EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000008552 (Gene tree)
Gene ID: 100722087
Gene Symbol: -
Alias: -
Full Name: pumilio RNA binding family member 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 35235 bases
Position: chrDS562876.1:16986385-17021619
Accession: 100722087
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007685	CPL	PF08144.11	4.7e-52	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000008629	-	3490	XM_003472193	ENSCPOP00000007685	648 (aa)	XP_003472241	H0VCL6

Gene Model

Click here to download ENSCPOG00000008552's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008552's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008552	-	99	88.099	ENSG00000080608	PUM3	100	87.963	Homo_sapiens
ENSCPOG00000008552	-	89	56.355	ENSAPOG00000020252	pum3	96	55.200	Acanthochromis_polyacanthus
ENSCPOG00000008552	-	97	88.590	ENSAMEG00000012187	PUM3	100	87.481	Ailuropoda_melanoleuca
ENSCPOG00000008552	-	86	55.258	ENSACIG00000009786	pum3	93	55.258	Amphilophus_citrinellus
ENSCPOG00000008552	-	82	60.561	ENSAOCG00000004439	pum3	96	55.609	Amphiprion_ocellaris
ENSCPOG00000008552	-	82	60.561	ENSAPEG00000020523	pum3	96	55.609	Amphiprion_percula
ENSCPOG00000008552	-	82	61.985	ENSATEG00000005799	pum3	95	57.724	Anabas_testudineus
ENSCPOG00000008552	-	96	72.464	ENSAPLG00000002920	PUM3	99	72.464	Anas_platyrhynchos
ENSCPOG00000008552	-	93	69.486	ENSACAG00000003174	PUM3	99	69.601	Anolis_carolinensis
ENSCPOG00000008552	-	99	88.390	ENSANAG00000024520	PUM3	100	88.253	Aotus_nancymaae
ENSCPOG00000008552	-	92	56.752	ENSACLG00000001017	pum3	86	59.750	Astatotilapia_calliptera
ENSCPOG00000008552	-	96	62.618	ENSAMXG00000020911	pum3	99	62.618	Astyanax_mexicanus
ENSCPOG00000008552	-	97	89.223	ENSBTAG00000013357	PUM3	100	88.408	Bos_taurus
ENSCPOG00000008552	-	75	32.394	WBGene00014165	puf-12	64	32.394	Caenorhabditis_elegans
ENSCPOG00000008552	-	99	86.687	ENSCJAG00000010917	PUM3	99	86.687	Callithrix_jacchus
ENSCPOG00000008552	-	97	88.273	ENSCAFG00000002035	PUM3	100	87.037	Canis_familiaris
ENSCPOG00000008552	-	97	88.114	ENSCAFG00020026867	PUM3	100	86.883	Canis_lupus_dingo
ENSCPOG00000008552	-	97	88.748	ENSCHIG00000021559	PUM3	100	87.790	Capra_hircus
ENSCPOG00000008552	-	99	87.635	ENSTSYG00000007481	PUM3	100	87.635	Carlito_syrichta
ENSCPOG00000008552	-	100	95.378	ENSCAPG00000010592	-	100	95.378	Cavia_aperea
ENSCPOG00000008552	-	99	86.997	ENSCCAG00000032650	PUM3	99	86.997	Cebus_capucinus
ENSCPOG00000008552	-	99	88.390	ENSCATG00000024880	PUM3	99	88.390	Cercocebus_atys
ENSCPOG00000008552	-	100	91.204	ENSCLAG00000011892	PUM3	100	91.204	Chinchilla_lanigera
ENSCPOG00000008552	-	99	88.700	ENSCSAG00000008691	PUM3	99	88.700	Chlorocebus_sabaeus
ENSCPOG00000008552	-	98	67.563	ENSCHOG00000002535	PUM3	95	67.284	Choloepus_hoffmanni
ENSCPOG00000008552	-	99	70.943	ENSCPBG00000025470	PUM3	95	70.943	Chrysemys_picta_bellii
ENSCPOG00000008552	-	81	40.585	ENSCING00000024199	-	96	40.585	Ciona_intestinalis
ENSCPOG00000008552	-	91	39.238	ENSCSAVG00000006072	-	99	40.952	Ciona_savignyi
ENSCPOG00000008552	-	99	88.390	ENSCANG00000006142	PUM3	99	88.390	Colobus_angolensis_palliatus
ENSCPOG00000008552	-	100	87.500	ENSCGRG00001016402	Pum3	100	87.500	Cricetulus_griseus_chok1gshd
ENSCPOG00000008552	-	100	87.500	ENSCGRG00000010207	Pum3	100	87.500	Cricetulus_griseus_crigri
ENSCPOG00000008552	-	78	59.496	ENSCSEG00000001565	pum3	97	56.591	Cynoglossus_semilaevis
ENSCPOG00000008552	-	51	51.481	ENSCVAG00000006550	pum3	95	51.838	Cyprinodon_variegatus
ENSCPOG00000008552	-	92	67.221	ENSDARG00000087779	pum3	93	67.221	Danio_rerio
ENSCPOG00000008552	-	100	75.883	ENSDNOG00000008157	PUM3	70	76.271	Dasypus_novemcinctus
ENSCPOG00000008552	-	81	82.543	ENSETEG00000015331	PUM3	84	82.601	Echinops_telfairi
ENSCPOG00000008552	-	80	40.684	ENSEBUG00000011586	pum3	77	40.684	Eptatretus_burgeri
ENSCPOG00000008552	-	97	89.683	ENSEASG00005010350	PUM3	99	88.700	Equus_asinus_asinus
ENSCPOG00000008552	-	97	89.841	ENSECAG00000017193	PUM3	99	88.854	Equus_caballus
ENSCPOG00000008552	-	91	79.762	ENSEEUG00000010314	PUM3	100	78.773	Erinaceus_europaeus
ENSCPOG00000008552	-	88	65.398	ENSELUG00000002215	pum3	90	65.398	Esox_lucius
ENSCPOG00000008552	-	98	70.801	ENSFALG00000010509	PUM3	98	70.801	Ficedula_albicollis
ENSCPOG00000008552	-	100	91.204	ENSFDAG00000021027	PUM3	100	91.204	Fukomys_damarensis
ENSCPOG00000008552	-	88	59.424	ENSFHEG00000015576	pum3	94	59.424	Fundulus_heteroclitus
ENSCPOG00000008552	-	83	61.007	ENSGMOG00000014217	pum3	99	61.007	Gadus_morhua
ENSCPOG00000008552	-	99	70.388	ENSGALG00000010178	PUM3	99	70.388	Gallus_gallus
ENSCPOG00000008552	-	55	61.433	ENSGAFG00000001930	pum3	62	61.433	Gambusia_affinis
ENSCPOG00000008552	-	82	60.526	ENSGACG00000017878	pum3	97	60.526	Gasterosteus_aculeatus
ENSCPOG00000008552	-	99	71.406	ENSGAGG00000018983	PUM3	99	72.089	Gopherus_agassizii
ENSCPOG00000008552	-	99	88.545	ENSGGOG00000006143	PUM3	100	88.408	Gorilla_gorilla
ENSCPOG00000008552	-	93	51.650	ENSHBUG00000012903	pum3	99	50.159	Haplochromis_burtoni
ENSCPOG00000008552	-	100	90.741	ENSHGLG00000015868	-	100	90.741	Heterocephalus_glaber_female
ENSCPOG00000008552	-	100	90.741	ENSHGLG00100018825	PUM3	100	90.881	Heterocephalus_glaber_male
ENSCPOG00000008552	-	91	58.347	ENSHCOG00000010306	pum3	94	56.804	Hippocampus_comes
ENSCPOG00000008552	-	87	66.431	ENSIPUG00000024801	pum3	94	64.204	Ictalurus_punctatus
ENSCPOG00000008552	-	99	89.645	ENSSTOG00000009586	PUM3	100	89.506	Ictidomys_tridecemlineatus
ENSCPOG00000008552	-	99	86.708	ENSJJAG00000012563	Pum3	99	86.708	Jaculus_jaculus
ENSCPOG00000008552	-	91	57.336	ENSKMAG00000010277	pum3	92	57.336	Kryptolebias_marmoratus
ENSCPOG00000008552	-	92	56.689	ENSLBEG00000012213	pum3	90	56.689	Labrus_bergylta
ENSCPOG00000008552	-	91	68.761	ENSLACG00000008312	PUM3	99	65.170	Latimeria_chalumnae
ENSCPOG00000008552	-	92	67.947	ENSLOCG00000012529	pum3	93	67.947	Lepisosteus_oculatus
ENSCPOG00000008552	-	98	87.500	ENSLAFG00000017341	PUM3	100	86.574	Loxodonta_africana
ENSCPOG00000008552	-	99	88.545	ENSMFAG00000001430	PUM3	99	88.545	Macaca_fascicularis
ENSCPOG00000008552	-	99	88.545	ENSMMUG00000002362	PUM3	98	88.545	Macaca_mulatta
ENSCPOG00000008552	-	99	88.545	ENSMNEG00000035288	PUM3	99	88.545	Macaca_nemestrina
ENSCPOG00000008552	-	99	88.854	ENSMLEG00000034820	PUM3	100	88.717	Mandrillus_leucophaeus
ENSCPOG00000008552	-	87	59.147	ENSMAMG00000022861	pum3	98	55.102	Mastacembelus_armatus
ENSCPOG00000008552	-	92	57.143	ENSMZEG00005014205	pum3	93	57.143	Maylandia_zebra
ENSCPOG00000008552	-	99	63.914	ENSMGAG00000002255	PUM3	100	63.914	Meleagris_gallopavo
ENSCPOG00000008552	-	100	87.346	ENSMAUG00000009733	Pum3	100	87.346	Mesocricetus_auratus
ENSCPOG00000008552	-	99	89.009	ENSMICG00000045916	PUM3	87	89.009	Microcebus_murinus
ENSCPOG00000008552	-	100	87.809	ENSMOCG00000019519	-	100	87.809	Microtus_ochrogaster
ENSCPOG00000008552	-	99	83.926	ENSMOCG00000014830	-	100	83.926	Microtus_ochrogaster
ENSCPOG00000008552	-	92	53.571	ENSMMOG00000012184	pum3	99	53.571	Mola_mola
ENSCPOG00000008552	-	99	65.881	ENSMODG00000015417	PUM3	88	71.651	Monodelphis_domestica
ENSCPOG00000008552	-	82	60.187	ENSMALG00000022164	pum3	90	56.219	Monopterus_albus
ENSCPOG00000008552	-	100	86.420	MGP_CAROLIEiJ_G0022845	Pum3	100	86.420	Mus_caroli
ENSCPOG00000008552	-	100	86.420	ENSMUSG00000041360	Pum3	100	86.420	Mus_musculus
ENSCPOG00000008552	-	99	86.399	MGP_PahariEiJ_G0014338	Pum3	99	86.399	Mus_pahari
ENSCPOG00000008552	-	100	86.420	MGP_SPRETEiJ_G0023763	Pum3	100	86.420	Mus_spretus
ENSCPOG00000008552	-	97	86.371	ENSMPUG00000005125	PUM3	100	85.317	Mustela_putorius_furo
ENSCPOG00000008552	-	99	87.307	ENSMLUG00000002309	PUM3	99	87.307	Myotis_lucifugus
ENSCPOG00000008552	-	99	85.208	ENSNGAG00000019468	Pum3	100	85.208	Nannospalax_galili
ENSCPOG00000008552	-	93	54.844	ENSNBRG00000021370	pum3	95	54.844	Neolamprologus_brichardi
ENSCPOG00000008552	-	99	88.545	ENSNLEG00000008712	PUM3	99	88.545	Nomascus_leucogenys
ENSCPOG00000008552	-	75	58.111	ENSMEUG00000013606	-	99	56.660	Notamacropus_eugenii
ENSCPOG00000008552	-	77	81.395	ENSOPRG00000004225	-	79	81.395	Ochotona_princeps
ENSCPOG00000008552	-	100	90.586	ENSODEG00000003625	-	100	90.586	Octodon_degus
ENSCPOG00000008552	-	99	84.615	ENSODEG00000016477	-	100	84.615	Octodon_degus
ENSCPOG00000008552	-	86	59.034	ENSONIG00000012733	pum3	85	59.034	Oreochromis_niloticus
ENSCPOG00000008552	-	81	78.220	ENSOANG00000014995	PUM3	100	78.428	Ornithorhynchus_anatinus
ENSCPOG00000008552	-	99	87.790	ENSOCUG00000004189	-	100	87.790	Oryctolagus_cuniculus
ENSCPOG00000008552	-	99	87.422	ENSOCUG00000026104	-	100	87.422	Oryctolagus_cuniculus
ENSCPOG00000008552	-	92	54.561	ENSORLG00000014935	pum3	99	53.271	Oryzias_latipes
ENSCPOG00000008552	-	92	54.620	ENSORLG00020002841	pum3	99	53.271	Oryzias_latipes_hni
ENSCPOG00000008552	-	95	53.115	ENSORLG00015015906	pum3	99	53.115	Oryzias_latipes_hsok
ENSCPOG00000008552	-	94	54.295	ENSOMEG00000009427	pum3	98	52.986	Oryzias_melastigma
ENSCPOG00000008552	-	99	87.500	ENSOGAG00000008125	-	100	87.500	Otolemur_garnettii
ENSCPOG00000008552	-	99	64.985	ENSOGAG00000033481	-	99	64.526	Otolemur_garnettii
ENSCPOG00000008552	-	97	88.152	ENSOARG00000013337	PUM3	100	87.365	Ovis_aries
ENSCPOG00000008552	-	99	88.408	ENSPPAG00000041337	PUM3	100	88.272	Pan_paniscus
ENSCPOG00000008552	-	99	86.399	ENSPPRG00000000809	PUM3	100	86.399	Panthera_pardus
ENSCPOG00000008552	-	99	86.708	ENSPTIG00000021934	PUM3	100	86.708	Panthera_tigris_altaica
ENSCPOG00000008552	-	99	88.563	ENSPTRG00000020735	PUM3	100	88.426	Pan_troglodytes
ENSCPOG00000008552	-	99	89.009	ENSPANG00000025118	PUM3	100	88.872	Papio_anubis
ENSCPOG00000008552	-	99	62.963	ENSPKIG00000022249	pum3	96	65.225	Paramormyrops_kingsleyae
ENSCPOG00000008552	-	99	71.097	ENSPSIG00000016272	PUM3	100	71.097	Pelodiscus_sinensis
ENSCPOG00000008552	-	76	60.692	ENSPMGG00000021261	pum3	98	60.692	Periophthalmus_magnuspinnatus
ENSCPOG00000008552	-	89	87.736	ENSPEMG00000019340	-	100	87.736	Peromyscus_maniculatus_bairdii
ENSCPOG00000008552	-	99	75.712	ENSPCIG00000030598	PUM3	90	75.712	Phascolarctos_cinereus
ENSCPOG00000008552	-	91	56.905	ENSPFOG00000001719	pum3	98	56.905	Poecilia_formosa
ENSCPOG00000008552	-	92	56.250	ENSPLAG00000020010	pum3	95	57.072	Poecilia_latipinna
ENSCPOG00000008552	-	92	56.250	ENSPMEG00000017451	pum3	95	57.237	Poecilia_mexicana
ENSCPOG00000008552	-	99	88.700	ENSPPYG00000019255	PUM3	99	88.700	Pongo_abelii
ENSCPOG00000008552	-	100	74.228	ENSPCAG00000005797	PUM3	95	74.228	Procavia_capensis
ENSCPOG00000008552	-	99	88.408	ENSPCOG00000027325	PUM3	100	88.408	Propithecus_coquereli
ENSCPOG00000008552	-	100	85.340	ENSPVAG00000016135	PUM3	95	85.340	Pteropus_vampyrus
ENSCPOG00000008552	-	95	55.988	ENSPNYG00000016124	pum3	99	55.988	Pundamilia_nyererei
ENSCPOG00000008552	-	96	62.739	ENSPNAG00000026524	pum3	99	62.739	Pygocentrus_nattereri
ENSCPOG00000008552	-	99	84.544	ENSRNOG00000048356	RGD1308750	100	84.544	Rattus_norvegicus
ENSCPOG00000008552	-	99	84.853	ENSRNOG00000012574	Pum3	100	84.853	Rattus_norvegicus
ENSCPOG00000008552	-	99	88.235	ENSRBIG00000036924	PUM3	100	88.099	Rhinopithecus_bieti
ENSCPOG00000008552	-	99	88.235	ENSRROG00000041089	PUM3	99	88.235	Rhinopithecus_roxellana
ENSCPOG00000008552	-	99	88.545	ENSSBOG00000028066	PUM3	99	88.545	Saimiri_boliviensis_boliviensis
ENSCPOG00000008552	-	99	75.153	ENSSHAG00000003730	PUM3	100	75.153	Sarcophilus_harrisii
ENSCPOG00000008552	-	92	65.196	ENSSFOG00015018778	pum3	99	61.412	Scleropages_formosus
ENSCPOG00000008552	-	86	60.036	ENSSMAG00000013236	pum3	97	56.151	Scophthalmus_maximus
ENSCPOG00000008552	-	92	58.097	ENSSDUG00000001887	pum3	88	58.097	Seriola_dumerili
ENSCPOG00000008552	-	92	57.930	ENSSLDG00000015766	pum3	99	55.130	Seriola_lalandi_dorsalis
ENSCPOG00000008552	-	96	84.814	ENSSARG00000000579	PUM3	100	84.814	Sorex_araneus
ENSCPOG00000008552	-	97	69.649	ENSSPUG00000001707	PUM3	100	68.315	Sphenodon_punctatus
ENSCPOG00000008552	-	82	60.187	ENSSPAG00000003976	pum3	83	60.187	Stegastes_partitus
ENSCPOG00000008552	-	97	88.748	ENSSSCG00000005227	PUM3	100	87.809	Sus_scrofa
ENSCPOG00000008552	-	99	70.186	ENSTGUG00000005339	PUM3	99	70.186	Taeniopygia_guttata
ENSCPOG00000008552	-	95	55.963	ENSTRUG00000004074	pum3	98	55.963	Takifugu_rubripes
ENSCPOG00000008552	-	90	59.450	ENSTNIG00000010325	pum3	96	59.167	Tetraodon_nigroviridis
ENSCPOG00000008552	-	99	62.809	ENSTBEG00000013058	PUM3	86	70.736	Tupaia_belangeri
ENSCPOG00000008552	-	97	80.349	ENSTTRG00000001062	PUM3	96	79.475	Tursiops_truncatus
ENSCPOG00000008552	-	97	80.032	ENSUMAG00000018443	PUM3	100	84.557	Ursus_maritimus
ENSCPOG00000008552	-	100	87.057	ENSVPAG00000010766	PUM3	99	87.057	Vicugna_pacos
ENSCPOG00000008552	-	97	88.273	ENSVVUG00000006527	PUM3	100	87.037	Vulpes_vulpes
ENSCPOG00000008552	-	99	57.960	ENSXETG00000011707	pum3	99	57.960	Xenopus_tropicalis
ENSCPOG00000008552	-	91	54.925	ENSXCOG00000006725	pum3	99	54.925	Xiphophorus_couchianus
ENSCPOG00000008552	-	92	56.507	ENSXMAG00000002926	pum3	95	56.507	Xiphophorus_maculatus