EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000009217 (Gene tree)
Gene ID: 100723954
Gene Symbol: R3HDM2
Alias: -
Full Name: R3H domain containing 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 191161 bases
Position: chrDS562864.1:40396936-40588096
Accession: 100723954
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008276	R3H	PF01424.22	2.2e-10	1	1
ENSCPOP00000021462	R3H	PF01424.22	2.2e-10	1	1
ENSCPOP00000029754	R3H	PF01424.22	2.2e-10	1	1
ENSCPOP00000028742	R3H	PF01424.22	2.2e-10	1	1
ENSCPOP00000026451	R3H	PF01424.22	2.3e-10	1	1
ENSCPOP00000031389	R3H	PF01424.22	2.4e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009302	R3HDM2-202	3265	-	ENSCPOP00000008276	1036 (aa)	-	H0VE47
ENSCPOT00000043860	R3HDM2-206	3413	XM_013159308	ENSCPOP00000026451	987 (aa)	XP_013014762	A0A286XLQ9
ENSCPOT00000040115	R3HDM2-203	3573	XM_005006391	ENSCPOP00000028742	1039 (aa)	XP_005006448	A0A286XTX4
ENSCPOT00000036657	R3HDM2-205	3473	XM_003476155	ENSCPOP00000029754	1007 (aa)	XP_003476203	A0A286XWU3
ENSCPOT00000034112	R3HDM2-204	3515	XM_003476153	ENSCPOP00000031389	1021 (aa)	XP_003476201	A0A286Y0Q1
ENSCPOT00000038102	R3HDM2-201	3331	-	ENSCPOP00000021462	1036 (aa)	-	H0VE47

Gene Model

Click here to download ENSCPOG00000009217's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009217's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000009217	R3HDM2	64	55.693	ENSCPOG00000008780	ARPP21	88	60.847
ENSCPOG00000009217	R3HDM2	96	54.768	ENSCPOG00000012784	R3HDM1	99	46.840

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009217	R3HDM2	100	94.949	ENSG00000179912	R3HDM2	100	96.552	Homo_sapiens
ENSCPOG00000009217	R3HDM2	99	65.743	ENSAPOG00000020341	r3hdm2	99	66.390	Acanthochromis_polyacanthus
ENSCPOG00000009217	R3HDM2	58	37.807	ENSAPOG00000021873	-	83	37.344	Acanthochromis_polyacanthus
ENSCPOG00000009217	R3HDM2	100	92.161	ENSAMEG00000004812	R3HDM2	100	93.499	Ailuropoda_melanoleuca
ENSCPOG00000009217	R3HDM2	93	65.364	ENSACIG00000016146	r3hdm2	98	65.998	Amphilophus_citrinellus
ENSCPOG00000009217	R3HDM2	99	65.651	ENSAOCG00000023694	r3hdm2	99	66.297	Amphiprion_ocellaris
ENSCPOG00000009217	R3HDM2	58	38.486	ENSAOCG00000003840	-	78	38.448	Amphiprion_ocellaris
ENSCPOG00000009217	R3HDM2	99	65.540	ENSAPEG00000008851	r3hdm2	99	68.240	Amphiprion_percula
ENSCPOG00000009217	R3HDM2	58	38.140	ENSAPEG00000014325	-	76	40.070	Amphiprion_percula
ENSCPOG00000009217	R3HDM2	99	64.327	ENSATEG00000025024	r3hdm2	100	69.287	Anabas_testudineus
ENSCPOG00000009217	R3HDM2	100	81.139	ENSACAG00000006388	R3HDM2	100	81.238	Anolis_carolinensis
ENSCPOG00000009217	R3HDM2	98	90.393	ENSANAG00000031310	-	100	90.393	Aotus_nancymaae
ENSCPOG00000009217	R3HDM2	100	94.641	ENSANAG00000025397	-	100	94.641	Aotus_nancymaae
ENSCPOG00000009217	R3HDM2	99	64.384	ENSACLG00000019106	r3hdm2	99	66.821	Astatotilapia_calliptera
ENSCPOG00000009217	R3HDM2	94	59.815	ENSAMXG00000017180	r3hdm2	99	61.066	Astyanax_mexicanus
ENSCPOG00000009217	R3HDM2	100	94.237	ENSBTAG00000018361	R3HDM2	100	94.237	Bos_taurus
ENSCPOG00000009217	R3HDM2	100	94.332	ENSCJAG00000007365	R3HDM2	100	94.332	Callithrix_jacchus
ENSCPOG00000009217	R3HDM2	100	92.555	ENSCAFG00000000215	R3HDM2	100	93.561	Canis_familiaris
ENSCPOG00000009217	R3HDM2	100	92.533	ENSCAFG00020023713	R3HDM2	100	93.542	Canis_lupus_dingo
ENSCPOG00000009217	R3HDM2	100	93.630	ENSCHIG00000014022	R3HDM2	100	93.630	Capra_hircus
ENSCPOG00000009217	R3HDM2	100	91.790	ENSTSYG00000001449	R3HDM2	100	92.878	Carlito_syrichta
ENSCPOG00000009217	R3HDM2	89	94.400	ENSCCAG00000026083	R3HDM2	100	94.400	Cebus_capucinus
ENSCPOG00000009217	R3HDM2	100	94.545	ENSCATG00000036929	R3HDM2	100	94.545	Cercocebus_atys
ENSCPOG00000009217	R3HDM2	100	96.203	ENSCLAG00000011997	R3HDM2	100	96.203	Chinchilla_lanigera
ENSCPOG00000009217	R3HDM2	100	94.261	ENSCSAG00000004911	R3HDM2	100	94.261	Chlorocebus_sabaeus
ENSCPOG00000009217	R3HDM2	76	88.800	ENSCHOG00000005636	R3HDM2	91	88.800	Choloepus_hoffmanni
ENSCPOG00000009217	R3HDM2	100	78.952	ENSCPBG00000013922	R3HDM2	100	79.439	Chrysemys_picta_bellii
ENSCPOG00000009217	R3HDM2	100	94.737	ENSCANG00000043807	R3HDM2	100	94.737	Colobus_angolensis_palliatus
ENSCPOG00000009217	R3HDM2	100	91.843	ENSCGRG00001017324	R3hdm2	100	91.843	Cricetulus_griseus_chok1gshd
ENSCPOG00000009217	R3HDM2	100	91.237	ENSCGRG00000003862	R3hdm2	100	91.237	Cricetulus_griseus_crigri
ENSCPOG00000009217	R3HDM2	99	65.530	ENSCSEG00000010925	r3hdm2	100	65.682	Cynoglossus_semilaevis
ENSCPOG00000009217	R3HDM2	99	63.824	ENSCVAG00000009058	r3hdm2	99	66.071	Cyprinodon_variegatus
ENSCPOG00000009217	R3HDM2	93	64.392	ENSDARG00000102610	r3hdm2	99	64.550	Danio_rerio
ENSCPOG00000009217	R3HDM2	100	92.836	ENSDNOG00000015033	R3HDM2	100	93.511	Dasypus_novemcinctus
ENSCPOG00000009217	R3HDM2	94	90.861	ENSDORG00000011462	R3hdm2	99	90.861	Dipodomys_ordii
ENSCPOG00000009217	R3HDM2	100	93.851	ENSEASG00005007091	R3HDM2	100	93.851	Equus_asinus_asinus
ENSCPOG00000009217	R3HDM2	100	94.231	ENSECAG00000003157	R3HDM2	100	94.231	Equus_caballus
ENSCPOG00000009217	R3HDM2	96	65.658	ENSELUG00000015969	r3hdm2	100	62.388	Esox_lucius
ENSCPOG00000009217	R3HDM2	100	92.780	ENSFCAG00000000192	R3HDM2	99	93.621	Felis_catus
ENSCPOG00000009217	R3HDM2	90	77.419	ENSFALG00000000255	R3HDM2	100	77.419	Ficedula_albicollis
ENSCPOG00000009217	R3HDM2	100	95.578	ENSFDAG00000019385	R3HDM2	100	95.578	Fukomys_damarensis
ENSCPOG00000009217	R3HDM2	99	62.808	ENSFHEG00000016484	r3hdm2	99	65.587	Fundulus_heteroclitus
ENSCPOG00000009217	R3HDM2	95	66.108	ENSGMOG00000007961	r3hdm2	100	65.616	Gadus_morhua
ENSCPOG00000009217	R3HDM2	100	78.751	ENSGALG00000043736	R3HDM2	100	78.220	Gallus_gallus
ENSCPOG00000009217	R3HDM2	99	65.185	ENSGAFG00000013887	r3hdm2	99	66.019	Gambusia_affinis
ENSCPOG00000009217	R3HDM2	95	68.670	ENSGACG00000006442	r3hdm2	100	69.951	Gasterosteus_aculeatus
ENSCPOG00000009217	R3HDM2	100	78.958	ENSGAGG00000017797	R3HDM2	100	79.470	Gopherus_agassizii
ENSCPOG00000009217	R3HDM2	100	94.747	ENSGGOG00000015007	R3HDM2	100	94.747	Gorilla_gorilla
ENSCPOG00000009217	R3HDM2	100	95.517	ENSHGLG00000010434	-	100	95.517	Heterocephalus_glaber_female
ENSCPOG00000009217	R3HDM2	88	87.900	ENSHGLG00000010421	-	97	87.900	Heterocephalus_glaber_female
ENSCPOG00000009217	R3HDM2	100	95.565	ENSHGLG00100004183	-	100	95.565	Heterocephalus_glaber_male
ENSCPOG00000009217	R3HDM2	96	84.277	ENSHGLG00100018871	-	99	84.277	Heterocephalus_glaber_male
ENSCPOG00000009217	R3HDM2	99	63.931	ENSHCOG00000001142	r3hdm2	92	67.435	Hippocampus_comes
ENSCPOG00000009217	R3HDM2	98	73.966	ENSIPUG00000023873	r3hdm2	99	63.415	Ictalurus_punctatus
ENSCPOG00000009217	R3HDM2	100	89.124	ENSSTOG00000013424	R3HDM2	100	90.332	Ictidomys_tridecemlineatus
ENSCPOG00000009217	R3HDM2	100	93.262	ENSJJAG00000010001	R3hdm2	100	93.359	Jaculus_jaculus
ENSCPOG00000009217	R3HDM2	99	65.310	ENSKMAG00000012695	r3hdm2	99	68.743	Kryptolebias_marmoratus
ENSCPOG00000009217	R3HDM2	99	65.770	ENSLBEG00000013115	r3hdm2	92	68.177	Labrus_bergylta
ENSCPOG00000009217	R3HDM2	95	71.919	ENSLACG00000019064	r3hdm2	100	72.149	Latimeria_chalumnae
ENSCPOG00000009217	R3HDM2	100	70.698	ENSLOCG00000005976	r3hdm2	100	71.485	Lepisosteus_oculatus
ENSCPOG00000009217	R3HDM2	100	91.858	ENSLAFG00000006510	R3HDM2	100	91.858	Loxodonta_africana
ENSCPOG00000009217	R3HDM2	100	94.551	ENSMFAG00000036385	R3HDM2	100	94.551	Macaca_fascicularis
ENSCPOG00000009217	R3HDM2	100	94.551	ENSMMUG00000021789	R3HDM2	100	94.551	Macaca_mulatta
ENSCPOG00000009217	R3HDM2	100	94.456	ENSMNEG00000025314	R3HDM2	100	94.456	Macaca_nemestrina
ENSCPOG00000009217	R3HDM2	100	94.646	ENSMLEG00000028915	R3HDM2	100	94.646	Mandrillus_leucophaeus
ENSCPOG00000009217	R3HDM2	56	36.851	ENSMAMG00000011755	-	84	36.794	Mastacembelus_armatus
ENSCPOG00000009217	R3HDM2	99	64.857	ENSMAMG00000009793	r3hdm2	99	66.175	Mastacembelus_armatus
ENSCPOG00000009217	R3HDM2	99	64.384	ENSMZEG00005007319	r3hdm2	99	66.821	Maylandia_zebra
ENSCPOG00000009217	R3HDM2	100	93.769	ENSMICG00000012389	R3HDM2	100	93.769	Microcebus_murinus
ENSCPOG00000009217	R3HDM2	100	92.195	ENSMOCG00000014425	R3hdm2	100	92.195	Microtus_ochrogaster
ENSCPOG00000009217	R3HDM2	95	66.387	ENSMMOG00000007448	r3hdm2	99	66.877	Mola_mola
ENSCPOG00000009217	R3HDM2	85	76.508	ENSMALG00000010211	r3hdm2	98	63.492	Monopterus_albus
ENSCPOG00000009217	R3HDM2	100	92.697	MGP_CAROLIEiJ_G0015896	R3hdm2	100	92.697	Mus_caroli
ENSCPOG00000009217	R3HDM2	100	92.788	ENSMUSG00000025404	R3hdm2	100	92.788	Mus_musculus
ENSCPOG00000009217	R3HDM2	100	92.082	MGP_PahariEiJ_G0031189	R3hdm2	100	93.060	Mus_pahari
ENSCPOG00000009217	R3HDM2	100	92.412	MGP_SPRETEiJ_G0016722	R3hdm2	100	92.412	Mus_spretus
ENSCPOG00000009217	R3HDM2	98	91.723	ENSMPUG00000001818	R3HDM2	98	91.923	Mustela_putorius_furo
ENSCPOG00000009217	R3HDM2	100	93.186	ENSMLUG00000004980	R3HDM2	100	93.186	Myotis_lucifugus
ENSCPOG00000009217	R3HDM2	100	94.332	ENSNGAG00000018800	R3hdm2	100	94.332	Nannospalax_galili
ENSCPOG00000009217	R3HDM2	94	63.797	ENSNBRG00000004483	r3hdm2	99	66.806	Neolamprologus_brichardi
ENSCPOG00000009217	R3HDM2	100	94.843	ENSNLEG00000017351	R3HDM2	100	94.843	Nomascus_leucogenys
ENSCPOG00000009217	R3HDM2	99	80.211	ENSMEUG00000008588	R3HDM2	100	80.019	Notamacropus_eugenii
ENSCPOG00000009217	R3HDM2	100	82.888	ENSOPRG00000013670	R3HDM2	100	82.888	Ochotona_princeps
ENSCPOG00000009217	R3HDM2	99	65.430	ENSONIG00000005075	r3hdm2	95	70.114	Oreochromis_niloticus
ENSCPOG00000009217	R3HDM2	100	92.653	ENSOCUG00000013258	R3HDM2	100	92.653	Oryctolagus_cuniculus
ENSCPOG00000009217	R3HDM2	99	64.810	ENSORLG00000005502	r3hdm2	95	67.861	Oryzias_latipes
ENSCPOG00000009217	R3HDM2	99	64.531	ENSORLG00020017069	r3hdm2	95	67.570	Oryzias_latipes_hni
ENSCPOG00000009217	R3HDM2	99	64.624	ENSORLG00015012735	r3hdm2	95	67.667	Oryzias_latipes_hsok
ENSCPOG00000009217	R3HDM2	50	36.949	ENSOMEG00000016256	-	77	36.348	Oryzias_melastigma
ENSCPOG00000009217	R3HDM2	50	36.949	ENSOMEG00000009631	-	77	36.348	Oryzias_melastigma
ENSCPOG00000009217	R3HDM2	99	60.277	ENSOMEG00000018079	r3hdm2	93	64.113	Oryzias_melastigma
ENSCPOG00000009217	R3HDM2	100	93.083	ENSOGAG00000012055	R3HDM2	100	93.083	Otolemur_garnettii
ENSCPOG00000009217	R3HDM2	96	81.303	ENSOGAG00000027966	-	99	80.146	Otolemur_garnettii
ENSCPOG00000009217	R3HDM2	100	93.441	ENSOARG00000006929	R3HDM2	100	93.441	Ovis_aries
ENSCPOG00000009217	R3HDM2	100	94.949	ENSPPAG00000034395	R3HDM2	100	94.949	Pan_paniscus
ENSCPOG00000009217	R3HDM2	100	92.836	ENSPPRG00000009240	R3HDM2	100	93.946	Panthera_pardus
ENSCPOG00000009217	R3HDM2	100	92.836	ENSPTIG00000008752	R3HDM2	100	93.946	Panthera_tigris_altaica
ENSCPOG00000009217	R3HDM2	100	94.854	ENSPTRG00000046457	R3HDM2	100	94.854	Pan_troglodytes
ENSCPOG00000009217	R3HDM2	98	93.313	ENSPANG00000024002	R3HDM2	100	93.313	Papio_anubis
ENSCPOG00000009217	R3HDM2	99	66.922	ENSPKIG00000003171	r3hdm2	99	67.179	Paramormyrops_kingsleyae
ENSCPOG00000009217	R3HDM2	63	72.126	ENSPSIG00000006954	R3HDM2	100	72.283	Pelodiscus_sinensis
ENSCPOG00000009217	R3HDM2	93	68.663	ENSPMGG00000007061	r3hdm2	99	69.305	Periophthalmus_magnuspinnatus
ENSCPOG00000009217	R3HDM2	100	92.323	ENSPEMG00000015964	R3hdm2	100	92.323	Peromyscus_maniculatus_bairdii
ENSCPOG00000009217	R3HDM2	100	88.485	ENSPCIG00000023841	R3HDM2	100	87.879	Phascolarctos_cinereus
ENSCPOG00000009217	R3HDM2	94	75.510	ENSPFOG00000006077	r3hdm2	94	78.426	Poecilia_formosa
ENSCPOG00000009217	R3HDM2	99	63.636	ENSPLAG00000002971	r3hdm2	99	65.789	Poecilia_latipinna
ENSCPOG00000009217	R3HDM2	99	63.636	ENSPMEG00000005330	r3hdm2	99	65.789	Poecilia_mexicana
ENSCPOG00000009217	R3HDM2	99	63.871	ENSPREG00000008424	r3hdm2	99	65.989	Poecilia_reticulata
ENSCPOG00000009217	R3HDM2	98	87.980	ENSPPYG00000004685	R3HDM2	81	87.726	Pongo_abelii
ENSCPOG00000009217	R3HDM2	88	92.279	ENSPCAG00000014642	R3HDM2	91	93.939	Procavia_capensis
ENSCPOG00000009217	R3HDM2	100	93.744	ENSPCOG00000013201	R3HDM2	100	93.744	Propithecus_coquereli
ENSCPOG00000009217	R3HDM2	100	94.038	ENSPVAG00000003967	R3HDM2	100	94.038	Pteropus_vampyrus
ENSCPOG00000009217	R3HDM2	94	64.079	ENSPNYG00000013479	r3hdm2	100	66.840	Pundamilia_nyererei
ENSCPOG00000009217	R3HDM2	99	64.007	ENSPNAG00000017473	r3hdm2	99	64.668	Pygocentrus_nattereri
ENSCPOG00000009217	R3HDM2	100	91.675	ENSRNOG00000007801	R3hdm2	100	91.675	Rattus_norvegicus
ENSCPOG00000009217	R3HDM2	100	91.911	ENSRBIG00000037403	R3HDM2	100	91.608	Rhinopithecus_bieti
ENSCPOG00000009217	R3HDM2	100	94.641	ENSRROG00000022271	R3HDM2	100	94.641	Rhinopithecus_roxellana
ENSCPOG00000009217	R3HDM2	100	94.838	ENSSBOG00000023547	R3HDM2	100	94.838	Saimiri_boliviensis_boliviensis
ENSCPOG00000009217	R3HDM2	100	85.468	ENSSHAG00000003511	R3HDM2	99	89.054	Sarcophilus_harrisii
ENSCPOG00000009217	R3HDM2	94	70.064	ENSSFOG00015011219	r3hdm2	99	69.223	Scleropages_formosus
ENSCPOG00000009217	R3HDM2	99	65.949	ENSSMAG00000012073	r3hdm2	100	66.283	Scophthalmus_maximus
ENSCPOG00000009217	R3HDM2	99	65.789	ENSSDUG00000019269	r3hdm2	100	65.586	Seriola_dumerili
ENSCPOG00000009217	R3HDM2	99	65.926	ENSSLDG00000005252	r3hdm2	100	65.828	Seriola_lalandi_dorsalis
ENSCPOG00000009217	R3HDM2	93	87.823	ENSSARG00000003958	R3HDM2	94	87.823	Sorex_araneus
ENSCPOG00000009217	R3HDM2	100	77.366	ENSSPUG00000014132	R3HDM2	100	77.171	Sphenodon_punctatus
ENSCPOG00000009217	R3HDM2	99	65.414	ENSSPAG00000022594	r3hdm2	100	67.163	Stegastes_partitus
ENSCPOG00000009217	R3HDM2	100	94.433	ENSSSCG00000026498	R3HDM2	100	94.604	Sus_scrofa
ENSCPOG00000009217	R3HDM2	73	79.009	ENSTGUG00000015881	R3HDM2	100	77.865	Taeniopygia_guttata
ENSCPOG00000009217	R3HDM2	95	63.326	ENSTRUG00000015075	r3hdm2	99	65.145	Takifugu_rubripes
ENSCPOG00000009217	R3HDM2	88	82.184	ENSTNIG00000007057	r3hdm2	89	79.023	Tetraodon_nigroviridis
ENSCPOG00000009217	R3HDM2	81	96.416	ENSTBEG00000015967	R3HDM2	81	96.416	Tupaia_belangeri
ENSCPOG00000009217	R3HDM2	96	88.362	ENSTTRG00000013082	R3HDM2	93	88.793	Tursiops_truncatus
ENSCPOG00000009217	R3HDM2	100	92.533	ENSUAMG00000020913	R3HDM2	100	93.854	Ursus_americanus
ENSCPOG00000009217	R3HDM2	100	87.513	ENSUMAG00000019179	R3HDM2	100	89.023	Ursus_maritimus
ENSCPOG00000009217	R3HDM2	100	87.428	ENSVPAG00000008656	R3HDM2	100	87.428	Vicugna_pacos
ENSCPOG00000009217	R3HDM2	98	92.640	ENSVVUG00000018014	R3HDM2	97	93.340	Vulpes_vulpes
ENSCPOG00000009217	R3HDM2	100	73.714	ENSXETG00000017153	r3hdm2	100	73.112	Xenopus_tropicalis
ENSCPOG00000009217	R3HDM2	86	62.892	ENSXCOG00000013882	r3hdm2	100	64.390	Xiphophorus_couchianus
ENSCPOG00000009217	R3HDM2	99	64.662	ENSXMAG00000017978	r3hdm2	99	66.081	Xiphophorus_maculatus