EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000008302 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 962 bases
Position: chrDS562994.1:1175600-1176561
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017268	dsrm	PF00035.26	1.4e-20	1	2
ENSCPOP00000017268	dsrm	PF00035.26	1.4e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000008377	-	903	-	ENSCPOP00000017268	300 (aa)	-	H0W2S3

Gene Model

Click here to download ENSCPOG00000008302's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008302's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000008302	-	96	40.171	ENSCPOG00000001009	TARBP2	95	39.316
ENSCPOG00000008302	-	100	87.736	ENSCPOG00000003900	-	100	86.164

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008302	-	96	92.881	ENSG00000180228	PRKRA	100	91.468	Homo_sapiens
ENSCPOG00000008302	-	94	48.797	ENSAPOG00000019819	prkra	93	50.515	Acanthochromis_polyacanthus
ENSCPOG00000008302	-	100	87.421	ENSAMEG00000000803	PRKRA	100	85.849	Ailuropoda_melanoleuca
ENSCPOG00000008302	-	96	46.233	ENSACIG00000020131	prkra	98	48.084	Amphilophus_citrinellus
ENSCPOG00000008302	-	94	46.897	ENSAOCG00000008651	prkra	99	48.621	Amphiprion_ocellaris
ENSCPOG00000008302	-	94	48.973	ENSAPEG00000022769	prkra	97	48.621	Amphiprion_percula
ENSCPOG00000008302	-	96	47.619	ENSATEG00000015036	prkra	93	49.320	Anabas_testudineus
ENSCPOG00000008302	-	98	58.900	ENSACAG00000017232	PRKRA	86	58.576	Anolis_carolinensis
ENSCPOG00000008302	-	100	87.421	ENSANAG00000019410	PRKRA	100	85.849	Aotus_nancymaae
ENSCPOG00000008302	-	91	50.534	ENSACLG00000008370	prkra	91	49.822	Astatotilapia_calliptera
ENSCPOG00000008302	-	92	50.000	ENSAMXG00000034602	prkra	91	49.828	Astyanax_mexicanus
ENSCPOG00000008302	-	96	92.203	ENSBTAG00000001096	PRKRA	96	90.508	Bos_taurus
ENSCPOG00000008302	-	100	87.736	ENSCJAG00000021521	PRKRA	100	86.164	Callithrix_jacchus
ENSCPOG00000008302	-	100	87.736	ENSCAFG00000013850	PRKRA	100	86.164	Canis_familiaris
ENSCPOG00000008302	-	100	86.478	ENSCHIG00000015333	PRKRA	100	84.906	Capra_hircus
ENSCPOG00000008302	-	100	87.736	ENSTSYG00000009707	PRKRA	100	86.164	Carlito_syrichta
ENSCPOG00000008302	-	77	73.109	ENSCAPG00000006602	PRKRA	100	73.109	Cavia_aperea
ENSCPOG00000008302	-	100	87.736	ENSCCAG00000024400	PRKRA	100	86.164	Cebus_capucinus
ENSCPOG00000008302	-	100	87.421	ENSCATG00000032736	PRKRA	100	85.849	Cercocebus_atys
ENSCPOG00000008302	-	96	85.763	ENSCATG00000037246	-	97	84.407	Cercocebus_atys
ENSCPOG00000008302	-	96	93.220	ENSCLAG00000010338	PRKRA	97	91.525	Chinchilla_lanigera
ENSCPOG00000008302	-	96	88.136	ENSCSAG00000018878	-	93	86.441	Chlorocebus_sabaeus
ENSCPOG00000008302	-	96	64.407	ENSCPBG00000021934	PRKRA	92	63.051	Chrysemys_picta_bellii
ENSCPOG00000008302	-	95	85.666	ENSCANG00000037988	-	100	83.959	Colobus_angolensis_palliatus
ENSCPOG00000008302	-	94	93.056	ENSCANG00000034610	PRKRA	100	91.319	Colobus_angolensis_palliatus
ENSCPOG00000008302	-	100	87.421	ENSCGRG00001009200	Prkra	79	85.849	Cricetulus_griseus_chok1gshd
ENSCPOG00000008302	-	100	87.421	ENSCGRG00000002863	Prkra	100	85.849	Cricetulus_griseus_crigri
ENSCPOG00000008302	-	93	48.780	ENSCSEG00000002954	prkra	85	48.592	Cynoglossus_semilaevis
ENSCPOG00000008302	-	93	45.791	ENSCVAG00000002749	prkra	91	47.887	Cyprinodon_variegatus
ENSCPOG00000008302	-	93	45.918	ENSDARG00000076718	prkra	97	45.205	Danio_rerio
ENSCPOG00000008302	-	96	92.881	ENSDNOG00000019701	PRKRA	93	91.186	Dasypus_novemcinctus
ENSCPOG00000008302	-	100	84.591	ENSDORG00000013338	Prkra	100	83.019	Dipodomys_ordii
ENSCPOG00000008302	-	62	77.073	ENSETEG00000010357	PRKRA	98	76.585	Echinops_telfairi
ENSCPOG00000008302	-	100	87.736	ENSEASG00005022436	PRKRA	100	86.164	Equus_asinus_asinus
ENSCPOG00000008302	-	96	93.220	ENSECAG00000024263	PRKRA	100	86.164	Equus_caballus
ENSCPOG00000008302	-	96	83.390	ENSEEUG00000000476	PRKRA	93	81.695	Erinaceus_europaeus
ENSCPOG00000008302	-	96	50.000	ENSELUG00000023321	prkra	92	49.351	Esox_lucius
ENSCPOG00000008302	-	100	87.736	ENSFCAG00000031042	PRKRA	100	86.164	Felis_catus
ENSCPOG00000008302	-	98	88.961	ENSFDAG00000012882	PRKRA	99	87.908	Fukomys_damarensis
ENSCPOG00000008302	-	92	46.377	ENSGMOG00000004021	prkra	94	45.652	Gadus_morhua
ENSCPOG00000008302	-	100	45.659	ENSGAFG00000004418	prkra	91	47.535	Gambusia_affinis
ENSCPOG00000008302	-	94	49.129	ENSGACG00000004394	prkra	92	49.129	Gasterosteus_aculeatus
ENSCPOG00000008302	-	99	61.905	ENSGAGG00000010791	PRKRA	99	60.635	Gopherus_agassizii
ENSCPOG00000008302	-	100	87.107	ENSGGOG00000005754	PRKRA	100	85.535	Gorilla_gorilla
ENSCPOG00000008302	-	91	50.534	ENSHBUG00000020169	prkra	91	49.822	Haplochromis_burtoni
ENSCPOG00000008302	-	96	91.186	ENSHGLG00000010663	PRKRA	93	89.492	Heterocephalus_glaber_female
ENSCPOG00000008302	-	96	79.661	ENSHGLG00000002194	-	92	78.983	Heterocephalus_glaber_female
ENSCPOG00000008302	-	96	91.186	ENSHGLG00100013982	-	99	89.492	Heterocephalus_glaber_male
ENSCPOG00000008302	-	96	79.661	ENSHGLG00100004391	-	92	78.983	Heterocephalus_glaber_male
ENSCPOG00000008302	-	94	46.875	ENSHCOG00000000168	prkra	91	47.222	Hippocampus_comes
ENSCPOG00000008302	-	93	50.000	ENSIPUG00000019396	prkra	95	49.301	Ictalurus_punctatus
ENSCPOG00000008302	-	96	92.542	ENSSTOG00000006156	PRKRA	93	90.847	Ictidomys_tridecemlineatus
ENSCPOG00000008302	-	100	86.478	ENSJJAG00000013031	Prkra	100	84.906	Jaculus_jaculus
ENSCPOG00000008302	-	93	50.000	ENSKMAG00000016206	prkra	91	48.958	Kryptolebias_marmoratus
ENSCPOG00000008302	-	94	50.000	ENSLBEG00000017208	prkra	91	50.000	Labrus_bergylta
ENSCPOG00000008302	-	96	60.339	ENSLACG00000002855	PRKRA	93	60.339	Latimeria_chalumnae
ENSCPOG00000008302	-	95	53.425	ENSLOCG00000006829	prkra	93	52.397	Lepisosteus_oculatus
ENSCPOG00000008302	-	79	90.535	ENSLAFG00000026940	PRKRA	98	89.712	Loxodonta_africana
ENSCPOG00000008302	-	100	87.421	ENSMFAG00000040213	PRKRA	100	85.849	Macaca_fascicularis
ENSCPOG00000008302	-	96	92.881	ENSMMUG00000002185	PRKRA	96	91.186	Macaca_mulatta
ENSCPOG00000008302	-	100	87.421	ENSMNEG00000031681	PRKRA	100	85.849	Macaca_nemestrina
ENSCPOG00000008302	-	96	79.322	ENSMNEG00000030245	-	96	78.644	Macaca_nemestrina
ENSCPOG00000008302	-	90	87.681	ENSMLEG00000031889	-	96	86.232	Mandrillus_leucophaeus
ENSCPOG00000008302	-	95	93.174	ENSMLEG00000019578	PRKRA	100	91.468	Mandrillus_leucophaeus
ENSCPOG00000008302	-	94	47.782	ENSMAMG00000006591	prkra	91	48.958	Mastacembelus_armatus
ENSCPOG00000008302	-	76	45.532	ENSMZEG00005004467	prkra	78	44.681	Maylandia_zebra
ENSCPOG00000008302	-	100	87.421	ENSMAUG00000019631	Prkra	100	85.849	Mesocricetus_auratus
ENSCPOG00000008302	-	100	87.421	ENSMICG00000009883	PRKRA	100	85.849	Microcebus_murinus
ENSCPOG00000008302	-	100	86.792	ENSMOCG00000004548	Prkra	100	85.220	Microtus_ochrogaster
ENSCPOG00000008302	-	97	44.595	ENSMMOG00000000434	prkra	97	45.548	Mola_mola
ENSCPOG00000008302	-	96	76.610	ENSMODG00000009823	PRKRA	93	74.915	Monodelphis_domestica
ENSCPOG00000008302	-	96	48.475	ENSMALG00000010225	prkra	87	50.169	Monopterus_albus
ENSCPOG00000008302	-	100	86.792	MGP_CAROLIEiJ_G0023688	Prkra	100	85.220	Mus_caroli
ENSCPOG00000008302	-	100	86.792	ENSMUSG00000002731	Prkra	100	85.220	Mus_musculus
ENSCPOG00000008302	-	100	86.792	MGP_PahariEiJ_G0025139	Prkra	100	85.220	Mus_pahari
ENSCPOG00000008302	-	100	86.478	MGP_SPRETEiJ_G0024609	Prkra	100	84.906	Mus_spretus
ENSCPOG00000008302	-	100	87.736	ENSMPUG00000003180	PRKRA	100	86.164	Mustela_putorius_furo
ENSCPOG00000008302	-	96	70.068	ENSMLUG00000024042	-	100	69.048	Myotis_lucifugus
ENSCPOG00000008302	-	96	91.864	ENSMLUG00000005810	-	93	90.169	Myotis_lucifugus
ENSCPOG00000008302	-	96	92.881	ENSNGAG00000021816	Prkra	93	91.186	Nannospalax_galili
ENSCPOG00000008302	-	91	51.246	ENSNBRG00000010819	prkra	91	50.534	Neolamprologus_brichardi
ENSCPOG00000008302	-	95	93.174	ENSNLEG00000006120	-	100	91.468	Nomascus_leucogenys
ENSCPOG00000008302	-	96	71.864	ENSMEUG00000002625	PRKRA	99	70.169	Notamacropus_eugenii
ENSCPOG00000008302	-	77	89.540	ENSOPRG00000007575	PRKRA	75	87.448	Ochotona_princeps
ENSCPOG00000008302	-	96	79.322	ENSODEG00000007930	-	97	79.322	Octodon_degus
ENSCPOG00000008302	-	100	87.107	ENSODEG00000008743	-	100	85.535	Octodon_degus
ENSCPOG00000008302	-	91	48.582	ENSONIG00000008579	prkra	96	50.709	Oreochromis_niloticus
ENSCPOG00000008302	-	96	60.204	ENSOANG00000008630	-	91	59.864	Ornithorhynchus_anatinus
ENSCPOG00000008302	-	100	86.478	ENSOCUG00000005489	PRKRA	100	84.906	Oryctolagus_cuniculus
ENSCPOG00000008302	-	96	47.987	ENSORLG00000017598	prkra	91	48.322	Oryzias_latipes
ENSCPOG00000008302	-	96	47.987	ENSORLG00020020348	prkra	91	48.322	Oryzias_latipes_hni
ENSCPOG00000008302	-	96	47.297	ENSORLG00015014417	prkra	91	48.322	Oryzias_latipes_hsok
ENSCPOG00000008302	-	96	49.324	ENSOMEG00000005162	prkra	93	50.167	Oryzias_melastigma
ENSCPOG00000008302	-	100	87.421	ENSOGAG00000013971	PRKRA	100	85.849	Otolemur_garnettii
ENSCPOG00000008302	-	100	86.792	ENSOARG00000017321	PRKRA	100	85.220	Ovis_aries
ENSCPOG00000008302	-	83	85.338	ENSPPAG00000043306	PRKRA	100	84.586	Pan_paniscus
ENSCPOG00000008302	-	100	87.736	ENSPPRG00000011982	-	100	86.164	Panthera_pardus
ENSCPOG00000008302	-	96	93.220	ENSPTIG00000010369	PRKRA	100	91.809	Panthera_tigris_altaica
ENSCPOG00000008302	-	100	87.421	ENSPTRG00000012688	PRKRA	100	85.849	Pan_troglodytes
ENSCPOG00000008302	-	90	87.319	ENSPANG00000035264	-	94	85.507	Papio_anubis
ENSCPOG00000008302	-	100	87.421	ENSPANG00000001046	PRKRA	100	85.849	Papio_anubis
ENSCPOG00000008302	-	95	50.340	ENSPKIG00000022368	prkra	91	51.203	Paramormyrops_kingsleyae
ENSCPOG00000008302	-	95	63.605	ENSPSIG00000002848	PRKRA	100	62.245	Pelodiscus_sinensis
ENSCPOG00000008302	-	100	86.164	ENSPEMG00000011967	Prkra	100	84.591	Peromyscus_maniculatus_bairdii
ENSCPOG00000008302	-	98	74.679	ENSPCIG00000025371	PRKRA	72	73.077	Phascolarctos_cinereus
ENSCPOG00000008302	-	93	46.831	ENSPFOG00000015000	prkra	90	46.897	Poecilia_formosa
ENSCPOG00000008302	-	93	46.479	ENSPLAG00000021726	prkra	91	46.552	Poecilia_latipinna
ENSCPOG00000008302	-	93	46.831	ENSPMEG00000006172	prkra	90	46.897	Poecilia_mexicana
ENSCPOG00000008302	-	93	45.775	ENSPREG00000005680	prkra	91	45.862	Poecilia_reticulata
ENSCPOG00000008302	-	100	87.107	ENSPPYG00000012976	PRKRA	100	85.535	Pongo_abelii
ENSCPOG00000008302	-	100	87.736	ENSPCOG00000018812	PRKRA	100	86.164	Propithecus_coquereli
ENSCPOG00000008302	-	100	77.987	ENSPVAG00000017505	PRKRA	100	77.987	Pteropus_vampyrus
ENSCPOG00000008302	-	91	50.890	ENSPNYG00000008795	prkra	91	51.246	Pundamilia_nyererei
ENSCPOG00000008302	-	96	48.311	ENSPNAG00000021962	prkra	93	47.297	Pygocentrus_nattereri
ENSCPOG00000008302	-	100	87.421	ENSRNOG00000011195	Prkra	100	85.849	Rattus_norvegicus
ENSCPOG00000008302	-	100	87.421	ENSRBIG00000035301	PRKRA	100	85.849	Rhinopithecus_bieti
ENSCPOG00000008302	-	96	88.475	ENSRBIG00000042015	-	97	86.780	Rhinopithecus_bieti
ENSCPOG00000008302	-	100	87.421	ENSRROG00000035389	PRKRA	100	85.849	Rhinopithecus_roxellana
ENSCPOG00000008302	-	100	87.736	ENSSBOG00000012105	PRKRA	100	86.164	Saimiri_boliviensis_boliviensis
ENSCPOG00000008302	-	96	76.271	ENSSHAG00000009949	PRKRA	99	74.576	Sarcophilus_harrisii
ENSCPOG00000008302	-	93	47.603	ENSSFOG00015002157	prkra	90	47.059	Scleropages_formosus
ENSCPOG00000008302	-	93	47.973	ENSSMAG00000015615	prkra	82	49.324	Scophthalmus_maximus
ENSCPOG00000008302	-	94	48.276	ENSSDUG00000000636	prkra	92	49.655	Seriola_dumerili
ENSCPOG00000008302	-	94	48.410	ENSSLDG00000000652	prkra	88	49.470	Seriola_lalandi_dorsalis
ENSCPOG00000008302	-	96	90.847	ENSSARG00000003080	PRKRA	92	89.153	Sorex_araneus
ENSCPOG00000008302	-	98	59.807	ENSSPUG00000006140	PRKRA	88	58.521	Sphenodon_punctatus
ENSCPOG00000008302	-	94	47.931	ENSSPAG00000021062	prkra	92	49.310	Stegastes_partitus
ENSCPOG00000008302	-	100	87.736	ENSSSCG00000038254	PRKRA	100	86.164	Sus_scrofa
ENSCPOG00000008302	-	93	46.897	ENSTRUG00000021336	prkra	91	47.241	Takifugu_rubripes
ENSCPOG00000008302	-	94	46.713	ENSTNIG00000016963	prkra	91	47.222	Tetraodon_nigroviridis
ENSCPOG00000008302	-	100	85.535	ENSTBEG00000006494	PRKRA	100	83.962	Tupaia_belangeri
ENSCPOG00000008302	-	83	85.338	ENSTTRG00000009700	PRKRA	100	84.586	Tursiops_truncatus
ENSCPOG00000008302	-	95	93.174	ENSUMAG00000016566	PRKRA	100	91.468	Ursus_maritimus
ENSCPOG00000008302	-	96	83.729	ENSVPAG00000003485	PRKRA	99	82.034	Vicugna_pacos
ENSCPOG00000008302	-	96	93.220	ENSVVUG00000010032	PRKRA	96	91.525	Vulpes_vulpes
ENSCPOG00000008302	-	100	44.695	ENSXMAG00000027764	prkra	100	45.016	Xiphophorus_maculatus