00000009996	SNRNP48	93	69.186	Monodelphis_domestica
ENSCPOG00000007910	SNRNP48	96	44.817	ENSMALG00000005725	snrnp48	95	42.647	Monopterus_albus
ENSCPOG00000007910	SNRNP48	100	86.136	MGP_CAROLIEiJ_G0018441	Snrnp48	100	86.136	Mus_caroli
ENSCPOG00000007910	SNRNP48	100	85.251	ENSMUSG00000021431	Snrnp48	100	85.251	Mus_musculus
ENSCPOG00000007910	SNRNP48	100	85.546	MGP_PahariEiJ_G0019509	Snrnp48	100	85.546	Mus_pahari
ENSCPOG00000007910	SNRNP48	100	85.251	MGP_SPRETEiJ_G0019321	Snrnp48	100	85.251	Mus_spretus
ENSCPOG00000007910	SNRNP48	99	85.503	ENSNGAG00000004849	Snrnp48	99	85.503	Nannospalax_galili
ENSCPOG00000007910	SNRNP48	76	47.893	ENSNBRG00000012127	snrnp48	96	41.457	Neolamprologus_brichardi
ENSCPOG00000007910	SNRNP48	100	91.150	ENSNLEG00000011667	SNRNP48	100	91.150	Nomascus_leucogenys
ENSCPOG00000007910	SNRNP48	95	77.709	ENSOPRG00000015471	SNRNP48	100	77.090	Ochotona_princeps
ENSCPOG00000007910	SNRNP48	92	34.161	ENSONIG00000001520	snrnp48	96	43.143	Oreochromis_niloticus
ENSCPOG00000007910	SNRNP48	60	59.239	ENSOANG00000019888	-	100	62.981	Ornithorhynchus_anatinus
ENSCPOG00000007910	SNRNP48	84	88.112	ENSOCUG00000005168	SNRNP48	100	87.500	Oryctolagus_cuniculus
ENSCPOG00000007910	SNRNP48	88	47.078	ENSORLG00000015654	snrnp48	94	44.509	Oryzias_latipes
ENSCPOG00000007910	SNRNP48	97	42.773	ENSORLG00020015976	snrnp48	82	42.817	Oryzias_latipes_hni
ENSCPOG00000007910	SNRNP48	88	46.753	ENSORLG00015022379	snrnp48	81	44.798	Oryzias_latipes_hsok
ENSCPOG00000007910	SNRNP48	83	46.528	ENSOMEG00000022007	snrnp48	95	42.693	Oryzias_melastigma
ENSCPOG00000007910	SNRNP48	91	86.452	ENSOGAG00000005275	SNRNP48	96	86.435	Otolemur_garnettii
ENSCPOG00000007910	SNRNP48	84	86.713	ENSOARG00000017319	SNRNP48	99	86.926	Ovis_aries
ENSCPOG00000007910	SNRNP48	100	91.150	ENSPPAG00000032873	SNRNP48	100	91.150	Pan_paniscus
ENSCPOG00000007910	SNRNP48	100	88.791	ENSPPRG00000004283	SNRNP48	100	88.791	Panthera_pardus
ENSCPOG00000007910	SNRNP48	84	89.510	ENSPTIG00000013502	SNRNP48	99	89.753	Panthera_tigris_altaica
ENSCPOG00000007910	SNRNP48	100	91.150	ENSPTRG00000017703	SNRNP48	100	91.150	Pan_troglodytes
ENSCPOG00000007910	SNRNP48	100	91.150	ENSPANG00000000771	SNRNP48	100	91.150	Papio_anubis
ENSCPOG00000007910	SNRNP48	95	46.154	ENSPKIG00000013703	snrnp48	70	45.994	Paramormyrops_kingsleyae
ENSCPOG00000007910	SNRNP48	84	62.542	ENSPSIG00000002213	SNRNP48	92	62.457	Pelodiscus_sinensis
ENSCPOG00000007910	SNRNP48	72	48.178	ENSPMGG00000008120	snrnp48	86	47.755	Periophthalmus_magnuspinnatus
ENSCPOG00000007910	SNRNP48	100	85.841	ENSPEMG00000008872	Snrnp48	100	85.841	Peromyscus_maniculatus_bairdii
ENSCPOG00000007910	SNRNP48	82	48.387	ENSPFOG00000003578	snrnp48	93	45.266	Poecilia_formosa
ENSCPOG00000007910	SNRNP48	67	51.528	ENSPLAG00000002290	snrnp48	77	51.528	Poecilia_latipinna
ENSCPOG00000007910	SNRNP48	82	47.670	ENSPMEG00000018033	snrnp48	93	44.675	Poecilia_mexicana
ENSCPOG00000007910	SNRNP48	72	51.626	ENSPREG00000018541	snrnp48	93	44.477	Poecilia_reticulata
ENSCPOG00000007910	SNRNP48	100	89.676	ENSPPYG00000016209	SNRNP48	100	89.676	Pongo_abelii
ENSCPOG00000007910	SNRNP48	79	70.037	ENSPCAG00000011991	SNRNP48	99	70.037	Procavia_capensis
ENSCPOG00000007910	SNRNP48	100	87.611	ENSPVAG00000002854	SNRNP48	100	87.611	Pteropus_vampyrus
ENSCPOG00000007910	SNRNP48	76	48.659	ENSPNYG00000015399	snrnp48	99	42.985	Pundamilia_nyererei
ENSCPOG00000007910	SNRNP48	100	86.431	ENSRNOG00000013756	Snrnp48	100	86.431	Rattus_norvegicus
ENSCPOG00000007910	SNRNP48	93	91.083	ENSRBIG00000043856	SNRNP48	97	92.508	Rhinopithecus_bieti
ENSCPOG00000007910	SNRNP48	100	90.855	ENSRROG00000043229	SNRNP48	100	90.855	Rhinopithecus_roxellana
ENSCPOG00000007910	SNRNP48	100	90.265	ENSSBOG00000019486	SNRNP48	100	90.265	Saimiri_boliviensis_boliviensis
ENSCPOG00000007910	SNRNP48	98	70.640	ENSSHAG00000014483	SNRNP48	99	70.640	Sarcophilus_harrisii
ENSCPOG00000007910	SNRNP48	73	50.988	ENSSFOG00015006610	snrnp48	73	46.130	Scleropages_formosus
ENSCPOG00000007910	SNRNP48	88	47.176	ENSSDUG00000014953	snrnp48	96	44.186	Seriola_dumerili
ENSCPOG00000007910	SNRNP48	88	46.205	ENSSLDG00000005989	snrnp48	96	43.553	Seriola_lalandi_dorsalis
ENSCPOG00000007910	SNRNP48	98	59.130	ENSSPUG00000006257	SNRNP48	84	64.846	Sphenodon_punctatus
ENSCPOG00000007910	SNRNP48	78	48.175	ENSSPAG00000006454	snrnp48	93	45.289	Stegastes_partitus
ENSCPOG00000007910	SNRNP48	83	65.292	ENSTGUG00000007575	SNRNP48	92	65.278	Taeniopygia_guttata
ENSCPOG00000007910	SNRNP48	73	49.402	ENSTRUG00000007031	snrnp48	94	45.029	Takifugu_rubripes
ENSCPOG00000007910	SNRNP48	93	42.138	ENSTNIG00000012977	-	94	40.643	Tetraodon_nigroviridis
ENSCPOG00000007910	SNRNP48	100	73.746	ENSTBEG00000015620	SNRNP48	100	73.746	Tupaia_belangeri
ENSCPOG00000007910	SNRNP48	100	86.431	ENSTTRG00000016715	SNRNP48	100	86.431	Tursiops_truncatus
ENSCPOG00000007910	SNRNP48	100	88.791	ENSUAMG00000003690	SNRNP48	100	87.906	Ursus_americanus
ENSCPOG00000007910	SNRNP48	84	85.664	ENSVPAG00000003557	SNRNP48	99	85.512	Vicugna_pacos
ENSCPOG00000007910	SNRNP48	99	87.500	ENSVVUG00000004996	SNRNP48	99	87.500	Vulpes_vulpes
ENSCPOG00000007910	SNRNP48	88	53.115	ENSXETG00000020447	snrnp48	97	52.071	Xenopus_tropicalis
ENSCPOG00000007910	SNRNP48	67	50.870	ENSXCOG00000004478	snrnp48	69	50.870	Xiphophorus_couchianus
ENSCPOG00000007910	SNRNP48	82	49.104	ENSXMAG00000013595	snrnp48	93	45.858	Xiphophorus_maculatus