EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000008743 (Gene tree)
Gene ID: 100723203
Gene Symbol: GTSF1
Alias: FAM112B|FLJ32942
Full Name: gametocyte specific factor 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 13604 bases
Position: chrDS562864.1:45365740-45379343
Accession: 100723203
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000007849	zf-U11-48K	PF05253.12	3.8e-20	1	2
ENSCPOP00000007849	zf-U11-48K	PF05253.12	3.8e-20	2	2
ENSCPOP00000031111	zf-U11-48K	PF05253.12	4.5e-20	1	2
ENSCPOP00000031111	zf-U11-48K	PF05253.12	4.5e-20	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000039982	GTSF1-202	661	-	ENSCPOP00000031111	186 (aa)	-	A0A286XZX2
ENSCPOT00000008821	GTSF1-201	610	XM_003476017	ENSCPOP00000007849	167 (aa)	XP_003476065	H0VD11

Gene Model

Click here to download ENSCPOG00000008743's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008743's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000008743	GTSF1	61	34.906	ENSCPOG00000008201	GTSF1L	75	34.906

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008743	GTSF1	100	91.018	ENSG00000170627	GTSF1	100	91.018	Homo_sapiens
ENSCPOG00000008743	GTSF1	88	45.638	ENSAPOG00000022724	-	95	45.638	Acanthochromis_polyacanthus
ENSCPOG00000008743	GTSF1	97	96.914	ENSAMEG00000000939	GTSF1	99	94.578	Ailuropoda_melanoleuca
ENSCPOG00000008743	GTSF1	88	44.295	ENSAOCG00000022214	-	72	42.675	Amphiprion_ocellaris
ENSCPOG00000008743	GTSF1	77	58.915	ENSAPLG00000004814	GTSF1	95	58.915	Anas_platyrhynchos
ENSCPOG00000008743	GTSF1	69	49.138	ENSACAG00000029590	-	95	49.138	Anolis_carolinensis
ENSCPOG00000008743	GTSF1	97	62.346	ENSACAG00000014260	-	94	62.346	Anolis_carolinensis
ENSCPOG00000008743	GTSF1	100	90.419	ENSANAG00000024529	GTSF1	100	90.419	Aotus_nancymaae
ENSCPOG00000008743	GTSF1	100	94.611	ENSBTAG00000018085	GTSF1	100	94.611	Bos_taurus
ENSCPOG00000008743	GTSF1	100	85.629	ENSCJAG00000039915	-	88	85.629	Callithrix_jacchus
ENSCPOG00000008743	GTSF1	100	91.018	ENSCJAG00000018968	-	100	91.018	Callithrix_jacchus
ENSCPOG00000008743	GTSF1	100	97.006	ENSCAFG00000006465	-	100	97.006	Canis_familiaris
ENSCPOG00000008743	GTSF1	100	97.006	ENSCAFG00020020373	-	94	96.341	Canis_lupus_dingo
ENSCPOG00000008743	GTSF1	98	93.865	ENSCHIG00000012215	-	96	93.293	Capra_hircus
ENSCPOG00000008743	GTSF1	100	74.251	ENSTSYG00000035266	-	100	74.251	Carlito_syrichta
ENSCPOG00000008743	GTSF1	99	92.771	ENSTSYG00000004679	-	100	92.771	Carlito_syrichta
ENSCPOG00000008743	GTSF1	96	67.702	ENSCCAG00000032808	GTSF1	100	67.702	Cebus_capucinus
ENSCPOG00000008743	GTSF1	100	91.018	ENSCATG00000036328	GTSF1	100	91.018	Cercocebus_atys
ENSCPOG00000008743	GTSF1	100	98.204	ENSCLAG00000012811	GTSF1	100	98.204	Chinchilla_lanigera
ENSCPOG00000008743	GTSF1	94	91.083	ENSCSAG00000005394	GTSF1	100	90.506	Chlorocebus_sabaeus
ENSCPOG00000008743	GTSF1	100	94.611	ENSCHOG00000001659	GTSF1	100	94.611	Choloepus_hoffmanni
ENSCPOG00000008743	GTSF1	95	61.250	ENSCPBG00000024905	-	86	61.250	Chrysemys_picta_bellii
ENSCPOG00000008743	GTSF1	99	70.482	ENSCPBG00000005134	-	72	70.482	Chrysemys_picta_bellii
ENSCPOG00000008743	GTSF1	100	89.820	ENSCANG00000033118	GTSF1	100	89.820	Colobus_angolensis_palliatus
ENSCPOG00000008743	GTSF1	100	85.629	ENSCANG00000031776	-	100	85.629	Colobus_angolensis_palliatus
ENSCPOG00000008743	GTSF1	100	97.605	ENSCGRG00001013814	Gtsf1	100	97.605	Cricetulus_griseus_chok1gshd
ENSCPOG00000008743	GTSF1	100	97.605	ENSCGRG00000007733	Gtsf1	100	97.605	Cricetulus_griseus_crigri
ENSCPOG00000008743	GTSF1	94	94.268	ENSDNOG00000001438	-	90	94.268	Dasypus_novemcinctus
ENSCPOG00000008743	GTSF1	100	97.605	ENSDORG00000003228	Gtsf1	100	97.605	Dipodomys_ordii
ENSCPOG00000008743	GTSF1	100	93.413	ENSETEG00000009310	GTSF1	100	93.413	Echinops_telfairi
ENSCPOG00000008743	GTSF1	100	95.808	ENSEASG00005010260	GTSF1	90	95.808	Equus_asinus_asinus
ENSCPOG00000008743	GTSF1	100	95.808	ENSECAG00000013618	GTSF1	100	95.808	Equus_caballus
ENSCPOG00000008743	GTSF1	100	96.407	ENSEEUG00000005185	GTSF1	100	96.407	Erinaceus_europaeus
ENSCPOG00000008743	GTSF1	100	67.066	ENSFCAG00000023672	-	100	60.753	Felis_catus
ENSCPOG00000008743	GTSF1	100	97.006	ENSFCAG00000010156	-	100	97.006	Felis_catus
ENSCPOG00000008743	GTSF1	75	53.175	ENSFALG00000007613	-	100	53.175	Ficedula_albicollis
ENSCPOG00000008743	GTSF1	100	92.814	ENSFDAG00000009383	GTSF1	100	92.814	Fukomys_damarensis
ENSCPOG00000008743	GTSF1	92	55.195	ENSGALG00000001109	GTSF1	95	55.195	Gallus_gallus
ENSCPOG00000008743	GTSF1	88	50.340	ENSGACG00000010783	-	80	50.340	Gasterosteus_aculeatus
ENSCPOG00000008743	GTSF1	62	51.887	ENSGAGG00000016342	-	99	51.887	Gopherus_agassizii
ENSCPOG00000008743	GTSF1	99	62.275	ENSGAGG00000011062	GTSF1	86	62.275	Gopherus_agassizii
ENSCPOG00000008743	GTSF1	66	45.045	ENSGAGG00000018216	-	89	45.045	Gopherus_agassizii
ENSCPOG00000008743	GTSF1	100	91.018	ENSGGOG00000016063	GTSF1	100	91.018	Gorilla_gorilla
ENSCPOG00000008743	GTSF1	100	95.210	ENSHGLG00000002436	GTSF1	100	95.210	Heterocephalus_glaber_female
ENSCPOG00000008743	GTSF1	100	95.210	ENSHGLG00100017301	GTSF1	100	95.210	Heterocephalus_glaber_male
ENSCPOG00000008743	GTSF1	93	47.771	ENSIPUG00000002483	-	82	48.052	Ictalurus_punctatus
ENSCPOG00000008743	GTSF1	100	98.204	ENSSTOG00000025170	GTSF1	100	98.204	Ictidomys_tridecemlineatus
ENSCPOG00000008743	GTSF1	100	86.228	ENSJJAG00000017442	-	97	90.260	Jaculus_jaculus
ENSCPOG00000008743	GTSF1	100	92.216	ENSJJAG00000003323	-	100	92.216	Jaculus_jaculus
ENSCPOG00000008743	GTSF1	88	48.980	ENSKMAG00000006038	-	80	48.980	Kryptolebias_marmoratus
ENSCPOG00000008743	GTSF1	95	60.759	ENSLACG00000008870	GTSF1	87	58.333	Latimeria_chalumnae
ENSCPOG00000008743	GTSF1	97	96.914	ENSLAFG00000016318	GTSF1	100	97.006	Loxodonta_africana
ENSCPOG00000008743	GTSF1	100	91.018	ENSMFAG00000041178	GTSF1	100	91.018	Macaca_fascicularis
ENSCPOG00000008743	GTSF1	100	91.018	ENSMMUG00000003758	GTSF1	100	91.018	Macaca_mulatta
ENSCPOG00000008743	GTSF1	100	91.018	ENSMNEG00000036779	GTSF1	100	91.018	Macaca_nemestrina
ENSCPOG00000008743	GTSF1	100	90.419	ENSMLEG00000028375	GTSF1	100	90.419	Mandrillus_leucophaeus
ENSCPOG00000008743	GTSF1	75	57.480	ENSMGAG00000000685	GTSF1	90	57.480	Meleagris_gallopavo
ENSCPOG00000008743	GTSF1	100	73.054	ENSMAUG00000018746	Gtsf1	99	73.054	Mesocricetus_auratus
ENSCPOG00000008743	GTSF1	100	96.407	ENSMICG00000008444	-	100	96.407	Microcebus_murinus
ENSCPOG00000008743	GTSF1	100	97.006	ENSMOCG00000018889	Gtsf1	100	97.006	Microtus_ochrogaster
ENSCPOG00000008743	GTSF1	100	87.425	ENSMODG00000019422	GTSF1	100	87.425	Monodelphis_domestica
ENSCPOG00000008743	GTSF1	100	98.204	MGP_CAROLIEiJ_G0020379	Gtsf1	100	99.213	Mus_caroli
ENSCPOG00000008743	GTSF1	100	98.204	ENSMUSG00000022487	Gtsf1	100	99.213	Mus_musculus
ENSCPOG00000008743	GTSF1	100	97.605	MGP_PahariEiJ_G0020378	Gtsf1	100	98.425	Mus_pahari
ENSCPOG00000008743	GTSF1	100	98.204	MGP_SPRETEiJ_G0021272	Gtsf1	100	99.213	Mus_spretus
ENSCPOG00000008743	GTSF1	100	95.210	ENSMPUG00000019323	-	100	95.210	Mustela_putorius_furo
ENSCPOG00000008743	GTSF1	98	96.951	ENSMPUG00000005669	-	98	96.951	Mustela_putorius_furo
ENSCPOG00000008743	GTSF1	100	88.623	ENSMPUG00000019140	-	100	88.623	Mustela_putorius_furo
ENSCPOG00000008743	GTSF1	100	91.617	ENSMLUG00000026557	-	100	91.617	Myotis_lucifugus
ENSCPOG00000008743	GTSF1	100	94.611	ENSMLUG00000012961	-	100	94.611	Myotis_lucifugus
ENSCPOG00000008743	GTSF1	100	97.006	ENSNGAG00000014213	Gtsf1	100	97.006	Nannospalax_galili
ENSCPOG00000008743	GTSF1	100	90.419	ENSNLEG00000017635	GTSF1	100	90.419	Nomascus_leucogenys
ENSCPOG00000008743	GTSF1	100	77.246	ENSMEUG00000016206	GTSF1	100	77.246	Notamacropus_eugenii
ENSCPOG00000008743	GTSF1	100	68.862	ENSOPRG00000017277	GTSF1	100	68.862	Ochotona_princeps
ENSCPOG00000008743	GTSF1	100	97.605	ENSODEG00000014220	GTSF1	100	97.605	Octodon_degus
ENSCPOG00000008743	GTSF1	99	69.277	ENSOANG00000011386	GTSF1	99	69.277	Ornithorhynchus_anatinus
ENSCPOG00000008743	GTSF1	100	95.808	ENSOCUG00000024495	GTSF1	100	95.808	Oryctolagus_cuniculus
ENSCPOG00000008743	GTSF1	76	44.961	ENSORLG00015005017	-	70	51.327	Oryzias_latipes_hsok
ENSCPOG00000008743	GTSF1	95	94.340	ENSOGAG00000017227	GTSF1	94	94.340	Otolemur_garnettii
ENSCPOG00000008743	GTSF1	100	95.210	ENSOARG00000016162	GTSF1	100	95.210	Ovis_aries
ENSCPOG00000008743	GTSF1	100	91.018	ENSPPAG00000028506	GTSF1	100	91.018	Pan_paniscus
ENSCPOG00000008743	GTSF1	100	86.228	ENSPPRG00000017612	-	91	86.228	Panthera_pardus
ENSCPOG00000008743	GTSF1	100	97.006	ENSPPRG00000004344	-	100	97.006	Panthera_pardus
ENSCPOG00000008743	GTSF1	100	97.006	ENSPTIG00000020415	-	100	97.006	Panthera_tigris_altaica
ENSCPOG00000008743	GTSF1	100	86.826	ENSPTIG00000010868	-	91	86.826	Panthera_tigris_altaica
ENSCPOG00000008743	GTSF1	100	91.018	ENSPTRG00000005041	GTSF1	100	91.018	Pan_troglodytes
ENSCPOG00000008743	GTSF1	100	91.018	ENSPANG00000020579	GTSF1	100	91.018	Papio_anubis
ENSCPOG00000008743	GTSF1	98	68.485	ENSPSIG00000009968	GTSF1	81	68.485	Pelodiscus_sinensis
ENSCPOG00000008743	GTSF1	83	44.966	ENSPSIG00000009839	-	93	44.966	Pelodiscus_sinensis
ENSCPOG00000008743	GTSF1	100	97.605	ENSPEMG00000009595	Gtsf1	100	97.605	Peromyscus_maniculatus_bairdii
ENSCPOG00000008743	GTSF1	100	82.635	ENSPCIG00000006731	GTSF1	100	82.635	Phascolarctos_cinereus
ENSCPOG00000008743	GTSF1	100	91.018	ENSPPYG00000004605	GTSF1	100	91.018	Pongo_abelii
ENSCPOG00000008743	GTSF1	100	96.407	ENSPCOG00000016907	-	100	96.407	Propithecus_coquereli
ENSCPOG00000008743	GTSF1	97	83.951	ENSPCOG00000015201	-	100	80.982	Propithecus_coquereli
ENSCPOG00000008743	GTSF1	100	96.407	ENSPVAG00000000333	GTSF1	100	96.407	Pteropus_vampyrus
ENSCPOG00000008743	GTSF1	90	48.026	ENSPNAG00000005737	-	82	48.026	Pygocentrus_nattereri
ENSCPOG00000008743	GTSF1	100	98.204	ENSRNOG00000036831	Gtsf1	88	98.204	Rattus_norvegicus
ENSCPOG00000008743	GTSF1	100	90.419	ENSRBIG00000043438	-	100	90.419	Rhinopithecus_bieti
ENSCPOG00000008743	GTSF1	100	82.635	ENSRBIG00000039916	-	98	73.770	Rhinopithecus_bieti
ENSCPOG00000008743	GTSF1	100	91.018	ENSRROG00000008137	GTSF1	100	91.018	Rhinopithecus_roxellana
ENSCPOG00000008743	GTSF1	100	91.617	ENSSBOG00000029460	GTSF1	100	91.617	Saimiri_boliviensis_boliviensis
ENSCPOG00000008743	GTSF1	100	87.425	ENSSHAG00000011633	GTSF1	100	87.425	Sarcophilus_harrisii
ENSCPOG00000008743	GTSF1	78	96.154	ENSSARG00000004928	GTSF1	78	96.154	Sorex_araneus
ENSCPOG00000008743	GTSF1	98	50.920	ENSSPUG00000010064	GTSF1	93	70.909	Sphenodon_punctatus
ENSCPOG00000008743	GTSF1	100	95.808	ENSSSCG00000026333	GTSF1	100	95.808	Sus_scrofa
ENSCPOG00000008743	GTSF1	76	55.469	ENSTGUG00000002008	-	100	55.469	Taeniopygia_guttata
ENSCPOG00000008743	GTSF1	96	95.031	ENSTBEG00000006154	GTSF1	100	95.031	Tupaia_belangeri
ENSCPOG00000008743	GTSF1	100	94.012	ENSTTRG00000004470	GTSF1	100	94.012	Tursiops_truncatus
ENSCPOG00000008743	GTSF1	100	97.006	ENSUAMG00000021669	GTSF1	94	96.341	Ursus_americanus
ENSCPOG00000008743	GTSF1	100	97.006	ENSUMAG00000011279	GTSF1	100	97.006	Ursus_maritimus
ENSCPOG00000008743	GTSF1	100	95.210	ENSVPAG00000007016	GTSF1	100	95.210	Vicugna_pacos
ENSCPOG00000008743	GTSF1	100	97.006	ENSVVUG00000023687	-	84	97.006	Vulpes_vulpes
ENSCPOG00000008743	GTSF1	96	63.975	ENSXETG00000033546	gtsf1	71	63.975	Xenopus_tropicalis