EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000008906 (Gene tree)
Gene ID: 100733436
Gene Symbol: SMG7
Alias: C1orf16|EST1C|KIAA0250|SGA56M|SMG-7
Full Name: SMG7%2C nonsense mediated mRNA decay factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 52393 bases
Position: chrDS562867.1:1294255-1346647
Accession: 100733436
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008000	EST1	PF10374.9	6.3e-25	1	1
ENSCPOP00000026615	EST1	PF10374.9	6.6e-25	1	1
ENSCPOP00000008000	EST1_DNA_bind	PF10373.9	6.4e-56	1	1
ENSCPOP00000026615	EST1_DNA_bind	PF10373.9	6.7e-56	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000046523	SMG7-201	3679	XM_003474919	ENSCPOP00000026615	1165 (aa)	XP_003474967	A0A286XMC4
ENSCPOT00000008986	SMG7-202	3408	-	ENSCPOP00000008000	1135 (aa)	-	H0VDF0

Gene Model

Click here to download ENSCPOG00000008906's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008906's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008906	SMG7	100	97.599	ENSG00000116698	SMG7	100	97.619	Homo_sapiens
ENSCPOG00000008906	SMG7	88	71.385	ENSAPOG00000009611	smg7	95	71.861	Acanthochromis_polyacanthus
ENSCPOG00000008906	SMG7	97	93.182	ENSAMEG00000002357	SMG7	100	93.182	Ailuropoda_melanoleuca
ENSCPOG00000008906	SMG7	97	60.616	ENSACIG00000015152	smg7	100	61.097	Amphilophus_citrinellus
ENSCPOG00000008906	SMG7	99	63.336	ENSAOCG00000013538	smg7	99	64.503	Amphiprion_ocellaris
ENSCPOG00000008906	SMG7	99	63.201	ENSAPEG00000007851	smg7	99	64.368	Amphiprion_percula
ENSCPOG00000008906	SMG7	99	61.120	ENSATEG00000006931	smg7	99	62.520	Anabas_testudineus
ENSCPOG00000008906	SMG7	99	81.029	ENSAPLG00000015811	SMG7	99	81.995	Anas_platyrhynchos
ENSCPOG00000008906	SMG7	99	83.516	ENSACAG00000014989	SMG7	99	84.525	Anolis_carolinensis
ENSCPOG00000008906	SMG7	100	93.564	ENSANAG00000028114	SMG7	99	93.564	Aotus_nancymaae
ENSCPOG00000008906	SMG7	99	63.877	ENSACLG00000022079	smg7	99	64.575	Astatotilapia_calliptera
ENSCPOG00000008906	SMG7	99	66.359	ENSAMXG00000020809	smg7	99	67.477	Astyanax_mexicanus
ENSCPOG00000008906	SMG7	100	95.197	ENSBTAG00000008003	SMG7	99	95.283	Bos_taurus
ENSCPOG00000008906	SMG7	100	97.170	ENSCJAG00000005135	SMG7	100	97.170	Callithrix_jacchus
ENSCPOG00000008906	SMG7	100	97.082	ENSCAFG00000013276	SMG7	99	97.082	Canis_familiaris
ENSCPOG00000008906	SMG7	100	97.082	ENSCAFG00020015475	SMG7	99	97.082	Canis_lupus_dingo
ENSCPOG00000008906	SMG7	99	94.440	ENSCHIG00000018192	SMG7	99	95.410	Capra_hircus
ENSCPOG00000008906	SMG7	100	96.741	ENSTSYG00000002667	SMG7	99	96.741	Carlito_syrichta
ENSCPOG00000008906	SMG7	97	93.362	ENSCCAG00000028596	SMG7	100	93.362	Cebus_capucinus
ENSCPOG00000008906	SMG7	100	97.770	ENSCATG00000011063	SMG7	99	97.770	Cercocebus_atys
ENSCPOG00000008906	SMG7	100	98.285	ENSCLAG00000010751	SMG7	100	98.259	Chinchilla_lanigera
ENSCPOG00000008906	SMG7	100	97.599	ENSCSAG00000012654	SMG7	99	97.599	Chlorocebus_sabaeus
ENSCPOG00000008906	SMG7	92	87.966	ENSCHOG00000010522	SMG7	93	88.443	Choloepus_hoffmanni
ENSCPOG00000008906	SMG7	99	87.563	ENSCPBG00000015724	SMG7	99	87.869	Chrysemys_picta_bellii
ENSCPOG00000008906	SMG7	97	93.624	ENSCANG00000015680	SMG7	100	93.624	Colobus_angolensis_palliatus
ENSCPOG00000008906	SMG7	100	95.883	ENSCGRG00001013705	Smg7	100	95.712	Cricetulus_griseus_chok1gshd
ENSCPOG00000008906	SMG7	99	95.822	ENSCGRG00000018401	Smg7	100	95.648	Cricetulus_griseus_crigri
ENSCPOG00000008906	SMG7	93	68.500	ENSCVAG00000011842	smg7	100	62.635	Cyprinodon_variegatus
ENSCPOG00000008906	SMG7	99	65.805	ENSDARG00000060767	smg7	99	66.556	Danio_rerio
ENSCPOG00000008906	SMG7	99	96.171	ENSDORG00000007331	Smg7	100	96.171	Dipodomys_ordii
ENSCPOG00000008906	SMG7	96	93.978	ENSETEG00000002654	SMG7	99	94.891	Echinops_telfairi
ENSCPOG00000008906	SMG7	100	97.341	ENSEASG00005006524	SMG7	99	97.341	Equus_asinus_asinus
ENSCPOG00000008906	SMG7	100	97.427	ENSECAG00000004313	SMG7	99	97.427	Equus_caballus
ENSCPOG00000008906	SMG7	95	96.310	ENSEEUG00000002024	SMG7	92	96.310	Erinaceus_europaeus
ENSCPOG00000008906	SMG7	99	64.487	ENSELUG00000010293	smg7	99	65.157	Esox_lucius
ENSCPOG00000008906	SMG7	100	97.253	ENSFCAG00000010900	SMG7	99	97.253	Felis_catus
ENSCPOG00000008906	SMG7	99	82.908	ENSFALG00000003047	SMG7	100	82.568	Ficedula_albicollis
ENSCPOG00000008906	SMG7	99	97.859	ENSFDAG00000012121	SMG7	99	97.861	Fukomys_damarensis
ENSCPOG00000008906	SMG7	99	59.567	ENSFHEG00000011073	smg7	99	60.430	Fundulus_heteroclitus
ENSCPOG00000008906	SMG7	89	66.276	ENSGMOG00000004916	smg7	92	67.151	Gadus_morhua
ENSCPOG00000008906	SMG7	99	81.029	ENSGALG00000004667	SMG7	99	81.872	Gallus_gallus
ENSCPOG00000008906	SMG7	99	60.017	ENSGAFG00000019000	smg7	99	60.614	Gambusia_affinis
ENSCPOG00000008906	SMG7	97	63.596	ENSGACG00000001634	smg7	99	64.654	Gasterosteus_aculeatus
ENSCPOG00000008906	SMG7	100	97.513	ENSGGOG00000002342	SMG7	99	97.513	Gorilla_gorilla
ENSCPOG00000008906	SMG7	99	63.877	ENSHBUG00000003726	smg7	97	72.589	Haplochromis_burtoni
ENSCPOG00000008906	SMG7	99	97.948	ENSHGLG00000009353	SMG7	100	97.950	Heterocephalus_glaber_female
ENSCPOG00000008906	SMG7	99	89.144	ENSHGLG00100004878	-	99	89.673	Heterocephalus_glaber_male
ENSCPOG00000008906	SMG7	99	96.253	ENSHGLG00100009637	-	100	96.257	Heterocephalus_glaber_male
ENSCPOG00000008906	SMG7	99	66.751	ENSIPUG00000016997	smg7	99	67.929	Ictalurus_punctatus
ENSCPOG00000008906	SMG7	99	97.824	ENSSTOG00000000401	SMG7	100	97.824	Ictidomys_tridecemlineatus
ENSCPOG00000008906	SMG7	99	93.645	ENSJJAG00000012351	Smg7	99	94.528	Jaculus_jaculus
ENSCPOG00000008906	SMG7	97	58.002	ENSKMAG00000004900	smg7	100	58.833	Kryptolebias_marmoratus
ENSCPOG00000008906	SMG7	99	61.777	ENSLBEG00000002983	smg7	99	62.063	Labrus_bergylta
ENSCPOG00000008906	SMG7	99	74.956	ENSLACG00000000972	SMG7	99	75.847	Latimeria_chalumnae
ENSCPOG00000008906	SMG7	99	66.639	ENSLOCG00000002010	smg7	99	67.251	Lepisosteus_oculatus
ENSCPOG00000008906	SMG7	99	96.780	ENSLAFG00000008186	SMG7	100	96.780	Loxodonta_africana
ENSCPOG00000008906	SMG7	100	97.684	ENSMFAG00000031653	SMG7	99	97.684	Macaca_fascicularis
ENSCPOG00000008906	SMG7	100	97.770	ENSMMUG00000018458	SMG7	99	97.770	Macaca_mulatta
ENSCPOG00000008906	SMG7	97	93.712	ENSMNEG00000034798	SMG7	100	93.712	Macaca_nemestrina
ENSCPOG00000008906	SMG7	100	97.770	ENSMLEG00000037170	SMG7	99	97.770	Mandrillus_leucophaeus
ENSCPOG00000008906	SMG7	87	62.419	ENSMAMG00000018733	smg7	84	66.102	Mastacembelus_armatus
ENSCPOG00000008906	SMG7	99	63.749	ENSMZEG00005015247	smg7	99	64.410	Maylandia_zebra
ENSCPOG00000008906	SMG7	98	80.567	ENSMGAG00000001561	SMG7	98	81.320	Meleagris_gallopavo
ENSCPOG00000008906	SMG7	99	96.258	ENSMAUG00000019484	Smg7	100	96.258	Mesocricetus_auratus
ENSCPOG00000008906	SMG7	99	97.648	ENSMICG00000007145	SMG7	100	97.648	Microcebus_murinus
ENSCPOG00000008906	SMG7	99	96.258	ENSMOCG00000020748	Smg7	100	96.258	Microtus_ochrogaster
ENSCPOG00000008906	SMG7	99	59.462	ENSMMOG00000001524	smg7	99	60.300	Mola_mola
ENSCPOG00000008906	SMG7	92	84.004	ENSMODG00000007139	SMG7	99	84.455	Monodelphis_domestica
ENSCPOG00000008906	SMG7	96	68.159	ENSMALG00000000061	smg7	95	68.657	Monopterus_albus
ENSCPOG00000008906	SMG7	99	95.822	MGP_CAROLIEiJ_G0014704	Smg7	100	95.300	Mus_caroli
ENSCPOG00000008906	SMG7	99	95.735	ENSMUSG00000042772	Smg7	100	95.561	Mus_musculus
ENSCPOG00000008906	SMG7	99	95.735	MGP_PahariEiJ_G0027940	Smg7	100	95.561	Mus_pahari
ENSCPOG00000008906	SMG7	99	95.822	MGP_SPRETEiJ_G0015511	Smg7	100	95.648	Mus_spretus
ENSCPOG00000008906	SMG7	99	96.964	ENSMPUG00000011732	SMG7	97	96.967	Mustela_putorius_furo
ENSCPOG00000008906	SMG7	99	94.616	ENSMLUG00000015417	SMG7	99	96.205	Myotis_lucifugus
ENSCPOG00000008906	SMG7	99	96.341	ENSNGAG00000009836	Smg7	100	96.341	Nannospalax_galili
ENSCPOG00000008906	SMG7	99	57.776	ENSNBRG00000024343	smg7	99	70.476	Neolamprologus_brichardi
ENSCPOG00000008906	SMG7	100	97.770	ENSNLEG00000018018	SMG7	99	97.770	Nomascus_leucogenys
ENSCPOG00000008906	SMG7	78	85.007	ENSMEUG00000004681	SMG7	77	85.356	Notamacropus_eugenii
ENSCPOG00000008906	SMG7	96	83.729	ENSOPRG00000013942	SMG7	96	84.644	Ochotona_princeps
ENSCPOG00000008906	SMG7	99	98.433	ENSODEG00000010390	SMG7	100	98.433	Octodon_degus
ENSCPOG00000008906	SMG7	99	61.079	ENSONIG00000000277	smg7	99	61.869	Oreochromis_niloticus
ENSCPOG00000008906	SMG7	99	90.780	ENSOANG00000000994	SMG7	100	91.312	Ornithorhynchus_anatinus
ENSCPOG00000008906	SMG7	100	89.794	ENSOCUG00000005887	SMG7	95	89.966	Oryctolagus_cuniculus
ENSCPOG00000008906	SMG7	99	61.841	ENSORLG00000007314	smg7	70	92.763	Oryzias_latipes
ENSCPOG00000008906	SMG7	99	62.259	ENSORLG00020015779	smg7	70	92.763	Oryzias_latipes_hni
ENSCPOG00000008906	SMG7	99	64.435	ENSORLG00015012289	smg7	99	62.988	Oryzias_latipes_hsok
ENSCPOG00000008906	SMG7	99	62.802	ENSOMEG00000002328	smg7	99	63.184	Oryzias_melastigma
ENSCPOG00000008906	SMG7	96	95.616	ENSOGAG00000003107	SMG7	93	96.347	Otolemur_garnettii
ENSCPOG00000008906	SMG7	100	95.197	ENSOARG00000001352	SMG7	99	95.283	Ovis_aries
ENSCPOG00000008906	SMG7	97	93.712	ENSPPAG00000031619	SMG7	100	93.712	Pan_paniscus
ENSCPOG00000008906	SMG7	100	97.425	ENSPPRG00000011222	SMG7	99	97.425	Panthera_pardus
ENSCPOG00000008906	SMG7	96	96.438	ENSPTIG00000007242	SMG7	100	93.444	Panthera_tigris_altaica
ENSCPOG00000008906	SMG7	96	96.715	ENSPTRG00000001764	SMG7	100	93.712	Pan_troglodytes
ENSCPOG00000008906	SMG7	100	97.770	ENSPANG00000004520	SMG7	99	97.770	Papio_anubis
ENSCPOG00000008906	SMG7	100	63.331	ENSPKIG00000007242	smg7	99	69.802	Paramormyrops_kingsleyae
ENSCPOG00000008906	SMG7	99	89.613	ENSPSIG00000012201	SMG7	99	90.501	Pelodiscus_sinensis
ENSCPOG00000008906	SMG7	54	57.500	ENSPMGG00000021833	smg7	89	58.000	Periophthalmus_magnuspinnatus
ENSCPOG00000008906	SMG7	99	94.952	ENSPEMG00000011315	Smg7	100	94.778	Peromyscus_maniculatus_bairdii
ENSCPOG00000008906	SMG7	99	88.390	ENSPCIG00000003786	SMG7	99	92.424	Phascolarctos_cinereus
ENSCPOG00000008906	SMG7	99	61.755	ENSPFOG00000019219	smg7	99	62.387	Poecilia_formosa
ENSCPOG00000008906	SMG7	99	59.718	ENSPLAG00000001446	smg7	99	60.083	Poecilia_latipinna
ENSCPOG00000008906	SMG7	96	59.107	ENSPMEG00000005218	smg7	99	59.487	Poecilia_mexicana
ENSCPOG00000008906	SMG7	87	59.375	ENSPREG00000019039	smg7	92	60.417	Poecilia_reticulata
ENSCPOG00000008906	SMG7	99	88.380	ENSPPYG00000000427	SMG7	99	89.228	Pongo_abelii
ENSCPOG00000008906	SMG7	95	84.963	ENSPCAG00000008360	SMG7	94	84.779	Procavia_capensis
ENSCPOG00000008906	SMG7	100	97.682	ENSPCOG00000011996	SMG7	99	97.682	Propithecus_coquereli
ENSCPOG00000008906	SMG7	92	90.144	ENSPVAG00000000851	SMG7	89	91.154	Pteropus_vampyrus
ENSCPOG00000008906	SMG7	99	63.734	ENSPNYG00000007643	smg7	99	64.433	Pundamilia_nyererei
ENSCPOG00000008906	SMG7	99	65.886	ENSPNAG00000011374	smg7	98	71.212	Pygocentrus_nattereri
ENSCPOG00000008906	SMG7	100	95.030	ENSRNOG00000027962	Smg7	100	95.116	Rattus_norvegicus
ENSCPOG00000008906	SMG7	100	97.684	ENSRBIG00000036316	SMG7	99	97.684	Rhinopithecus_bieti
ENSCPOG00000008906	SMG7	100	97.684	ENSRROG00000035719	SMG7	99	97.684	Rhinopithecus_roxellana
ENSCPOG00000008906	SMG7	99	96.293	ENSSBOG00000023454	SMG7	99	97.087	Saimiri_boliviensis_boliviensis
ENSCPOG00000008906	SMG7	99	84.237	ENSSHAG00000013147	SMG7	99	84.928	Sarcophilus_harrisii
ENSCPOG00000008906	SMG7	91	75.789	ENSSFOG00015017252	smg7	99	75.789	Scleropages_formosus
ENSCPOG00000008906	SMG7	99	63.583	ENSSMAG00000006067	smg7	99	64.380	Scophthalmus_maximus
ENSCPOG00000008906	SMG7	99	60.487	ENSSDUG00000017543	smg7	99	61.826	Seriola_dumerili
ENSCPOG00000008906	SMG7	99	81.303	ENSSPUG00000002064	SMG7	99	81.933	Sphenodon_punctatus
ENSCPOG00000008906	SMG7	99	62.594	ENSSPAG00000008733	smg7	99	62.845	Stegastes_partitus
ENSCPOG00000008906	SMG7	100	97.084	ENSSSCG00000015558	SMG7	99	97.087	Sus_scrofa
ENSCPOG00000008906	SMG7	99	80.844	ENSTGUG00000003928	SMG7	100	81.772	Taeniopygia_guttata
ENSCPOG00000008906	SMG7	99	62.932	ENSTNIG00000002802	smg7	99	63.331	Tetraodon_nigroviridis
ENSCPOG00000008906	SMG7	77	95.763	ENSTBEG00000003220	SMG7	75	95.763	Tupaia_belangeri
ENSCPOG00000008906	SMG7	96	95.890	ENSTTRG00000014778	SMG7	94	96.804	Tursiops_truncatus
ENSCPOG00000008906	SMG7	97	92.714	ENSUAMG00000017473	SMG7	100	92.714	Ursus_americanus
ENSCPOG00000008906	SMG7	97	97.177	ENSUMAG00000016389	SMG7	100	97.177	Ursus_maritimus
ENSCPOG00000008906	SMG7	100	97.167	ENSVVUG00000008976	SMG7	99	97.173	Vulpes_vulpes
ENSCPOG00000008906	SMG7	99	65.968	ENSXETG00000012528	smg7	99	66.164	Xenopus_tropicalis
ENSCPOG00000008906	SMG7	99	60.050	ENSXMAG00000007123	smg7	99	60.581	Xiphophorus_maculatus