EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000008546 (Gene tree)
Gene ID: -
Gene Symbol: SALL3
Alias: ZNF796
Full Name: spalt like transcription factor 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 5041 bases
Position: chrDS562960.1:1953908-1958948
Accession: 100726621
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007681	zf-C2H2	PF00096.26	5.4e-25	1	5
ENSCPOP00000007681	zf-C2H2	PF00096.26	5.4e-25	2	5
ENSCPOP00000007681	zf-C2H2	PF00096.26	5.4e-25	3	5
ENSCPOP00000007681	zf-C2H2	PF00096.26	5.4e-25	4	5
ENSCPOP00000007681	zf-C2H2	PF00096.26	5.4e-25	5	5
ENSCPOP00000007681	zf-met	PF12874.7	7.4e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000008623	SALL3-201	3645	XM_003463310	ENSCPOP00000007681	1214 (aa)	XP_003463358	H0VCL2

Gene Model

Click here to download ENSCPOG00000008546's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008546's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000008546	SALL3	99	65.306	ENSCPOG00000006564	SALL1	99	65.306

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008546	SALL3	99	90.775	ENSG00000256463	SALL3	98	90.775	Homo_sapiens
ENSCPOG00000008546	SALL3	99	51.894	ENSAPOG00000004264	sall3b	72	56.823	Acanthochromis_polyacanthus
ENSCPOG00000008546	SALL3	72	69.869	ENSAPOG00000020922	sall3a	70	68.532	Acanthochromis_polyacanthus
ENSCPOG00000008546	SALL3	99	90.272	ENSAMEG00000010206	SALL3	99	90.272	Ailuropoda_melanoleuca
ENSCPOG00000008546	SALL3	78	59.156	ENSACIG00000019407	sall3b	98	59.622	Amphilophus_citrinellus
ENSCPOG00000008546	SALL3	82	70.627	ENSACIG00000014041	sall3a	98	70.187	Amphilophus_citrinellus
ENSCPOG00000008546	SALL3	99	51.680	ENSAOCG00000012779	sall3b	72	57.435	Amphiprion_ocellaris
ENSCPOG00000008546	SALL3	78	69.727	ENSAOCG00000010863	sall3a	96	69.273	Amphiprion_ocellaris
ENSCPOG00000008546	SALL3	78	57.096	ENSAPEG00000018170	sall3b	98	57.883	Amphiprion_percula
ENSCPOG00000008546	SALL3	99	60.426	ENSATEG00000024524	sall3a	98	79.487	Anabas_testudineus
ENSCPOG00000008546	SALL3	72	59.933	ENSATEG00000004914	sall3b	98	52.198	Anabas_testudineus
ENSCPOG00000008546	SALL3	100	77.581	ENSAPLG00000013214	SALL3	99	77.284	Anas_platyrhynchos
ENSCPOG00000008546	SALL3	100	76.048	ENSACAG00000000478	SALL3	98	75.444	Anolis_carolinensis
ENSCPOG00000008546	SALL3	100	87.085	ENSANAG00000032412	SALL3	98	87.085	Aotus_nancymaae
ENSCPOG00000008546	SALL3	78	70.517	ENSACLG00000022451	sall3a	99	70.077	Astatotilapia_calliptera
ENSCPOG00000008546	SALL3	72	59.309	ENSACLG00000001619	sall3b	97	53.365	Astatotilapia_calliptera
ENSCPOG00000008546	SALL3	75	68.421	ENSAMXG00000035442	sall3b	84	68.421	Astyanax_mexicanus
ENSCPOG00000008546	SALL3	100	63.678	ENSAMXG00000011185	sall3a	98	76.364	Astyanax_mexicanus
ENSCPOG00000008546	SALL3	100	84.871	ENSBTAG00000050200	SALL3	97	86.885	Bos_taurus
ENSCPOG00000008546	SALL3	100	87.454	ENSCJAG00000007332	SALL3	97	87.454	Callithrix_jacchus
ENSCPOG00000008546	SALL3	91	81.272	ENSCAFG00000000013	SALL3	100	81.095	Canis_familiaris
ENSCPOG00000008546	SALL3	91	91.829	ENSCAFG00020015092	SALL3	99	91.829	Canis_lupus_dingo
ENSCPOG00000008546	SALL3	100	85.240	ENSCHIG00000000145	SALL3	98	85.240	Capra_hircus
ENSCPOG00000008546	SALL3	86	85.537	ENSTSYG00000028846	SALL3	99	85.650	Carlito_syrichta
ENSCPOG00000008546	SALL3	95	99.775	ENSCAPG00000006496	SALL3	99	99.775	Cavia_aperea
ENSCPOG00000008546	SALL3	99	78.741	ENSCCAG00000034863	SALL3	98	79.180	Cebus_capucinus
ENSCPOG00000008546	SALL3	99	89.668	ENSCATG00000029727	SALL3	98	89.668	Cercocebus_atys
ENSCPOG00000008546	SALL3	99	92.390	ENSCLAG00000007727	SALL3	99	92.804	Chinchilla_lanigera
ENSCPOG00000008546	SALL3	99	89.668	ENSCSAG00000018244	SALL3	98	89.668	Chlorocebus_sabaeus
ENSCPOG00000008546	SALL3	65	81.181	ENSCHOG00000013939	-	91	81.181	Choloepus_hoffmanni
ENSCPOG00000008546	SALL3	100	86.347	ENSCPBG00000003657	SALL3	98	86.347	Chrysemys_picta_bellii
ENSCPOG00000008546	SALL3	77	83.750	ENSCANG00000030302	SALL3	100	83.750	Colobus_angolensis_palliatus
ENSCPOG00000008546	SALL3	100	90.775	ENSCGRG00001018203	Sall3	98	90.775	Cricetulus_griseus_chok1gshd
ENSCPOG00000008546	SALL3	100	82.728	ENSCGRG00000017127	Sall3	100	83.469	Cricetulus_griseus_crigri
ENSCPOG00000008546	SALL3	74	67.545	ENSCSEG00000009058	sall3a	71	66.459	Cynoglossus_semilaevis
ENSCPOG00000008546	SALL3	76	58.974	ENSCSEG00000009569	sall3b	97	57.825	Cynoglossus_semilaevis
ENSCPOG00000008546	SALL3	96	86.275	ENSCVAG00000017005	sall3b	91	86.275	Cyprinodon_variegatus
ENSCPOG00000008546	SALL3	78	68.818	ENSCVAG00000009684	sall3a	95	68.757	Cyprinodon_variegatus
ENSCPOG00000008546	SALL3	100	60.031	ENSDARG00000079613	sall3a	73	67.111	Danio_rerio
ENSCPOG00000008546	SALL3	99	53.407	ENSDARG00000057586	sall3b	97	53.207	Danio_rerio
ENSCPOG00000008546	SALL3	74	81.323	ENSDNOG00000025483	SALL3	99	79.186	Dasypus_novemcinctus
ENSCPOG00000008546	SALL3	72	86.120	ENSDORG00000002702	Sall3	90	85.168	Dipodomys_ordii
ENSCPOG00000008546	SALL3	78	84.191	ENSETEG00000001481	SALL3	99	84.191	Echinops_telfairi
ENSCPOG00000008546	SALL3	100	80.323	ENSEASG00005002071	SALL3	98	80.468	Equus_asinus_asinus
ENSCPOG00000008546	SALL3	100	80.402	ENSECAG00000015414	SALL3	98	80.565	Equus_caballus
ENSCPOG00000008546	SALL3	98	52.354	ENSELUG00000009541	sall3b	97	51.534	Esox_lucius
ENSCPOG00000008546	SALL3	99	90.272	ENSFCAG00000028839	SALL3	97	90.272	Felis_catus
ENSCPOG00000008546	SALL3	100	77.742	ENSFALG00000013343	SALL3	98	77.688	Ficedula_albicollis
ENSCPOG00000008546	SALL3	100	91.516	ENSFDAG00000014697	SALL3	98	91.680	Fukomys_damarensis
ENSCPOG00000008546	SALL3	100	88.192	ENSGALG00000041404	SALL3	98	88.192	Gallus_gallus
ENSCPOG00000008546	SALL3	90	67.619	ENSGAFG00000001581	sall3a	97	69.923	Gambusia_affinis
ENSCPOG00000008546	SALL3	99	45.286	ENSGAFG00000014435	-	87	61.538	Gambusia_affinis
ENSCPOG00000008546	SALL3	99	76.863	ENSGACG00000005503	sall3a	70	76.863	Gasterosteus_aculeatus
ENSCPOG00000008546	SALL3	99	50.159	ENSGACG00000002533	sall3b	100	48.954	Gasterosteus_aculeatus
ENSCPOG00000008546	SALL3	100	77.805	ENSGAGG00000000925	SALL3	98	77.085	Gopherus_agassizii
ENSCPOG00000008546	SALL3	99	90.037	ENSGGOG00000008127	SALL3	98	90.037	Gorilla_gorilla
ENSCPOG00000008546	SALL3	76	59.309	ENSHBUG00000018127	sall3b	95	59.309	Haplochromis_burtoni
ENSCPOG00000008546	SALL3	100	92.339	ENSHGLG00000000824	SALL3	98	92.339	Heterocephalus_glaber_female
ENSCPOG00000008546	SALL3	100	90.115	ENSHGLG00100008694	SALL3	98	89.868	Heterocephalus_glaber_male
ENSCPOG00000008546	SALL3	84	63.462	ENSHCOG00000004745	sall3b	88	63.462	Hippocampus_comes
ENSCPOG00000008546	SALL3	99	54.824	ENSHCOG00000010423	sall3a	99	76.364	Hippocampus_comes
ENSCPOG00000008546	SALL3	99	49.802	ENSIPUG00000003006	sall3b	98	49.762	Ictalurus_punctatus
ENSCPOG00000008546	SALL3	100	86.249	ENSSTOG00000004145	SALL3	98	85.212	Ictidomys_tridecemlineatus
ENSCPOG00000008546	SALL3	99	92.251	ENSJJAG00000014351	Sall3	98	92.251	Jaculus_jaculus
ENSCPOG00000008546	SALL3	72	53.993	ENSKMAG00000012418	sall3b	99	48.786	Kryptolebias_marmoratus
ENSCPOG00000008546	SALL3	78	69.803	ENSKMAG00000003846	sall3a	99	69.714	Kryptolebias_marmoratus
ENSCPOG00000008546	SALL3	99	60.810	ENSLBEG00000005152	sall3a	98	60.275	Labrus_bergylta
ENSCPOG00000008546	SALL3	76	58.758	ENSLBEG00000015706	sall3b	95	58.686	Labrus_bergylta
ENSCPOG00000008546	SALL3	99	70.119	ENSLOCG00000007831	sall3a	98	69.328	Lepisosteus_oculatus
ENSCPOG00000008546	SALL3	100	85.978	ENSLAFG00000013521	SALL3	100	85.978	Loxodonta_africana
ENSCPOG00000008546	SALL3	92	89.668	ENSMFAG00000031402	SALL3	97	89.668	Macaca_fascicularis
ENSCPOG00000008546	SALL3	100	89.299	ENSMMUG00000000286	SALL3	78	89.299	Macaca_mulatta
ENSCPOG00000008546	SALL3	74	89.668	ENSMNEG00000029916	SALL3	99	89.668	Macaca_nemestrina
ENSCPOG00000008546	SALL3	99	59.786	ENSMAMG00000001276	sall3a	98	59.056	Mastacembelus_armatus
ENSCPOG00000008546	SALL3	79	58.499	ENSMAMG00000006101	sall3b	97	58.720	Mastacembelus_armatus
ENSCPOG00000008546	SALL3	72	59.040	ENSMZEG00005026224	sall3b	97	53.446	Maylandia_zebra
ENSCPOG00000008546	SALL3	78	70.517	ENSMZEG00005007586	sall3a	99	70.077	Maylandia_zebra
ENSCPOG00000008546	SALL3	100	77.733	ENSMGAG00000002297	SALL3	98	77.769	Meleagris_gallopavo
ENSCPOG00000008546	SALL3	100	90.775	ENSMAUG00000011828	Sall3	98	90.775	Mesocricetus_auratus
ENSCPOG00000008546	SALL3	99	88.192	ENSMICG00000017395	SALL3	97	85.973	Microcebus_murinus
ENSCPOG00000008546	SALL3	100	84.202	ENSMOCG00000013205	Sall3	98	84.121	Microtus_ochrogaster
ENSCPOG00000008546	SALL3	77	69.527	ENSMMOG00000003253	sall3a	98	69.492	Mola_mola
ENSCPOG00000008546	SALL3	77	58.241	ENSMMOG00000014246	sall3b	97	58.018	Mola_mola
ENSCPOG00000008546	SALL3	100	79.742	ENSMODG00000012231	SALL3	98	79.177	Monodelphis_domestica
ENSCPOG00000008546	SALL3	99	61.931	ENSMALG00000003343	sall3a	72	68.936	Monopterus_albus
ENSCPOG00000008546	SALL3	72	57.497	ENSMALG00000015200	sall3b	70	56.667	Monopterus_albus
ENSCPOG00000008546	SALL3	100	84.172	MGP_CAROLIEiJ_G0022442	Sall3	98	83.889	Mus_caroli
ENSCPOG00000008546	SALL3	100	84.334	ENSMUSG00000024565	Sall3	98	83.971	Mus_musculus
ENSCPOG00000008546	SALL3	100	84.540	MGP_PahariEiJ_G0019170	Sall3	98	83.795	Mus_pahari
ENSCPOG00000008546	SALL3	100	84.279	MGP_SPRETEiJ_G0023357	Sall3	98	83.916	Mus_spretus
ENSCPOG00000008546	SALL3	86	80.633	ENSMPUG00000016646	SALL3	99	80.819	Mustela_putorius_furo
ENSCPOG00000008546	SALL3	99	87.823	ENSMLUG00000010582	SALL3	100	87.823	Myotis_lucifugus
ENSCPOG00000008546	SALL3	100	92.251	ENSNGAG00000023772	Sall3	98	92.251	Nannospalax_galili
ENSCPOG00000008546	SALL3	76	59.420	ENSNBRG00000016034	sall3b	95	59.420	Neolamprologus_brichardi
ENSCPOG00000008546	SALL3	100	90.037	ENSNLEG00000008217	SALL3	98	90.037	Nomascus_leucogenys
ENSCPOG00000008546	SALL3	100	94.096	ENSODEG00000002692	SALL3	98	94.096	Octodon_degus
ENSCPOG00000008546	SALL3	72	68.308	ENSONIG00000007305	sall3a	72	67.607	Oreochromis_niloticus
ENSCPOG00000008546	SALL3	72	59.438	ENSONIG00000013791	sall3b	98	52.927	Oreochromis_niloticus
ENSCPOG00000008546	SALL3	52	83.248	ENSOANG00000010135	-	100	83.590	Ornithorhynchus_anatinus
ENSCPOG00000008546	SALL3	88	78.221	ENSOCUG00000029398	SALL3	98	78.520	Oryctolagus_cuniculus
ENSCPOG00000008546	SALL3	98	65.306	ENSOCUG00000004364	-	92	63.462	Oryctolagus_cuniculus
ENSCPOG00000008546	SALL3	99	61.515	ENSORLG00000020718	sall3a	98	59.159	Oryzias_latipes
ENSCPOG00000008546	SALL3	99	44.291	ENSORLG00020015105	sall3b	94	44.029	Oryzias_latipes_hni
ENSCPOG00000008546	SALL3	99	61.574	ENSORLG00020001794	sall3a	99	58.828	Oryzias_latipes_hni
ENSCPOG00000008546	SALL3	74	69.325	ENSORLG00015005877	sall3b	85	64.348	Oryzias_latipes_hsok
ENSCPOG00000008546	SALL3	99	61.650	ENSORLG00015018152	sall3a	98	71.667	Oryzias_latipes_hsok
ENSCPOG00000008546	SALL3	100	71.781	ENSOGAG00000031681	SALL3	98	88.561	Otolemur_garnettii
ENSCPOG00000008546	SALL3	81	82.500	ENSOARG00000004353	SALL3	99	80.812	Ovis_aries
ENSCPOG00000008546	SALL3	85	85.758	ENSPPAG00000029586	-	100	86.895	Pan_paniscus
ENSCPOG00000008546	SALL3	84	85.246	ENSPTRG00000010126	SALL3	98	90.406	Pan_troglodytes
ENSCPOG00000008546	SALL3	99	89.299	ENSPANG00000006485	SALL3	99	89.299	Papio_anubis
ENSCPOG00000008546	SALL3	99	81.818	ENSPKIG00000013427	sall3a	69	81.818	Paramormyrops_kingsleyae
ENSCPOG00000008546	SALL3	99	61.072	ENSPKIG00000018271	SALL3	98	71.253	Paramormyrops_kingsleyae
ENSCPOG00000008546	SALL3	100	77.240	ENSPSIG00000008556	SALL3	99	77.778	Pelodiscus_sinensis
ENSCPOG00000008546	SALL3	75	53.136	ENSPMGG00000002913	sall3b	95	53.220	Periophthalmus_magnuspinnatus
ENSCPOG00000008546	SALL3	99	60.810	ENSPMGG00000017042	sall3a	71	67.439	Periophthalmus_magnuspinnatus
ENSCPOG00000008546	SALL3	100	91.144	ENSPEMG00000022799	Sall3	98	91.144	Peromyscus_maniculatus_bairdii
ENSCPOG00000008546	SALL3	76	63.462	ENSPMAG00000004595	-	74	63.462	Petromyzon_marinus
ENSCPOG00000008546	SALL3	100	87.823	ENSPCIG00000002472	SALL3	98	87.823	Phascolarctos_cinereus
ENSCPOG00000008546	SALL3	98	45.148	ENSPFOG00000013292	sall3b	75	49.554	Poecilia_formosa
ENSCPOG00000008546	SALL3	99	76.562	ENSPLAG00000018123	sall3a	94	76.562	Poecilia_latipinna
ENSCPOG00000008546	SALL3	98	45.230	ENSPLAG00000013919	sall3b	71	49.554	Poecilia_latipinna
ENSCPOG00000008546	SALL3	75	49.151	ENSPMEG00000023703	sall3b	92	48.706	Poecilia_mexicana
ENSCPOG00000008546	SALL3	88	58.594	ENSPMEG00000014946	sall3a	93	57.576	Poecilia_mexicana
ENSCPOG00000008546	SALL3	88	58.340	ENSPREG00000014420	sall3a	93	57.420	Poecilia_reticulata
ENSCPOG00000008546	SALL3	99	45.857	ENSPREG00000015079	sall3b	97	44.968	Poecilia_reticulata
ENSCPOG00000008546	SALL3	99	79.218	ENSPPYG00000009253	SALL3	100	79.886	Pongo_abelii
ENSCPOG00000008546	SALL3	100	86.347	ENSPCAG00000006522	SALL3	100	86.347	Procavia_capensis
ENSCPOG00000008546	SALL3	84	88.561	ENSPCOG00000012553	SALL3	97	88.561	Propithecus_coquereli
ENSCPOG00000008546	SALL3	100	70.041	ENSPVAG00000014645	SALL3	99	70.226	Pteropus_vampyrus
ENSCPOG00000008546	SALL3	76	59.532	ENSPNYG00000005353	sall3b	95	59.643	Pundamilia_nyererei
ENSCPOG00000008546	SALL3	99	51.442	ENSPNAG00000017141	sall3b	98	51.244	Pygocentrus_nattereri
ENSCPOG00000008546	SALL3	88	91.513	ENSRNOG00000026116	Sall3	99	91.513	Rattus_norvegicus
ENSCPOG00000008546	SALL3	100	89.668	ENSRBIG00000036190	SALL3	78	89.668	Rhinopithecus_bieti
ENSCPOG00000008546	SALL3	91	89.299	ENSRROG00000034130	SALL3	98	89.299	Rhinopithecus_roxellana
ENSCPOG00000008546	SALL3	82	86.450	ENSSBOG00000023380	SALL3	100	87.013	Saimiri_boliviensis_boliviensis
ENSCPOG00000008546	SALL3	100	79.274	ENSSHAG00000015872	SALL3	98	78.710	Sarcophilus_harrisii
ENSCPOG00000008546	SALL3	80	76.596	ENSSFOG00015012223	sall3a	100	76.596	Scleropages_formosus
ENSCPOG00000008546	SALL3	99	59.259	ENSSFOG00015009159	SALL3	96	70.866	Scleropages_formosus
ENSCPOG00000008546	SALL3	99	51.843	ENSSMAG00000019762	sall3b	72	58.075	Scophthalmus_maximus
ENSCPOG00000008546	SALL3	99	61.300	ENSSMAG00000007674	sall3a	98	58.660	Scophthalmus_maximus
ENSCPOG00000008546	SALL3	77	60.576	ENSSDUG00000010584	sall3b	98	60.576	Seriola_dumerili
ENSCPOG00000008546	SALL3	99	63.216	ENSSDUG00000011099	sall3a	98	62.363	Seriola_dumerili
ENSCPOG00000008546	SALL3	99	53.127	ENSSLDG00000016800	sall3b	71	60.131	Seriola_lalandi_dorsalis
ENSCPOG00000008546	SALL3	99	63.137	ENSSLDG00000012706	sall3a	98	62.285	Seriola_lalandi_dorsalis
ENSCPOG00000008546	SALL3	75	58.597	ENSSPAG00000003172	sall3b	97	58.929	Stegastes_partitus
ENSCPOG00000008546	SALL3	88	69.399	ENSSPAG00000013114	sall3a	98	69.527	Stegastes_partitus
ENSCPOG00000008546	SALL3	100	85.609	ENSSSCG00000004858	SALL3	98	85.609	Sus_scrofa
ENSCPOG00000008546	SALL3	100	74.483	ENSTGUG00000006541	SALL3	99	74.363	Taeniopygia_guttata
ENSCPOG00000008546	SALL3	76	74.419	ENSTRUG00000017423	sall3a	99	74.419	Takifugu_rubripes
ENSCPOG00000008546	SALL3	73	67.391	ENSTRUG00000003369	sall3b	64	67.391	Takifugu_rubripes
ENSCPOG00000008546	SALL3	88	61.538	ENSTNIG00000001257	sall3a	98	61.538	Tetraodon_nigroviridis
ENSCPOG00000008546	SALL3	91	75.051	ENSTBEG00000008964	SALL3	80	75.000	Tupaia_belangeri
ENSCPOG00000008546	SALL3	81	78.210	ENSTTRG00000004958	SALL3	95	79.536	Tursiops_truncatus
ENSCPOG00000008546	SALL3	99	91.829	ENSUAMG00000016908	SALL3	97	91.829	Ursus_americanus
ENSCPOG00000008546	SALL3	80	85.714	ENSVVUG00000018838	SALL3	100	87.500	Vulpes_vulpes
ENSCPOG00000008546	SALL3	99	72.595	ENSXETG00000000845	sall3	97	71.903	Xenopus_tropicalis
ENSCPOG00000008546	SALL3	79	61.538	ENSXCOG00000018799	sall3b	97	61.538	Xiphophorus_couchianus
ENSCPOG00000008546	SALL3	88	58.333	ENSXMAG00000000798	sall3b	91	58.333	Xiphophorus_maculatus