EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000008943 (Gene tree)
Gene ID: -
Gene Symbol: -
Alias: -
Full Name: -
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 520 bases
Position: chrDS562909.1:4823071-4823590
Accession: -
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000025122	MRP-S32	PF10210.9	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009025	-	369	-	ENSCPOP00000025122	122 (aa)	-	A0A286XI50

Gene Model

Click here to download ENSCPOG00000008943's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000008943's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000008943	-	98	82.609	ENSCPOG00000030015	-	97	82.609

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000008943	-	100	66.901	ENSG00000198015	MRPL42	100	66.901	Homo_sapiens
ENSCPOG00000008943	-	70	68.571	ENSAMEG00000009832	MRPL42	83	68.571	Ailuropoda_melanoleuca
ENSCPOG00000008943	-	62	52.577	ENSACIG00000017826	mrpl42	69	52.577	Amphilophus_citrinellus
ENSCPOG00000008943	-	97	53.237	ENSAPLG00000015057	MRPL42	97	53.237	Anas_platyrhynchos
ENSCPOG00000008943	-	100	64.085	ENSANAG00000036935	-	100	64.085	Aotus_nancymaae
ENSCPOG00000008943	-	100	48.936	ENSANAG00000036083	-	100	48.936	Aotus_nancymaae
ENSCPOG00000008943	-	89	64.062	ENSANAG00000000692	-	91	64.062	Aotus_nancymaae
ENSCPOG00000008943	-	86	66.400	ENSANAG00000033101	-	83	66.400	Aotus_nancymaae
ENSCPOG00000008943	-	70	60.000	ENSBTAG00000052971	-	97	60.000	Bos_taurus
ENSCPOG00000008943	-	100	69.718	ENSBTAG00000002708	MRPL42	100	69.718	Bos_taurus
ENSCPOG00000008943	-	100	66.901	ENSCJAG00000046971	MRPL42	100	66.901	Callithrix_jacchus
ENSCPOG00000008943	-	63	68.041	ENSCAFG00020022967	-	85	68.041	Canis_lupus_dingo
ENSCPOG00000008943	-	89	68.750	ENSCHIG00000014921	MRPL42	100	68.750	Capra_hircus
ENSCPOG00000008943	-	100	69.718	ENSTSYG00000006370	-	100	69.718	Carlito_syrichta
ENSCPOG00000008943	-	69	63.462	ENSTSYG00000032810	-	95	63.462	Carlito_syrichta
ENSCPOG00000008943	-	91	64.122	ENSTSYG00000036466	-	90	64.122	Carlito_syrichta
ENSCPOG00000008943	-	81	79.661	ENSCAPG00000016985	-	89	79.661	Cavia_aperea
ENSCPOG00000008943	-	100	98.361	ENSCAPG00000015105	-	100	98.361	Cavia_aperea
ENSCPOG00000008943	-	89	77.064	ENSCCAG00000029290	-	83	77.064	Cebus_capucinus
ENSCPOG00000008943	-	88	63.780	ENSCCAG00000032203	-	77	63.780	Cebus_capucinus
ENSCPOG00000008943	-	100	66.901	ENSCCAG00000031179	-	100	66.901	Cebus_capucinus
ENSCPOG00000008943	-	100	68.310	ENSCATG00000037616	MRPL42	100	68.310	Cercocebus_atys
ENSCPOG00000008943	-	100	77.305	ENSCLAG00000005421	MRPL42	100	77.305	Chinchilla_lanigera
ENSCPOG00000008943	-	100	67.606	ENSCSAG00000003706	MRPL42	100	67.606	Chlorocebus_sabaeus
ENSCPOG00000008943	-	83	57.851	ENSCPBG00000001581	MRPL42	82	57.851	Chrysemys_picta_bellii
ENSCPOG00000008943	-	100	68.310	ENSCANG00000033457	MRPL42	100	68.310	Colobus_angolensis_palliatus
ENSCPOG00000008943	-	98	52.174	ENSCGRG00001003813	-	98	52.174	Cricetulus_griseus_chok1gshd
ENSCPOG00000008943	-	100	62.500	ENSCGRG00001012694	-	100	62.500	Cricetulus_griseus_chok1gshd
ENSCPOG00000008943	-	98	62.590	ENSCGRG00000003801	Mrpl42	99	62.590	Cricetulus_griseus_crigri
ENSCPOG00000008943	-	89	62.016	ENSDNOG00000049701	-	91	62.016	Dasypus_novemcinctus
ENSCPOG00000008943	-	100	61.268	ENSDNOG00000032710	-	100	61.268	Dasypus_novemcinctus
ENSCPOG00000008943	-	98	68.345	ENSDORG00000015571	Mrpl42	99	68.345	Dipodomys_ordii
ENSCPOG00000008943	-	84	50.000	ENSETEG00000014745	-	92	50.000	Echinops_telfairi
ENSCPOG00000008943	-	100	72.535	ENSEASG00005019361	MRPL42	100	72.535	Equus_asinus_asinus
ENSCPOG00000008943	-	100	71.831	ENSECAG00000026888	MRPL42	100	71.831	Equus_caballus
ENSCPOG00000008943	-	85	70.492	ENSFCAG00000040567	-	100	70.492	Felis_catus
ENSCPOG00000008943	-	100	70.423	ENSFCAG00000037907	-	100	70.423	Felis_catus
ENSCPOG00000008943	-	88	50.394	ENSFCAG00000036356	-	79	50.394	Felis_catus
ENSCPOG00000008943	-	84	56.911	ENSFALG00000010717	MRPL42	84	56.911	Ficedula_albicollis
ENSCPOG00000008943	-	98	72.662	ENSFDAG00000018129	MRPL42	99	72.662	Fukomys_damarensis
ENSCPOG00000008943	-	84	54.472	ENSGALG00000011293	MRPL42	84	54.472	Gallus_gallus
ENSCPOG00000008943	-	97	52.778	ENSGAGG00000010125	MRPL42	98	52.778	Gopherus_agassizii
ENSCPOG00000008943	-	100	66.901	ENSGGOG00000022760	MRPL42	100	66.901	Gorilla_gorilla
ENSCPOG00000008943	-	84	74.590	ENSHGLG00000007399	-	91	75.000	Heterocephalus_glaber_female
ENSCPOG00000008943	-	84	71.545	ENSHGLG00000008248	-	100	71.545	Heterocephalus_glaber_female
ENSCPOG00000008943	-	84	72.131	ENSHGLG00100013257	-	99	72.131	Heterocephalus_glaber_male
ENSCPOG00000008943	-	85	75.000	ENSHGLG00100018317	-	87	75.000	Heterocephalus_glaber_male
ENSCPOG00000008943	-	100	64.789	ENSSTOG00000026544	MRPL42	100	64.789	Ictidomys_tridecemlineatus
ENSCPOG00000008943	-	98	46.809	ENSLACG00000006919	MRPL42	96	46.809	Latimeria_chalumnae
ENSCPOG00000008943	-	81	68.067	ENSLAFG00000013779	MRPL42	85	68.067	Loxodonta_africana
ENSCPOG00000008943	-	100	69.014	ENSMFAG00000032330	MRPL42	100	69.014	Macaca_fascicularis
ENSCPOG00000008943	-	100	66.197	ENSMMUG00000016805	MRPL42	100	66.197	Macaca_mulatta
ENSCPOG00000008943	-	100	68.310	ENSMNEG00000028853	MRPL42	100	68.310	Macaca_nemestrina
ENSCPOG00000008943	-	100	68.310	ENSMLEG00000038104	MRPL42	100	68.310	Mandrillus_leucophaeus
ENSCPOG00000008943	-	84	56.098	ENSMGAG00000011346	MRPL42	84	56.098	Meleagris_gallopavo
ENSCPOG00000008943	-	98	47.101	ENSMAUG00000018130	-	98	47.101	Mesocricetus_auratus
ENSCPOG00000008943	-	98	60.145	ENSMAUG00000010057	-	99	60.145	Mesocricetus_auratus
ENSCPOG00000008943	-	61	61.053	ENSMICG00000045594	-	96	61.053	Microcebus_murinus
ENSCPOG00000008943	-	92	68.939	ENSMICG00000035189	-	92	68.939	Microcebus_murinus
ENSCPOG00000008943	-	62	61.458	ENSMICG00000028094	-	89	61.458	Microcebus_murinus
ENSCPOG00000008943	-	86	67.200	ENSMICG00000036541	-	99	62.264	Microcebus_murinus
ENSCPOG00000008943	-	100	69.718	ENSMICG00000032596	-	100	69.718	Microcebus_murinus
ENSCPOG00000008943	-	98	60.870	ENSMOCG00000004616	-	99	60.870	Microtus_ochrogaster
ENSCPOG00000008943	-	98	64.029	ENSMOCG00000013541	-	99	64.029	Microtus_ochrogaster
ENSCPOG00000008943	-	98	61.429	MGP_CAROLIEiJ_G0015750	Mrpl42	99	61.429	Mus_caroli
ENSCPOG00000008943	-	98	60.714	ENSMUSG00000062981	Mrpl42	99	60.714	Mus_musculus
ENSCPOG00000008943	-	98	67.143	ENSMLUG00000025058	-	99	67.143	Myotis_lucifugus
ENSCPOG00000008943	-	100	66.197	ENSMLUG00000029623	-	100	66.197	Myotis_lucifugus
ENSCPOG00000008943	-	100	64.539	ENSMLUG00000023702	-	100	64.539	Myotis_lucifugus
ENSCPOG00000008943	-	89	66.406	ENSNGAG00000000717	Mrpl42	100	66.406	Nannospalax_galili
ENSCPOG00000008943	-	100	66.901	ENSNLEG00000005699	MRPL42	100	66.901	Nomascus_leucogenys
ENSCPOG00000008943	-	100	60.563	ENSOPRG00000010967	MRPL42	100	60.563	Ochotona_princeps
ENSCPOG00000008943	-	80	75.630	ENSODEG00000008681	-	100	75.630	Octodon_degus
ENSCPOG00000008943	-	100	69.930	ENSODEG00000012689	-	100	72.028	Octodon_degus
ENSCPOG00000008943	-	98	70.149	ENSODEG00000016452	-	98	71.642	Octodon_degus
ENSCPOG00000008943	-	100	64.789	ENSOCUG00000010928	MRPL42	100	64.789	Oryctolagus_cuniculus
ENSCPOG00000008943	-	98	69.065	ENSOGAG00000034004	-	98	69.065	Otolemur_garnettii
ENSCPOG00000008943	-	100	71.127	ENSOGAG00000025600	-	100	71.127	Otolemur_garnettii
ENSCPOG00000008943	-	98	64.029	ENSOGAG00000030438	-	99	64.029	Otolemur_garnettii
ENSCPOG00000008943	-	100	70.423	ENSOGAG00000025686	-	100	70.423	Otolemur_garnettii
ENSCPOG00000008943	-	100	63.380	ENSOGAG00000024156	-	100	63.380	Otolemur_garnettii
ENSCPOG00000008943	-	100	64.789	ENSOGAG00000027617	-	100	64.789	Otolemur_garnettii
ENSCPOG00000008943	-	100	66.901	ENSOGAG00000026395	-	100	66.901	Otolemur_garnettii
ENSCPOG00000008943	-	89	69.531	ENSOARG00000015849	MRPL42	100	69.531	Ovis_aries
ENSCPOG00000008943	-	100	66.197	ENSPPAG00000038254	MRPL42	100	66.197	Pan_paniscus
ENSCPOG00000008943	-	100	69.718	ENSPPRG00000013218	-	100	69.718	Panthera_pardus
ENSCPOG00000008943	-	88	56.637	ENSPPRG00000006533	-	79	56.637	Panthera_pardus
ENSCPOG00000008943	-	85	72.131	ENSPPRG00000017935	-	100	72.131	Panthera_pardus
ENSCPOG00000008943	-	100	71.127	ENSPPRG00000015755	-	100	71.127	Panthera_pardus
ENSCPOG00000008943	-	83	65.574	ENSPTIG00000009717	-	92	70.270	Panthera_tigris_altaica
ENSCPOG00000008943	-	100	69.718	ENSPTIG00000019099	-	100	69.718	Panthera_tigris_altaica
ENSCPOG00000008943	-	100	70.423	ENSPTIG00000009394	-	100	70.423	Panthera_tigris_altaica
ENSCPOG00000008943	-	100	66.197	ENSPTRG00000022791	MRPL42	100	66.197	Pan_troglodytes
ENSCPOG00000008943	-	100	59.864	ENSPANG00000030179	MRPL42	100	59.864	Papio_anubis
ENSCPOG00000008943	-	84	55.738	ENSPSIG00000010745	MRPL42	83	55.738	Pelodiscus_sinensis
ENSCPOG00000008943	-	98	61.871	ENSPEMG00000020562	-	99	61.871	Peromyscus_maniculatus_bairdii
ENSCPOG00000008943	-	100	52.703	ENSPCIG00000001472	-	77	52.703	Phascolarctos_cinereus
ENSCPOG00000008943	-	100	66.197	ENSPPYG00000004833	MRPL42	100	66.197	Pongo_abelii
ENSCPOG00000008943	-	75	67.826	ENSPCAG00000003791	MRPL42	97	67.826	Procavia_capensis
ENSCPOG00000008943	-	88	67.717	ENSPCOG00000014986	-	91	67.717	Propithecus_coquereli
ENSCPOG00000008943	-	100	66.393	ENSPCOG00000018896	-	100	66.393	Propithecus_coquereli
ENSCPOG00000008943	-	100	61.972	ENSPCOG00000025008	-	100	61.972	Propithecus_coquereli
ENSCPOG00000008943	-	51	51.220	ENSPVAG00000013736	-	69	51.220	Pteropus_vampyrus
ENSCPOG00000008943	-	98	61.429	ENSRNOG00000021867	AABR07009508.1	98	61.429	Rattus_norvegicus
ENSCPOG00000008943	-	98	64.029	ENSRNOG00000042740	Mrpl42	99	64.029	Rattus_norvegicus
ENSCPOG00000008943	-	100	66.901	ENSRBIG00000011046	-	100	66.901	Rhinopithecus_bieti
ENSCPOG00000008943	-	89	65.138	ENSRBIG00000044361	-	79	65.138	Rhinopithecus_bieti
ENSCPOG00000008943	-	100	66.901	ENSRROG00000033949	MRPL42	100	66.901	Rhinopithecus_roxellana
ENSCPOG00000008943	-	100	63.380	ENSSBOG00000009656	-	100	63.380	Saimiri_boliviensis_boliviensis
ENSCPOG00000008943	-	61	60.638	ENSSBOG00000027483	-	82	60.638	Saimiri_boliviensis_boliviensis
ENSCPOG00000008943	-	80	62.626	ENSSBOG00000025086	-	100	62.626	Saimiri_boliviensis_boliviensis
ENSCPOG00000008943	-	76	51.282	ENSSFOG00015006975	mrpl42	79	51.282	Scleropages_formosus
ENSCPOG00000008943	-	93	52.239	ENSSPUG00000015009	-	90	52.239	Sphenodon_punctatus
ENSCPOG00000008943	-	62	50.515	ENSSPAG00000013637	mrpl42	74	50.515	Stegastes_partitus
ENSCPOG00000008943	-	99	52.143	ENSSSCG00000036897	-	99	52.143	Sus_scrofa
ENSCPOG00000008943	-	51	69.841	ENSSSCG00000035613	-	57	70.968	Sus_scrofa
ENSCPOG00000008943	-	100	70.423	ENSSSCG00000030478	-	100	70.423	Sus_scrofa
ENSCPOG00000008943	-	65	48.235	ENSSSCG00000034693	-	84	48.235	Sus_scrofa
ENSCPOG00000008943	-	80	55.932	ENSTGUG00000008272	MRPL42	100	55.932	Taeniopygia_guttata
ENSCPOG00000008943	-	56	44.318	ENSTNIG00000018478	mrpl42	67	44.318	Tetraodon_nigroviridis
ENSCPOG00000008943	-	84	69.919	ENSTTRG00000003312	MRPL42	92	69.919	Tursiops_truncatus
ENSCPOG00000008943	-	100	71.831	ENSUAMG00000025405	-	100	71.831	Ursus_americanus
ENSCPOG00000008943	-	85	60.000	ENSUMAG00000014643	-	78	60.000	Ursus_maritimus
ENSCPOG00000008943	-	100	71.831	ENSUMAG00000003107	-	100	71.831	Ursus_maritimus
ENSCPOG00000008943	-	80	66.949	ENSVPAG00000007658	MRPL42	100	66.949	Vicugna_pacos
ENSCPOG00000008943	-	100	69.718	ENSVVUG00000011842	-	100	69.718	Vulpes_vulpes
ENSCPOG00000008943	-	63	44.898	ENSXMAG00000004057	mrpl42	74	44.898	Xiphophorus_maculatus