EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000008919 (Gene tree)
Gene ID: 100716302
Gene Symbol: -
Alias: -
Full Name: THUMP domain containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 5818 bases
Position: chrDS562859.1:37782026-37787843
Accession: 100716302
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008012	THUMP	PF02926.17	1.6e-22	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000008999	-	2472	XM_003477798	ENSCPOP00000008012	354 (aa)	XP_003477846	H0VDG2

Gene Model

Click here to download ENSCPOG00000008919's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008919's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000008919	-	100	100.000	ENSCPOG00000023684	-	100	100.000

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008919	-	100	84.225	ENSG00000066654	THUMPD1	96	84.164	Homo_sapiens
ENSCPOG00000008919	-	82	54.915	ENSAPOG00000008440	thumpd1	91	55.593	Acanthochromis_polyacanthus
ENSCPOG00000008919	-	100	84.123	ENSAMEG00000006257	THUMPD1	95	84.928	Ailuropoda_melanoleuca
ENSCPOG00000008919	-	74	59.696	ENSACIG00000024395	thumpd1	78	60.687	Amphilophus_citrinellus
ENSCPOG00000008919	-	87	53.355	ENSAOCG00000003509	thumpd1	96	53.994	Amphiprion_ocellaris
ENSCPOG00000008919	-	82	54.762	ENSAPEG00000010515	thumpd1	91	55.442	Amphiprion_percula
ENSCPOG00000008919	-	85	55.116	ENSATEG00000004737	thumpd1	94	55.960	Anabas_testudineus
ENSCPOG00000008919	-	69	79.435	ENSAPLG00000015259	THUMPD1	87	80.242	Anas_platyrhynchos
ENSCPOG00000008919	-	83	64.169	ENSACAG00000009625	-	94	66.445	Anolis_carolinensis
ENSCPOG00000008919	-	99	67.521	ENSANAG00000027311	-	97	67.941	Aotus_nancymaae
ENSCPOG00000008919	-	100	83.944	ENSANAG00000026882	-	96	83.871	Aotus_nancymaae
ENSCPOG00000008919	-	100	68.732	ENSANAG00000027040	-	95	68.035	Aotus_nancymaae
ENSCPOG00000008919	-	72	58.366	ENSACLG00000004830	thumpd1	79	58.846	Astatotilapia_calliptera
ENSCPOG00000008919	-	90	53.870	ENSAMXG00000012356	thumpd1	94	54.799	Astyanax_mexicanus
ENSCPOG00000008919	-	99	83.240	ENSBTAG00000047673	THUMPD1	96	83.430	Bos_taurus
ENSCPOG00000008919	-	96	83.578	ENSCJAG00000009499	THUMPD1	96	83.578	Callithrix_jacchus
ENSCPOG00000008919	-	100	83.287	ENSCAFG00000017985	THUMPD1	95	83.768	Canis_familiaris
ENSCPOG00000008919	-	100	83.287	ENSCAFG00020021861	THUMPD1	95	83.768	Canis_lupus_dingo
ENSCPOG00000008919	-	99	83.193	ENSCHIG00000010134	THUMPD1	96	83.382	Capra_hircus
ENSCPOG00000008919	-	100	83.708	ENSTSYG00000011537	THUMPD1	96	83.626	Carlito_syrichta
ENSCPOG00000008919	-	100	83.380	ENSCCAG00000030205	THUMPD1	96	83.284	Cebus_capucinus
ENSCPOG00000008919	-	100	77.183	ENSCCAG00000019379	-	82	76.540	Cebus_capucinus
ENSCPOG00000008919	-	100	83.662	ENSCATG00000040309	THUMPD1	96	83.871	Cercocebus_atys
ENSCPOG00000008919	-	99	71.031	ENSCATG00000020844	-	96	70.435	Cercocebus_atys
ENSCPOG00000008919	-	100	89.266	ENSCLAG00000016508	THUMPD1	96	89.118	Chinchilla_lanigera
ENSCPOG00000008919	-	100	67.409	ENSCSAG00000009860	-	77	66.957	Chlorocebus_sabaeus
ENSCPOG00000008919	-	99	83.616	ENSCSAG00000007610	THUMPD1	96	83.824	Chlorocebus_sabaeus
ENSCPOG00000008919	-	100	82.123	ENSCHOG00000005587	THUMPD1	96	82.558	Choloepus_hoffmanni
ENSCPOG00000008919	-	90	70.679	ENSCPBG00000019055	THUMPD1	86	73.397	Chrysemys_picta_bellii
ENSCPOG00000008919	-	75	30.070	ENSCING00000021274	-	95	30.370	Ciona_intestinalis
ENSCPOG00000008919	-	87	72.903	ENSCANG00000035822	-	100	72.903	Colobus_angolensis_palliatus
ENSCPOG00000008919	-	87	75.325	ENSCANG00000038770	THUMPD1	100	75.325	Colobus_angolensis_palliatus
ENSCPOG00000008919	-	100	83.380	ENSCGRG00001014829	Thumpd1	96	83.871	Cricetulus_griseus_chok1gshd
ENSCPOG00000008919	-	100	83.380	ENSCGRG00000000060	Thumpd1	96	83.871	Cricetulus_griseus_crigri
ENSCPOG00000008919	-	79	55.944	ENSCSEG00000002041	thumpd1	91	55.944	Cynoglossus_semilaevis
ENSCPOG00000008919	-	75	61.852	ENSCVAG00000014960	thumpd1	81	62.222	Cyprinodon_variegatus
ENSCPOG00000008919	-	88	49.691	ENSDARG00000100264	thumpd1	93	49.847	Danio_rerio
ENSCPOG00000008919	-	100	83.799	ENSDNOG00000043510	THUMPD1	96	84.012	Dasypus_novemcinctus
ENSCPOG00000008919	-	100	79.722	ENSDORG00000028216	Thumpd1	96	80.870	Dipodomys_ordii
ENSCPOG00000008919	-	83	31.949	FBgn0035532	CG15014	92	33.228	Drosophila_melanogaster
ENSCPOG00000008919	-	96	73.913	ENSETEG00000002763	THUMPD1	81	73.913	Echinops_telfairi
ENSCPOG00000008919	-	72	44.528	ENSEBUG00000011011	THUMPD1	71	44.487	Eptatretus_burgeri
ENSCPOG00000008919	-	55	75.510	ENSEASG00005017428	-	100	75.510	Equus_asinus_asinus
ENSCPOG00000008919	-	100	82.022	ENSECAG00000005354	THUMPD1	96	82.456	Equus_caballus
ENSCPOG00000008919	-	100	80.716	ENSEEUG00000011256	THUMPD1	85	81.948	Erinaceus_europaeus
ENSCPOG00000008919	-	73	60.769	ENSELUG00000013612	thumpd1	60	61.811	Esox_lucius
ENSCPOG00000008919	-	100	84.680	ENSFCAG00000039296	THUMPD1	96	84.928	Felis_catus
ENSCPOG00000008919	-	64	79.039	ENSFALG00000014029	THUMPD1	82	80.349	Ficedula_albicollis
ENSCPOG00000008919	-	72	59.073	ENSFHEG00000013319	thumpd1	96	50.882	Fundulus_heteroclitus
ENSCPOG00000008919	-	86	56.774	ENSGMOG00000003369	thumpd1	96	56.774	Gadus_morhua
ENSCPOG00000008919	-	53	69.149	ENSGALG00000031384	-	78	69.149	Gallus_gallus
ENSCPOG00000008919	-	88	53.165	ENSGAFG00000011000	thumpd1	97	53.797	Gambusia_affinis
ENSCPOG00000008919	-	77	59.636	ENSGACG00000019511	thumpd1	80	61.217	Gasterosteus_aculeatus
ENSCPOG00000008919	-	90	70.062	ENSGAGG00000008225	THUMPD1	94	72.756	Gopherus_agassizii
ENSCPOG00000008919	-	96	59.824	ENSGGOG00000043232	-	95	59.824	Gorilla_gorilla
ENSCPOG00000008919	-	100	84.225	ENSGGOG00000005231	-	77	84.164	Gorilla_gorilla
ENSCPOG00000008919	-	72	57.471	ENSHBUG00000017996	thumpd1	79	58.462	Haplochromis_burtoni
ENSCPOG00000008919	-	60	77.103	ENSHGLG00000000952	-	100	77.103	Heterocephalus_glaber_female
ENSCPOG00000008919	-	100	91.243	ENSHGLG00000011001	-	96	91.471	Heterocephalus_glaber_female
ENSCPOG00000008919	-	60	77.103	ENSHGLG00100010577	-	100	77.103	Heterocephalus_glaber_male
ENSCPOG00000008919	-	100	91.808	ENSHGLG00100016023	THUMPD1	96	92.059	Heterocephalus_glaber_male
ENSCPOG00000008919	-	69	56.379	ENSHCOG00000008618	thumpd1	52	57.642	Hippocampus_comes
ENSCPOG00000008919	-	86	50.625	ENSIPUG00000012500	thumpd1	80	49.563	Ictalurus_punctatus
ENSCPOG00000008919	-	100	87.042	ENSSTOG00000007011	THUMPD1	96	87.390	Ictidomys_tridecemlineatus
ENSCPOG00000008919	-	100	81.690	ENSJJAG00000004295	-	96	82.111	Jaculus_jaculus
ENSCPOG00000008919	-	72	52.874	ENSKMAG00000009545	thumpd1	63	52.471	Kryptolebias_marmoratus
ENSCPOG00000008919	-	71	62.353	ENSLBEG00000009349	thumpd1	77	62.353	Labrus_bergylta
ENSCPOG00000008919	-	73	67.014	ENSLACG00000005833	THUMPD1	78	66.899	Latimeria_chalumnae
ENSCPOG00000008919	-	71	64.479	ENSLOCG00000000854	thumpd1	83	65.251	Lepisosteus_oculatus
ENSCPOG00000008919	-	100	81.616	ENSLAFG00000025838	THUMPD1	96	81.739	Loxodonta_africana
ENSCPOG00000008919	-	87	69.968	ENSMFAG00000041474	-	100	69.968	Macaca_fascicularis
ENSCPOG00000008919	-	100	83.662	ENSMFAG00000036996	THUMPD1	96	83.871	Macaca_fascicularis
ENSCPOG00000008919	-	87	69.649	ENSMMUG00000038414	-	100	69.649	Macaca_mulatta
ENSCPOG00000008919	-	100	83.662	ENSMMUG00000004225	THUMPD1	96	83.871	Macaca_mulatta
ENSCPOG00000008919	-	100	83.662	ENSMNEG00000020726	THUMPD1	96	83.871	Macaca_nemestrina
ENSCPOG00000008919	-	87	69.968	ENSMNEG00000038856	-	100	69.968	Macaca_nemestrina
ENSCPOG00000008919	-	87	69.775	ENSMLEG00000030012	-	99	69.775	Mandrillus_leucophaeus
ENSCPOG00000008919	-	100	83.662	ENSMLEG00000036436	THUMPD1	96	83.871	Mandrillus_leucophaeus
ENSCPOG00000008919	-	80	57.092	ENSMAMG00000006858	thumpd1	95	53.894	Mastacembelus_armatus
ENSCPOG00000008919	-	72	57.471	ENSMZEG00005013693	thumpd1	79	58.462	Maylandia_zebra
ENSCPOG00000008919	-	53	82.353	ENSMGAG00000010340	THUMPD1	91	82.353	Meleagris_gallopavo
ENSCPOG00000008919	-	100	83.051	ENSMAUG00000013306	Thumpd1	96	83.529	Mesocricetus_auratus
ENSCPOG00000008919	-	99	65.527	ENSMICG00000030865	-	91	67.674	Microcebus_murinus
ENSCPOG00000008919	-	100	85.634	ENSMICG00000038483	-	96	85.630	Microcebus_murinus
ENSCPOG00000008919	-	100	83.662	ENSMOCG00000003447	Thumpd1	96	84.164	Microtus_ochrogaster
ENSCPOG00000008919	-	72	60.000	ENSMMOG00000011323	thumpd1	76	60.232	Mola_mola
ENSCPOG00000008919	-	99	73.151	ENSMODG00000024776	-	96	75.783	Monodelphis_domestica
ENSCPOG00000008919	-	99	73.699	ENSMODG00000006971	-	95	75.783	Monodelphis_domestica
ENSCPOG00000008919	-	72	60.547	ENSMALG00000019522	thumpd1	96	55.410	Monopterus_albus
ENSCPOG00000008919	-	100	81.690	MGP_CAROLIEiJ_G0030382	Thumpd1	96	82.698	Mus_caroli
ENSCPOG00000008919	-	100	82.817	ENSMUSG00000030942	Thumpd1	96	83.578	Mus_musculus
ENSCPOG00000008919	-	100	81.232	MGP_PahariEiJ_G0013593	Thumpd1	96	81.633	Mus_pahari
ENSCPOG00000008919	-	90	80.745	ENSMLUG00000010547	THUMPD1	95	77.551	Myotis_lucifugus
ENSCPOG00000008919	-	99	83.616	ENSNGAG00000018643	Thumpd1	96	83.824	Nannospalax_galili
ENSCPOG00000008919	-	83	53.401	ENSNBRG00000006987	thumpd1	83	53.512	Neolamprologus_brichardi
ENSCPOG00000008919	-	100	84.225	ENSNLEG00000012369	THUMPD1	96	84.164	Nomascus_leucogenys
ENSCPOG00000008919	-	84	88.312	ENSOPRG00000011342	THUMPD1	68	92.063	Ochotona_princeps
ENSCPOG00000008919	-	100	88.136	ENSODEG00000012360	THUMPD1	96	88.529	Octodon_degus
ENSCPOG00000008919	-	74	56.877	ENSONIG00000000146	thumpd1	91	57.836	Oreochromis_niloticus
ENSCPOG00000008919	-	99	66.209	ENSOANG00000014297	THUMPD1	96	67.429	Ornithorhynchus_anatinus
ENSCPOG00000008919	-	62	76.471	ENSOCUG00000025354	-	100	76.471	Oryctolagus_cuniculus
ENSCPOG00000008919	-	97	84.104	ENSOCUG00000009895	-	96	84.164	Oryctolagus_cuniculus
ENSCPOG00000008919	-	68	62.397	ENSORLG00000027557	thumpd1	78	62.397	Oryzias_latipes
ENSCPOG00000008919	-	68	62.397	ENSORLG00020010206	thumpd1	78	62.397	Oryzias_latipes_hni
ENSCPOG00000008919	-	68	62.397	ENSORLG00015009581	thumpd1	78	62.397	Oryzias_latipes_hsok
ENSCPOG00000008919	-	73	60.465	ENSOMEG00000019361	thumpd1	76	61.417	Oryzias_melastigma
ENSCPOG00000008919	-	100	82.817	ENSOGAG00000026723	THUMPD1	96	83.284	Otolemur_garnettii
ENSCPOG00000008919	-	99	82.682	ENSOARG00000013107	THUMPD1	96	82.849	Ovis_aries
ENSCPOG00000008919	-	100	83.944	ENSPPAG00000033818	-	77	83.871	Pan_paniscus
ENSCPOG00000008919	-	96	64.809	ENSPPAG00000001653	-	96	69.775	Pan_paniscus
ENSCPOG00000008919	-	100	85.237	ENSPPRG00000014118	-	96	85.507	Panthera_pardus
ENSCPOG00000008919	-	100	84.680	ENSPTIG00000013856	-	96	84.928	Panthera_tigris_altaica
ENSCPOG00000008919	-	100	83.662	ENSPTRG00000007848	THUMPD1	77	83.578	Pan_troglodytes
ENSCPOG00000008919	-	96	63.343	ENSPTRG00000046073	-	95	63.343	Pan_troglodytes
ENSCPOG00000008919	-	100	83.662	ENSPANG00000025507	THUMPD1	96	83.871	Papio_anubis
ENSCPOG00000008919	-	87	68.910	ENSPANG00000034881	-	99	68.910	Papio_anubis
ENSCPOG00000008919	-	81	60.825	ENSPKIG00000014491	thumpd1	89	61.512	Paramormyrops_kingsleyae
ENSCPOG00000008919	-	74	78.626	ENSPSIG00000012430	THUMPD1	82	84.874	Pelodiscus_sinensis
ENSCPOG00000008919	-	72	60.536	ENSPMGG00000014479	thumpd1	89	60.618	Periophthalmus_magnuspinnatus
ENSCPOG00000008919	-	67	63.136	ENSPEMG00000002608	-	100	63.559	Peromyscus_maniculatus_bairdii
ENSCPOG00000008919	-	60	50.935	ENSPMAG00000001389	thumpd1	84	56.180	Petromyzon_marinus
ENSCPOG00000008919	-	99	73.770	ENSPCIG00000029241	THUMPD1	69	75.284	Phascolarctos_cinereus
ENSCPOG00000008919	-	85	54.313	ENSPFOG00000012649	thumpd1	96	54.952	Poecilia_formosa
ENSCPOG00000008919	-	85	54.194	ENSPLAG00000000137	thumpd1	96	54.839	Poecilia_latipinna
ENSCPOG00000008919	-	85	54.487	ENSPMEG00000007750	thumpd1	96	55.128	Poecilia_mexicana
ENSCPOG00000008919	-	76	58.696	ENSPREG00000000144	thumpd1	92	59.420	Poecilia_reticulata
ENSCPOG00000008919	-	78	80.935	ENSPPYG00000007160	-	100	80.935	Pongo_abelii
ENSCPOG00000008919	-	78	78.014	ENSPCAG00000001534	THUMPD1	100	78.014	Procavia_capensis
ENSCPOG00000008919	-	100	85.352	ENSPCOG00000024663	THUMPD1	96	85.924	Propithecus_coquereli
ENSCPOG00000008919	-	62	70.536	ENSPVAG00000003286	-	99	70.536	Pteropus_vampyrus
ENSCPOG00000008919	-	100	77.500	ENSPVAG00000005659	-	96	77.233	Pteropus_vampyrus
ENSCPOG00000008919	-	72	57.471	ENSPNYG00000007061	thumpd1	78	58.462	Pundamilia_nyererei
ENSCPOG00000008919	-	79	59.649	ENSPNAG00000024872	thumpd1	91	60.915	Pygocentrus_nattereri
ENSCPOG00000008919	-	62	79.638	ENSRNOG00000014946	AABR07005588.1	100	79.638	Rattus_norvegicus
ENSCPOG00000008919	-	87	72.258	ENSRBIG00000040136	-	100	72.258	Rhinopithecus_bieti
ENSCPOG00000008919	-	100	83.099	ENSRBIG00000040752	THUMPD1	96	83.578	Rhinopithecus_bieti
ENSCPOG00000008919	-	100	83.380	ENSRROG00000042189	THUMPD1	96	83.578	Rhinopithecus_roxellana
ENSCPOG00000008919	-	87	71.935	ENSRROG00000045699	-	100	71.935	Rhinopithecus_roxellana
ENSCPOG00000008919	-	100	83.662	ENSSBOG00000034246	THUMPD1	96	83.578	Saimiri_boliviensis_boliviensis
ENSCPOG00000008919	-	99	73.626	ENSSHAG00000003853	THUMPD1	96	75.143	Sarcophilus_harrisii
ENSCPOG00000008919	-	72	57.588	ENSSFOG00015007512	thumpd1	76	57.812	Scleropages_formosus
ENSCPOG00000008919	-	86	53.968	ENSSMAG00000000723	thumpd1	95	54.286	Scophthalmus_maximus
ENSCPOG00000008919	-	85	53.503	ENSSDUG00000014502	thumpd1	95	55.238	Seriola_dumerili
ENSCPOG00000008919	-	85	53.822	ENSSLDG00000007694	thumpd1	95	55.556	Seriola_lalandi_dorsalis
ENSCPOG00000008919	-	89	67.164	ENSSPUG00000005096	THUMPD1	100	67.213	Sphenodon_punctatus
ENSCPOG00000008919	-	83	54.849	ENSSPAG00000006993	thumpd1	90	55.705	Stegastes_partitus
ENSCPOG00000008919	-	100	82.500	ENSSSCG00000024748	THUMPD1	96	82.370	Sus_scrofa
ENSCPOG00000008919	-	68	78.367	ENSTGUG00000009247	THUMPD1	89	79.592	Taeniopygia_guttata
ENSCPOG00000008919	-	72	60.700	ENSTRUG00000015656	thumpd1	79	61.719	Takifugu_rubripes
ENSCPOG00000008919	-	72	60.311	ENSTNIG00000001584	thumpd1	84	61.328	Tetraodon_nigroviridis
ENSCPOG00000008919	-	100	85.070	ENSTBEG00000005252	THUMPD1	85	85.337	Tupaia_belangeri
ENSCPOG00000008919	-	100	82.451	ENSTTRG00000016435	THUMPD1	96	82.609	Tursiops_truncatus
ENSCPOG00000008919	-	62	70.667	ENSUAMG00000005779	-	100	70.667	Ursus_americanus
ENSCPOG00000008919	-	100	82.173	ENSVPAG00000003422	THUMPD1	96	82.029	Vicugna_pacos
ENSCPOG00000008919	-	100	83.565	ENSVVUG00000023241	THUMPD1	95	84.058	Vulpes_vulpes
ENSCPOG00000008919	-	75	60.300	ENSXETG00000005539	thumpd1	91	61.509	Xenopus_tropicalis
ENSCPOG00000008919	-	72	60.311	ENSXMAG00000026052	thumpd1	97	53.797	Xiphophorus_maculatus