EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000009144 (Gene tree)
Gene ID: 100716353
Gene Symbol: SYNJ2
Alias: INPP5H
Full Name: synaptojanin 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 115214 bases
Position: chrDS562896.1:11919501-12034714
Accession: 100716353
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030322	Exo_endo_phos	PF03372.23	4.9e-14	1	1
ENSCPOP00000024642	Exo_endo_phos	PF03372.23	9e-14	1	1
ENSCPOP00000008210	Exo_endo_phos	PF03372.23	9.7e-14	1	1
ENSCPOP00000025292	Exo_endo_phos	PF03372.23	1.4e-13	1	1
ENSCPOP00000027213	Exo_endo_phos	PF03372.23	1.4e-13	1	1
ENSCPOP00000030111	Exo_endo_phos	PF03372.23	1.4e-13	1	1
ENSCPOP00000021885	Exo_endo_phos	PF03372.23	1.3e-08	1	1
ENSCPOP00000029810	DUF1866	PF08952.11	3.3e-61	1	1
ENSCPOP00000030322	DUF1866	PF08952.11	1e-60	1	1
ENSCPOP00000024642	DUF1866	PF08952.11	1.7e-60	1	1
ENSCPOP00000008210	DUF1866	PF08952.11	1.8e-60	1	1
ENSCPOP00000025292	DUF1866	PF08952.11	2.4e-60	1	1
ENSCPOP00000027213	DUF1866	PF08952.11	2.4e-60	1	1
ENSCPOP00000030111	DUF1866	PF08952.11	2.5e-60	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009227	SYNJ2-204	3600	-	ENSCPOP00000008210	1199 (aa)	-	H0VDY5
ENSCPOT00000034326	SYNJ2-205	1485	-	ENSCPOP00000021885	494 (aa)	-	A0A286X8Y7
ENSCPOT00000037055	SYNJ2-208	1266	-	ENSCPOP00000029810	386 (aa)	-	A0A286XWI0
ENSCPOT00000040317	SYNJ2-201	7730	XM_003468434	ENSCPOP00000030111	1489 (aa)	XP_003468482	A0A286XX15
ENSCPOT00000037510	SYNJ2-207	2505	-	ENSCPOP00000030322	835 (aa)	-	A0A286XXN3
ENSCPOT00000047020	SYNJ2-206	3381	-	ENSCPOP00000024642	1127 (aa)	-	A0A286XGT6
ENSCPOT00000031222	SYNJ2-202	4416	-	ENSCPOP00000027213	1472 (aa)	-	A0A286XP86
ENSCPOT00000044035	SYNJ2-203	4281	XM_005003132	ENSCPOP00000025292	1427 (aa)	XP_005003189	A0A286XIL6

Gene Model

Click here to download ENSCPOG00000009144's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009144's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000009144	SYNJ2	95	61.229	ENSCPOG00000012182	SYNJ1	85	51.904

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009144	SYNJ2	95	92.766	ENSG00000078269	SYNJ2	99	91.852	Homo_sapiens
ENSCPOG00000009144	SYNJ2	95	91.277	ENSAMEG00000009581	SYNJ2	100	81.818	Ailuropoda_melanoleuca
ENSCPOG00000009144	SYNJ2	95	84.713	ENSAPLG00000002563	SYNJ2	99	70.420	Anas_platyrhynchos
ENSCPOG00000009144	SYNJ2	95	82.553	ENSACAG00000004945	SYNJ2	94	70.507	Anolis_carolinensis
ENSCPOG00000009144	SYNJ2	95	93.404	ENSANAG00000026575	SYNJ2	97	91.419	Aotus_nancymaae
ENSCPOG00000009144	SYNJ2	96	89.121	ENSBTAG00000000817	SYNJ2	100	82.557	Bos_taurus
ENSCPOG00000009144	SYNJ2	95	93.191	ENSCJAG00000003570	SYNJ2	97	91.660	Callithrix_jacchus
ENSCPOG00000009144	SYNJ2	95	92.128	ENSCAFG00000000644	SYNJ2	100	84.736	Canis_familiaris
ENSCPOG00000009144	SYNJ2	95	92.128	ENSCAFG00020015809	SYNJ2	98	87.931	Canis_lupus_dingo
ENSCPOG00000009144	SYNJ2	95	89.362	ENSCHIG00000011077	SYNJ2	100	82.690	Capra_hircus
ENSCPOG00000009144	SYNJ2	95	92.979	ENSTSYG00000014342	SYNJ2	94	91.611	Carlito_syrichta
ENSCPOG00000009144	SYNJ2	100	99.482	ENSCAPG00000000287	SYNJ2	100	99.482	Cavia_aperea
ENSCPOG00000009144	SYNJ2	95	92.553	ENSCCAG00000025484	SYNJ2	97	91.179	Cebus_capucinus
ENSCPOG00000009144	SYNJ2	95	92.979	ENSCATG00000042943	SYNJ2	97	91.266	Cercocebus_atys
ENSCPOG00000009144	SYNJ2	100	97.927	ENSCLAG00000004730	SYNJ2	100	94.106	Chinchilla_lanigera
ENSCPOG00000009144	SYNJ2	95	92.553	ENSCSAG00000013130	SYNJ2	100	86.370	Chlorocebus_sabaeus
ENSCPOG00000009144	SYNJ2	55	97.297	ENSCHOG00000000343	-	52	97.297	Choloepus_hoffmanni
ENSCPOG00000009144	SYNJ2	95	84.713	ENSCPBG00000016273	SYNJ2	98	72.016	Chrysemys_picta_bellii
ENSCPOG00000009144	SYNJ2	95	92.766	ENSCANG00000040349	SYNJ2	97	91.164	Colobus_angolensis_palliatus
ENSCPOG00000009144	SYNJ2	95	94.480	ENSCGRG00001004257	Synj2	97	93.029	Cricetulus_griseus_chok1gshd
ENSCPOG00000009144	SYNJ2	100	90.155	ENSCGRG00000001656	Synj2	100	90.415	Cricetulus_griseus_crigri
ENSCPOG00000009144	SYNJ2	95	85.288	ENSDNOG00000015900	SYNJ2	97	82.939	Dasypus_novemcinctus
ENSCPOG00000009144	SYNJ2	95	92.994	ENSDORG00000014128	Synj2	99	84.314	Dipodomys_ordii
ENSCPOG00000009144	SYNJ2	82	91.304	ENSETEG00000017418	SYNJ2	82	91.304	Echinops_telfairi
ENSCPOG00000009144	SYNJ2	95	92.553	ENSEASG00005018902	SYNJ2	100	86.345	Equus_asinus_asinus
ENSCPOG00000009144	SYNJ2	96	91.202	ENSECAG00000012646	SYNJ2	94	86.412	Equus_caballus
ENSCPOG00000009144	SYNJ2	63	78.571	ENSEEUG00000015796	-	58	78.571	Erinaceus_europaeus
ENSCPOG00000009144	SYNJ2	95	91.489	ENSFCAG00000010854	SYNJ2	97	90.315	Felis_catus
ENSCPOG00000009144	SYNJ2	95	81.953	ENSFALG00000012593	SYNJ2	98	68.707	Ficedula_albicollis
ENSCPOG00000009144	SYNJ2	100	95.855	ENSFDAG00000016352	SYNJ2	100	95.855	Fukomys_damarensis
ENSCPOG00000009144	SYNJ2	95	83.652	ENSGALG00000013727	SYNJ2	98	70.758	Gallus_gallus
ENSCPOG00000009144	SYNJ2	95	84.289	ENSGAGG00000009857	SYNJ2	98	71.552	Gopherus_agassizii
ENSCPOG00000009144	SYNJ2	95	92.766	ENSGGOG00000012210	SYNJ2	97	91.266	Gorilla_gorilla
ENSCPOG00000009144	SYNJ2	100	97.150	ENSHGLG00000007534	SYNJ2	100	93.235	Heterocephalus_glaber_female
ENSCPOG00000009144	SYNJ2	100	97.150	ENSHGLG00100009973	SYNJ2	100	97.150	Heterocephalus_glaber_male
ENSCPOG00000009144	SYNJ2	95	94.904	ENSSTOG00000016474	SYNJ2	99	88.608	Ictidomys_tridecemlineatus
ENSCPOG00000009144	SYNJ2	95	94.692	ENSJJAG00000014436	Synj2	96	89.410	Jaculus_jaculus
ENSCPOG00000009144	SYNJ2	95	74.419	ENSLACG00000007316	SYNJ2	99	69.202	Latimeria_chalumnae
ENSCPOG00000009144	SYNJ2	95	90.013	ENSLAFG00000011979	SYNJ2	100	82.773	Loxodonta_africana
ENSCPOG00000009144	SYNJ2	95	92.979	ENSMFAG00000040552	SYNJ2	100	91.389	Macaca_fascicularis
ENSCPOG00000009144	SYNJ2	95	92.979	ENSMMUG00000007153	SYNJ2	96	91.369	Macaca_mulatta
ENSCPOG00000009144	SYNJ2	95	92.979	ENSMNEG00000017211	SYNJ2	97	91.186	Macaca_nemestrina
ENSCPOG00000009144	SYNJ2	95	92.979	ENSMLEG00000024911	SYNJ2	100	83.311	Mandrillus_leucophaeus
ENSCPOG00000009144	SYNJ2	95	81.186	ENSMGAG00000012839	SYNJ2	99	73.859	Meleagris_gallopavo
ENSCPOG00000009144	SYNJ2	100	90.415	ENSMAUG00000022212	Synj2	100	90.674	Mesocricetus_auratus
ENSCPOG00000009144	SYNJ2	95	90.851	ENSMICG00000015804	SYNJ2	97	89.495	Microcebus_murinus
ENSCPOG00000009144	SYNJ2	100	91.451	ENSMOCG00000020054	Synj2	99	92.509	Microtus_ochrogaster
ENSCPOG00000009144	SYNJ2	95	91.277	ENSMODG00000007783	SYNJ2	100	79.443	Monodelphis_domestica
ENSCPOG00000009144	SYNJ2	100	90.283	MGP_CAROLIEiJ_G0021026	Synj2	100	93.182	Mus_caroli
ENSCPOG00000009144	SYNJ2	100	90.688	ENSMUSG00000023805	Synj2	100	93.485	Mus_musculus
ENSCPOG00000009144	SYNJ2	100	89.637	MGP_PahariEiJ_G0023344	Synj2	100	93.333	Mus_pahari
ENSCPOG00000009144	SYNJ2	100	90.081	MGP_SPRETEiJ_G0021931	Synj2	100	92.879	Mus_spretus
ENSCPOG00000009144	SYNJ2	97	86.975	ENSMPUG00000005323	SYNJ2	98	86.489	Mustela_putorius_furo
ENSCPOG00000009144	SYNJ2	95	90.851	ENSMLUG00000000324	SYNJ2	100	82.560	Myotis_lucifugus
ENSCPOG00000009144	SYNJ2	100	91.969	ENSNGAG00000014859	Synj2	100	91.969	Nannospalax_galili
ENSCPOG00000009144	SYNJ2	95	89.451	ENSNLEG00000010750	SYNJ2	97	87.300	Nomascus_leucogenys
ENSCPOG00000009144	SYNJ2	92	86.406	ENSMEUG00000003493	SYNJ2	95	83.005	Notamacropus_eugenii
ENSCPOG00000009144	SYNJ2	95	88.298	ENSOPRG00000009648	SYNJ2	93	81.637	Ochotona_princeps
ENSCPOG00000009144	SYNJ2	100	95.855	ENSODEG00000007709	SYNJ2	100	95.855	Octodon_degus
ENSCPOG00000009144	SYNJ2	90	65.250	ENSOANG00000029828	-	99	61.053	Ornithorhynchus_anatinus
ENSCPOG00000009144	SYNJ2	95	89.787	ENSOCUG00000004762	SYNJ2	100	83.754	Oryctolagus_cuniculus
ENSCPOG00000009144	SYNJ2	95	91.277	ENSOGAG00000000488	SYNJ2	100	89.369	Otolemur_garnettii
ENSCPOG00000009144	SYNJ2	96	89.121	ENSOARG00000004304	SYNJ2	100	81.781	Ovis_aries
ENSCPOG00000009144	SYNJ2	95	92.979	ENSPPAG00000028831	SYNJ2	99	86.059	Pan_paniscus
ENSCPOG00000009144	SYNJ2	95	91.489	ENSPPRG00000009068	SYNJ2	97	90.234	Panthera_pardus
ENSCPOG00000009144	SYNJ2	95	91.064	ENSPTIG00000018780	SYNJ2	94	90.050	Panthera_tigris_altaica
ENSCPOG00000009144	SYNJ2	95	92.979	ENSPTRG00000018739	SYNJ2	100	91.047	Pan_troglodytes
ENSCPOG00000009144	SYNJ2	95	92.979	ENSPANG00000010755	SYNJ2	97	91.346	Papio_anubis
ENSCPOG00000009144	SYNJ2	95	84.501	ENSPSIG00000014659	SYNJ2	98	70.839	Pelodiscus_sinensis
ENSCPOG00000009144	SYNJ2	99	92.653	ENSPEMG00000006247	Synj2	100	91.451	Peromyscus_maniculatus_bairdii
ENSCPOG00000009144	SYNJ2	95	90.851	ENSPCIG00000010179	SYNJ2	100	80.053	Phascolarctos_cinereus
ENSCPOG00000009144	SYNJ2	95	93.191	ENSPPYG00000017130	SYNJ2	100	86.113	Pongo_abelii
ENSCPOG00000009144	SYNJ2	87	88.710	ENSPCAG00000009217	SYNJ2	86	88.710	Procavia_capensis
ENSCPOG00000009144	SYNJ2	95	92.766	ENSPCOG00000026910	SYNJ2	97	91.740	Propithecus_coquereli
ENSCPOG00000009144	SYNJ2	100	81.916	ENSPVAG00000006131	SYNJ2	100	81.715	Pteropus_vampyrus
ENSCPOG00000009144	SYNJ2	100	89.378	ENSRNOG00000017114	Synj2	97	90.000	Rattus_norvegicus
ENSCPOG00000009144	SYNJ2	95	92.553	ENSRBIG00000044126	SYNJ2	100	84.564	Rhinopithecus_bieti
ENSCPOG00000009144	SYNJ2	95	92.766	ENSRROG00000027755	SYNJ2	97	91.106	Rhinopithecus_roxellana
ENSCPOG00000009144	SYNJ2	95	92.766	ENSSBOG00000034876	SYNJ2	97	91.099	Saimiri_boliviensis_boliviensis
ENSCPOG00000009144	SYNJ2	95	90.426	ENSSHAG00000018881	SYNJ2	100	79.525	Sarcophilus_harrisii
ENSCPOG00000009144	SYNJ2	95	84.468	ENSSPUG00000000491	SYNJ2	96	72.381	Sphenodon_punctatus
ENSCPOG00000009144	SYNJ2	95	92.128	ENSSSCG00000012315	SYNJ2	97	90.638	Sus_scrofa
ENSCPOG00000009144	SYNJ2	95	80.082	ENSTGUG00000011082	SYNJ2	100	73.665	Taeniopygia_guttata
ENSCPOG00000009144	SYNJ2	79	89.655	ENSTBEG00000015827	SYNJ2	85	82.282	Tupaia_belangeri
ENSCPOG00000009144	SYNJ2	93	89.697	ENSTTRG00000009677	SYNJ2	100	80.000	Tursiops_truncatus
ENSCPOG00000009144	SYNJ2	90	78.061	ENSUAMG00000021958	-	98	77.030	Ursus_americanus
ENSCPOG00000009144	SYNJ2	96	85.169	ENSUAMG00000026577	-	88	85.169	Ursus_americanus
ENSCPOG00000009144	SYNJ2	97	88.586	ENSUMAG00000012826	SYNJ2	96	86.897	Ursus_maritimus
ENSCPOG00000009144	SYNJ2	95	87.273	ENSVVUG00000007407	SYNJ2	100	89.250	Vulpes_vulpes
ENSCPOG00000009144	SYNJ2	95	75.847	ENSXETG00000034066	synj2	86	67.857	Xenopus_tropicalis