EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000007957 (Gene tree)
Gene ID: 100735713
Gene Symbol: PLEC
Alias: EBS1|PCN|PLEC1|PLTN
Full Name: plectin
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 34314 bases
Position: chrDS562950.1:3028596-3062909
Accession: 100735713
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007161	S10_plectin	PF03501.15	9.4e-36	1	1
ENSCPOP00000022955	S10_plectin	PF03501.15	9.4e-36	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000008032	PLEC-202	14055	-	ENSCPOP00000007161	4684 (aa)	-	H0VB93
ENSCPOT00000047867	PLEC-201	14070	XM_013145738	ENSCPOP00000022955	4689 (aa)	XP_013001192	A0A286XBZ1
ENSCPOT00000037571	PLEC-203	13434	-	ENSCPOP00000023470	4477 (aa)	-	A0A286XDE3

Gene Model

Click here to download ENSCPOG00000007957's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000007957's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000007957	PLEC	100	93.389	ENSG00000178209	PLEC	100	100.000	Homo_sapiens
ENSCPOG00000007957	PLEC	100	89.981	ENSAMEG00000006191	PLEC	100	90.066	Ailuropoda_melanoleuca
ENSCPOG00000007957	PLEC	100	92.897	ENSANAG00000032431	PLEC	100	92.875	Aotus_nancymaae
ENSCPOG00000007957	PLEC	100	92.019	ENSBTAG00000011922	PLEC	100	92.019	Bos_taurus
ENSCPOG00000007957	PLEC	100	93.153	ENSCJAG00000021472	PLEC	100	93.131	Callithrix_jacchus
ENSCPOG00000007957	PLEC	100	92.198	ENSCAFG00000001433	PLEC	100	92.198	Canis_familiaris
ENSCPOG00000007957	PLEC	88	92.011	ENSCHIG00000022260	PLEC	99	92.011	Capra_hircus
ENSCPOG00000007957	PLEC	100	94.050	ENSTSYG00000033419	PLEC	100	94.050	Carlito_syrichta
ENSCPOG00000007957	PLEC	100	93.259	ENSCCAG00000031237	PLEC	100	93.238	Cebus_capucinus
ENSCPOG00000007957	PLEC	100	93.709	ENSCATG00000009349	PLEC	100	93.709	Cercocebus_atys
ENSCPOG00000007957	PLEC	100	97.293	ENSCLAG00000012830	PLEC	100	97.293	Chinchilla_lanigera
ENSCPOG00000007957	PLEC	100	74.916	ENSCPBG00000021974	PLEC	99	73.709	Chrysemys_picta_bellii
ENSCPOG00000007957	PLEC	100	94.821	ENSCGRG00001019864	Plec	100	94.821	Cricetulus_griseus_chok1gshd
ENSCPOG00000007957	PLEC	100	94.093	ENSCGRG00000002714	Plec	100	94.093	Cricetulus_griseus_crigri
ENSCPOG00000007957	PLEC	96	89.593	ENSDNOG00000031742	PLEC	99	89.593	Dasypus_novemcinctus
ENSCPOG00000007957	PLEC	79	92.793	ENSETEG00000015535	-	62	92.793	Echinops_telfairi
ENSCPOG00000007957	PLEC	85	96.177	ENSEEUG00000004554	-	67	96.483	Erinaceus_europaeus
ENSCPOG00000007957	PLEC	100	92.104	ENSFCAG00000042897	PLEC	100	92.104	Felis_catus
ENSCPOG00000007957	PLEC	100	96.674	ENSFDAG00000011856	PLEC	100	96.674	Fukomys_damarensis
ENSCPOG00000007957	PLEC	100	88.667	ENSGGOG00000012217	PLEC	100	91.088	Gorilla_gorilla
ENSCPOG00000007957	PLEC	100	96.671	ENSHGLG00000012646	PLEC	100	96.671	Heterocephalus_glaber_female
ENSCPOG00000007957	PLEC	100	84.769	ENSHGLG00100011759	PLEC	100	85.092	Heterocephalus_glaber_male
ENSCPOG00000007957	PLEC	100	93.552	ENSSTOG00000023061	PLEC	100	93.531	Ictidomys_tridecemlineatus
ENSCPOG00000007957	PLEC	100	94.178	ENSJJAG00000012390	Plec	100	94.178	Jaculus_jaculus
ENSCPOG00000007957	PLEC	100	93.602	ENSMFAG00000032066	PLEC	100	93.602	Macaca_fascicularis
ENSCPOG00000007957	PLEC	100	89.974	ENSMMUG00000000388	PLEC	100	90.379	Macaca_mulatta
ENSCPOG00000007957	PLEC	100	93.609	ENSMNEG00000011406	PLEC	100	93.602	Macaca_nemestrina
ENSCPOG00000007957	PLEC	97	90.221	ENSMLEG00000033296	PLEC	100	93.527	Mandrillus_leucophaeus
ENSCPOG00000007957	PLEC	100	94.608	ENSMAUG00000001116	Plec	100	94.608	Mesocricetus_auratus
ENSCPOG00000007957	PLEC	100	93.797	ENSMICG00000016160	PLEC	100	93.797	Microcebus_murinus
ENSCPOG00000007957	PLEC	100	94.864	ENSMOCG00000000674	Plec	100	94.864	Microtus_ochrogaster
ENSCPOG00000007957	PLEC	100	94.672	MGP_CAROLIEiJ_G0019913	Plec	100	94.917	Mus_caroli
ENSCPOG00000007957	PLEC	100	94.650	ENSMUSG00000022565	Plec	100	95.021	Mus_musculus
ENSCPOG00000007957	PLEC	100	94.650	MGP_PahariEiJ_G0019923	Plec	100	95.124	Mus_pahari
ENSCPOG00000007957	PLEC	100	94.650	MGP_SPRETEiJ_G0020816	Plec	100	94.917	Mus_spretus
ENSCPOG00000007957	PLEC	100	90.269	ENSMPUG00000007329	PLEC	100	90.354	Mustela_putorius_furo
ENSCPOG00000007957	PLEC	100	94.864	ENSNGAG00000008931	Plec	100	94.864	Nannospalax_galili
ENSCPOG00000007957	PLEC	98	91.872	ENSMEUG00000004499	-	70	93.179	Notamacropus_eugenii
ENSCPOG00000007957	PLEC	91	91.629	ENSOPRG00000015206	PLEC	67	91.629	Ochotona_princeps
ENSCPOG00000007957	PLEC	93	79.067	ENSOARG00000015846	-	100	79.663	Ovis_aries
ENSCPOG00000007957	PLEC	100	84.710	ENSPPAG00000042112	PLEC	100	87.231	Pan_paniscus
ENSCPOG00000007957	PLEC	100	93.474	ENSPTRG00000020672	PLEC	100	93.474	Pan_troglodytes
ENSCPOG00000007957	PLEC	100	93.453	ENSPANG00000023403	-	100	93.453	Papio_anubis
ENSCPOG00000007957	PLEC	100	94.763	ENSPEMG00000011922	Plec	100	94.826	Peromyscus_maniculatus_bairdii
ENSCPOG00000007957	PLEC	100	83.150	ENSPCIG00000014981	PLEC	100	83.210	Phascolarctos_cinereus
ENSCPOG00000007957	PLEC	100	93.730	ENSPCOG00000023279	PLEC	100	93.730	Propithecus_coquereli
ENSCPOG00000007957	PLEC	100	91.655	ENSPVAG00000009376	PLEC	91	91.678	Pteropus_vampyrus
ENSCPOG00000007957	PLEC	100	94.710	ENSRNOG00000023781	Plec	100	94.710	Rattus_norvegicus
ENSCPOG00000007957	PLEC	100	84.831	ENSRBIG00000041068	PLEC	61	84.148	Rhinopithecus_bieti
ENSCPOG00000007957	PLEC	100	93.520	ENSRROG00000015881	PLEC	100	93.520	Rhinopithecus_roxellana
ENSCPOG00000007957	PLEC	100	90.977	ENSSBOG00000025259	PLEC	100	90.977	Saimiri_boliviensis_boliviensis
ENSCPOG00000007957	PLEC	99	77.989	ENSSHAG00000009020	PLEC	99	79.484	Sarcophilus_harrisii
ENSCPOG00000007957	PLEC	97	89.614	ENSTTRG00000010427	PLEC	95	89.884	Tursiops_truncatus
ENSCPOG00000007957	PLEC	100	91.686	ENSVVUG00000010214	PLEC	100	91.686	Vulpes_vulpes