EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000009525 (Gene tree)
Gene ID: 100726016
Gene Symbol: -
Alias: -
Full Name: polyadenylate-binding protein 1-like 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 603 bases
Position: chrDS562881.1:24231488-24232090
Accession: 100726016
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000017521	RRM_1	PF00076.22	4.3e-43	1	2
ENSCPOP00000017521	RRM_1	PF00076.22	4.3e-43	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009611	-	603	XM_005004174	ENSCPOP00000017521	200 (aa)	XP_005004231	H0W3H4

Gene Model

Click here to download ENSCPOG00000009525's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009525's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000009525	-	98	77.041	ENSCPOG00000009552	PABPC4	60	77.041
ENSCPOG00000009525	-	98	57.812	ENSCPOG00000002555	PABPC5	93	58.163
ENSCPOG00000009525	-	99	70.051	ENSCPOG00000013633	PABPC1L	59	70.051
ENSCPOG00000009525	-	56	32.759	ENSCPOG00000006074	-	90	30.088
ENSCPOG00000009525	-	97	30.808	ENSCPOG00000008327	TIA1	85	30.808
ENSCPOG00000009525	-	98	75.887	ENSCPOG00000012917	PABPC1	53	75.887
ENSCPOG00000009525	-	98	52.551	ENSCPOG00000033167	PABPC4L	96	52.551
ENSCPOG00000009525	-	85	33.333	ENSCPOG00000011884	ELAVL1	90	33.333

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009525	-	100	99.000	ENSG00000186288	PABPC1L2A	100	99.000	Homo_sapiens
ENSCPOG00000009525	-	100	99.000	ENSG00000184388	PABPC1L2B	100	99.000	Homo_sapiens
ENSCPOG00000009525	-	98	80.102	ENSAPOG00000015105	pabpc1a	58	80.102	Acanthochromis_polyacanthus
ENSCPOG00000009525	-	98	79.592	ENSAPOG00000017776	pabpc1b	61	79.592	Acanthochromis_polyacanthus
ENSCPOG00000009525	-	100	99.500	ENSAMEG00000019441	-	100	99.500	Ailuropoda_melanoleuca
ENSCPOG00000009525	-	98	80.102	ENSACIG00000004685	pabpc1a	58	80.102	Amphilophus_citrinellus
ENSCPOG00000009525	-	98	78.571	ENSACIG00000018366	pabpc1b	60	78.571	Amphilophus_citrinellus
ENSCPOG00000009525	-	98	80.102	ENSAOCG00000011656	pabpc1a	58	80.102	Amphiprion_ocellaris
ENSCPOG00000009525	-	98	79.592	ENSAOCG00000019839	pabpc1b	59	79.592	Amphiprion_ocellaris
ENSCPOG00000009525	-	98	79.592	ENSAPEG00000010435	pabpc1b	59	79.592	Amphiprion_percula
ENSCPOG00000009525	-	98	80.102	ENSAPEG00000006963	pabpc1a	58	80.102	Amphiprion_percula
ENSCPOG00000009525	-	98	80.102	ENSATEG00000024852	pabpc1a	58	80.102	Anabas_testudineus
ENSCPOG00000009525	-	98	79.082	ENSATEG00000012917	pabpc1b	59	79.082	Anabas_testudineus
ENSCPOG00000009525	-	100	99.000	ENSANAG00000019431	-	100	99.000	Aotus_nancymaae
ENSCPOG00000009525	-	100	99.000	ENSANAG00000019429	-	100	99.000	Aotus_nancymaae
ENSCPOG00000009525	-	98	78.061	ENSACLG00000014335	pabpc1b	59	78.061	Astatotilapia_calliptera
ENSCPOG00000009525	-	98	80.102	ENSACLG00000009399	pabpc1a	68	78.889	Astatotilapia_calliptera
ENSCPOG00000009525	-	98	79.592	ENSAMXG00000008599	pabpc1b	59	79.592	Astyanax_mexicanus
ENSCPOG00000009525	-	100	98.500	ENSBTAG00000050902	-	95	98.500	Bos_taurus
ENSCPOG00000009525	-	100	99.000	ENSBTAG00000052491	-	94	99.000	Bos_taurus
ENSCPOG00000009525	-	100	99.000	ENSCJAG00000041326	-	100	99.000	Callithrix_jacchus
ENSCPOG00000009525	-	100	99.500	ENSCAFG00020002052	-	96	99.500	Canis_lupus_dingo
ENSCPOG00000009525	-	100	99.000	ENSCHIG00000006283	-	100	99.000	Capra_hircus
ENSCPOG00000009525	-	100	99.500	ENSCHIG00000011138	-	100	99.500	Capra_hircus
ENSCPOG00000009525	-	100	99.500	ENSTSYG00000001775	-	100	99.500	Carlito_syrichta
ENSCPOG00000009525	-	100	99.000	ENSCCAG00000031524	-	100	99.000	Cebus_capucinus
ENSCPOG00000009525	-	100	99.000	ENSCATG00000042826	-	100	99.000	Cercocebus_atys
ENSCPOG00000009525	-	100	99.000	ENSCATG00000043125	-	100	99.000	Cercocebus_atys
ENSCPOG00000009525	-	100	96.500	ENSCLAG00000017409	-	100	96.500	Chinchilla_lanigera
ENSCPOG00000009525	-	100	96.500	ENSCLAG00000017412	-	100	96.500	Chinchilla_lanigera
ENSCPOG00000009525	-	100	99.000	ENSCSAG00000000102	-	100	99.000	Chlorocebus_sabaeus
ENSCPOG00000009525	-	99	92.965	ENSCGRG00001023387	-	98	92.965	Cricetulus_griseus_chok1gshd
ENSCPOG00000009525	-	98	79.082	ENSCSEG00000015241	-	58	79.082	Cynoglossus_semilaevis
ENSCPOG00000009525	-	98	80.102	ENSCSEG00000013324	pabpc1a	58	80.102	Cynoglossus_semilaevis
ENSCPOG00000009525	-	98	80.102	ENSCVAG00000021872	pabpc1a	58	80.102	Cyprinodon_variegatus
ENSCPOG00000009525	-	98	79.592	ENSCVAG00000005489	pabpc1b	58	79.592	Cyprinodon_variegatus
ENSCPOG00000009525	-	98	79.592	ENSDARG00000017219	pabpc1a	58	79.592	Danio_rerio
ENSCPOG00000009525	-	98	79.082	ENSDARG00000021140	pabpc1b	91	87.603	Danio_rerio
ENSCPOG00000009525	-	100	97.000	ENSDNOG00000030926	-	100	97.000	Dasypus_novemcinctus
ENSCPOG00000009525	-	100	96.500	ENSDORG00000011362	-	100	96.500	Dipodomys_ordii
ENSCPOG00000009525	-	100	99.000	ENSEASG00005010399	-	95	99.000	Equus_asinus_asinus
ENSCPOG00000009525	-	100	99.000	ENSECAG00000002620	-	95	99.000	Equus_caballus
ENSCPOG00000009525	-	100	94.500	ENSEEUG00000008203	-	100	94.500	Erinaceus_europaeus
ENSCPOG00000009525	-	93	55.615	ENSELUG00000005389	-	78	55.615	Esox_lucius
ENSCPOG00000009525	-	98	80.102	ENSELUG00000015062	-	58	80.102	Esox_lucius
ENSCPOG00000009525	-	98	79.592	ENSELUG00000003614	pabpc1a	60	79.592	Esox_lucius
ENSCPOG00000009525	-	100	99.500	ENSFCAG00000039701	-	100	99.500	Felis_catus
ENSCPOG00000009525	-	100	100.000	ENSFDAG00000005484	-	100	100.000	Fukomys_damarensis
ENSCPOG00000009525	-	98	79.082	ENSFHEG00000008186	pabpc1b	58	79.082	Fundulus_heteroclitus
ENSCPOG00000009525	-	98	80.102	ENSFHEG00000018979	pabpc1a	58	80.102	Fundulus_heteroclitus
ENSCPOG00000009525	-	98	79.592	ENSGMOG00000002448	-	59	79.592	Gadus_morhua
ENSCPOG00000009525	-	98	79.592	ENSGMOG00000013448	pabpc1a	58	79.592	Gadus_morhua
ENSCPOG00000009525	-	98	80.102	ENSGAFG00000019750	pabpc1a	61	80.102	Gambusia_affinis
ENSCPOG00000009525	-	98	79.592	ENSGAFG00000010193	pabpc1b	60	79.592	Gambusia_affinis
ENSCPOG00000009525	-	98	80.102	ENSGACG00000003771	pabpc1b	65	80.102	Gasterosteus_aculeatus
ENSCPOG00000009525	-	98	80.102	ENSGACG00000003572	pabpc1a	58	80.102	Gasterosteus_aculeatus
ENSCPOG00000009525	-	100	99.000	ENSGGOG00000043933	-	100	99.000	Gorilla_gorilla
ENSCPOG00000009525	-	100	99.000	ENSGGOG00000038606	-	100	99.000	Gorilla_gorilla
ENSCPOG00000009525	-	98	80.102	ENSHBUG00000020487	pabpc1a	68	78.889	Haplochromis_burtoni
ENSCPOG00000009525	-	98	78.061	ENSHBUG00000002075	pabpc1b	61	78.061	Haplochromis_burtoni
ENSCPOG00000009525	-	100	98.000	ENSHGLG00000019668	-	100	98.000	Heterocephalus_glaber_female
ENSCPOG00000009525	-	100	98.000	ENSHGLG00000019762	-	100	98.000	Heterocephalus_glaber_female
ENSCPOG00000009525	-	100	98.000	ENSHGLG00100020854	-	100	98.000	Heterocephalus_glaber_male
ENSCPOG00000009525	-	98	80.102	ENSHCOG00000013502	pabpc1a	58	80.102	Hippocampus_comes
ENSCPOG00000009525	-	95	68.254	ENSHCOG00000003175	pabpc1b	69	67.000	Hippocampus_comes
ENSCPOG00000009525	-	98	79.592	ENSIPUG00000010791	-	61	79.592	Ictalurus_punctatus
ENSCPOG00000009525	-	98	59.794	ENSIPUG00000021244	-	52	59.184	Ictalurus_punctatus
ENSCPOG00000009525	-	98	79.592	ENSIPUG00000008848	pabpc1a	59	79.592	Ictalurus_punctatus
ENSCPOG00000009525	-	100	98.500	ENSSTOG00000026028	-	100	98.500	Ictidomys_tridecemlineatus
ENSCPOG00000009525	-	100	98.500	ENSSTOG00000022096	-	100	98.500	Ictidomys_tridecemlineatus
ENSCPOG00000009525	-	100	97.500	ENSJJAG00000007037	-	100	97.500	Jaculus_jaculus
ENSCPOG00000009525	-	98	79.082	ENSKMAG00000008049	pabpc1b	63	79.082	Kryptolebias_marmoratus
ENSCPOG00000009525	-	98	80.102	ENSKMAG00000000605	pabpc1a	58	80.102	Kryptolebias_marmoratus
ENSCPOG00000009525	-	98	79.592	ENSLBEG00000026845	pabpc1b	59	79.592	Labrus_bergylta
ENSCPOG00000009525	-	98	80.102	ENSLBEG00000024002	-	58	80.102	Labrus_bergylta
ENSCPOG00000009525	-	99	96.985	ENSLAFG00000023096	-	99	96.985	Loxodonta_africana
ENSCPOG00000009525	-	100	98.507	ENSMFAG00000028878	-	100	98.507	Macaca_fascicularis
ENSCPOG00000009525	-	100	99.000	ENSMMUG00000037681	-	100	99.000	Macaca_mulatta
ENSCPOG00000009525	-	100	99.000	ENSMMUG00000039929	-	100	99.000	Macaca_mulatta
ENSCPOG00000009525	-	100	99.000	ENSMMUG00000009740	-	100	99.000	Macaca_mulatta
ENSCPOG00000009525	-	100	99.000	ENSMNEG00000037732	-	100	99.000	Macaca_nemestrina
ENSCPOG00000009525	-	100	99.000	ENSMLEG00000027495	-	100	99.000	Mandrillus_leucophaeus
ENSCPOG00000009525	-	98	79.082	ENSMAMG00000014610	pabpc1b	60	79.082	Mastacembelus_armatus
ENSCPOG00000009525	-	98	80.102	ENSMAMG00000004502	-	68	78.889	Mastacembelus_armatus
ENSCPOG00000009525	-	98	80.102	ENSMZEG00005025416	pabpc1a	68	78.889	Maylandia_zebra
ENSCPOG00000009525	-	98	78.061	ENSMZEG00005026745	pabpc1b	59	78.061	Maylandia_zebra
ENSCPOG00000009525	-	100	99.000	ENSMICG00000047642	-	100	99.000	Microcebus_murinus
ENSCPOG00000009525	-	98	80.102	ENSMMOG00000018044	pabpc1a	68	78.889	Mola_mola
ENSCPOG00000009525	-	98	79.592	ENSMMOG00000018009	pabpc1b	63	79.592	Mola_mola
ENSCPOG00000009525	-	98	67.179	ENSMODG00000015024	-	57	67.179	Monodelphis_domestica
ENSCPOG00000009525	-	98	73.980	ENSMODG00000013156	-	58	73.980	Monodelphis_domestica
ENSCPOG00000009525	-	98	79.082	ENSMALG00000006066	pabpc1b	64	79.082	Monopterus_albus
ENSCPOG00000009525	-	98	80.102	ENSMALG00000013020	-	62	80.102	Monopterus_albus
ENSCPOG00000009525	-	100	97.000	ENSNGAG00000012688	-	100	97.000	Nannospalax_galili
ENSCPOG00000009525	-	98	80.102	ENSNBRG00000003068	-	68	78.889	Neolamprologus_brichardi
ENSCPOG00000009525	-	98	78.061	ENSNBRG00000013737	pabpc1b	63	78.061	Neolamprologus_brichardi
ENSCPOG00000009525	-	100	99.000	ENSNLEG00000018128	-	100	99.000	Nomascus_leucogenys
ENSCPOG00000009525	-	100	97.500	ENSODEG00000018540	-	100	97.500	Octodon_degus
ENSCPOG00000009525	-	98	80.102	ENSONIG00000006871	-	58	80.102	Oreochromis_niloticus
ENSCPOG00000009525	-	98	78.061	ENSONIG00000002717	pabpc1b	59	78.061	Oreochromis_niloticus
ENSCPOG00000009525	-	100	99.500	ENSOCUG00000002565	-	100	99.500	Oryctolagus_cuniculus
ENSCPOG00000009525	-	98	80.102	ENSORLG00000002691	pabpc1a	68	78.889	Oryzias_latipes
ENSCPOG00000009525	-	98	77.041	ENSORLG00000003008	-	58	77.041	Oryzias_latipes
ENSCPOG00000009525	-	98	80.102	ENSORLG00020022398	pabpc1a	58	80.102	Oryzias_latipes_hni
ENSCPOG00000009525	-	98	77.041	ENSORLG00020022259	-	58	77.041	Oryzias_latipes_hni
ENSCPOG00000009525	-	98	77.041	ENSORLG00015010932	-	58	77.041	Oryzias_latipes_hsok
ENSCPOG00000009525	-	98	80.102	ENSORLG00015013633	pabpc1	58	80.102	Oryzias_latipes_hsok
ENSCPOG00000009525	-	98	76.667	ENSOMEG00000013627	pabpc1b	67	76.667	Oryzias_melastigma
ENSCPOG00000009525	-	98	80.102	ENSOMEG00000020219	pabpc1a	58	80.102	Oryzias_melastigma
ENSCPOG00000009525	-	100	99.000	ENSOGAG00000029513	-	100	99.000	Otolemur_garnettii
ENSCPOG00000009525	-	100	99.000	ENSOGAG00000026047	-	100	99.000	Otolemur_garnettii
ENSCPOG00000009525	-	100	99.000	ENSOARG00000005943	-	100	99.000	Ovis_aries
ENSCPOG00000009525	-	100	99.000	ENSPPAG00000012920	-	100	99.000	Pan_paniscus
ENSCPOG00000009525	-	100	99.500	ENSPPRG00000011809	-	100	99.500	Panthera_pardus
ENSCPOG00000009525	-	100	99.500	ENSPPRG00000011804	-	100	99.500	Panthera_pardus
ENSCPOG00000009525	-	100	99.000	ENSPTRG00000028252	-	100	99.000	Pan_troglodytes
ENSCPOG00000009525	-	100	99.000	ENSPANG00000011549	-	100	99.000	Papio_anubis
ENSCPOG00000009525	-	98	79.592	ENSPKIG00000005676	pabpc1b	59	79.592	Paramormyrops_kingsleyae
ENSCPOG00000009525	-	98	79.082	ENSPMGG00000023134	-	79	79.082	Periophthalmus_magnuspinnatus
ENSCPOG00000009525	-	98	79.082	ENSPMGG00000022487	pabpc1a	76	79.082	Periophthalmus_magnuspinnatus
ENSCPOG00000009525	-	98	79.082	ENSPFOG00000005917	pabpc1b	58	79.082	Poecilia_formosa
ENSCPOG00000009525	-	98	80.102	ENSPFOG00000010815	pabpc1a	57	80.102	Poecilia_formosa
ENSCPOG00000009525	-	98	79.592	ENSPLAG00000001388	pabpc1b	58	79.592	Poecilia_latipinna
ENSCPOG00000009525	-	98	80.102	ENSPLAG00000004114	pabpc1a	58	80.102	Poecilia_latipinna
ENSCPOG00000009525	-	98	80.102	ENSPMEG00000001334	pabpc1a	58	80.102	Poecilia_mexicana
ENSCPOG00000009525	-	98	79.082	ENSPMEG00000014399	pabpc1b	58	79.082	Poecilia_mexicana
ENSCPOG00000009525	-	98	80.102	ENSPREG00000019595	pabpc1a	91	87.603	Poecilia_reticulata
ENSCPOG00000009525	-	98	79.592	ENSPREG00000010911	pabpc1b	60	79.592	Poecilia_reticulata
ENSCPOG00000009525	-	100	99.000	ENSPPYG00000020468	-	100	99.000	Pongo_abelii
ENSCPOG00000009525	-	100	98.500	ENSPCAG00000005308	-	100	98.500	Procavia_capensis
ENSCPOG00000009525	-	100	98.500	ENSPCOG00000026349	-	100	98.500	Propithecus_coquereli
ENSCPOG00000009525	-	100	95.500	ENSPVAG00000016117	-	100	95.500	Pteropus_vampyrus
ENSCPOG00000009525	-	98	80.102	ENSPNYG00000005192	pabpc1a	61	78.889	Pundamilia_nyererei
ENSCPOG00000009525	-	98	78.061	ENSPNYG00000012578	pabpc1b	61	78.061	Pundamilia_nyererei
ENSCPOG00000009525	-	98	78.571	ENSPNAG00000028408	pabpc1a	65	78.571	Pygocentrus_nattereri
ENSCPOG00000009525	-	98	80.102	ENSPNAG00000024626	pabpc1b	58	80.102	Pygocentrus_nattereri
ENSCPOG00000009525	-	100	99.000	ENSRBIG00000027173	-	100	99.000	Rhinopithecus_bieti
ENSCPOG00000009525	-	98	79.082	ENSRBIG00000028738	-	69	79.082	Rhinopithecus_bieti
ENSCPOG00000009525	-	100	99.000	ENSRROG00000017404	-	100	99.000	Rhinopithecus_roxellana
ENSCPOG00000009525	-	98	69.388	ENSSHAG00000000511	-	59	69.388	Sarcophilus_harrisii
ENSCPOG00000009525	-	98	80.102	ENSSFOG00015002752	-	58	80.102	Scleropages_formosus
ENSCPOG00000009525	-	98	80.102	ENSSFOG00015006662	pabpc1a	59	80.102	Scleropages_formosus
ENSCPOG00000009525	-	87	68.966	ENSSFOG00015019668	-	67	68.966	Scleropages_formosus
ENSCPOG00000009525	-	98	80.102	ENSSMAG00000010803	pabpc1a	58	80.102	Scophthalmus_maximus
ENSCPOG00000009525	-	98	79.082	ENSSMAG00000006869	pabpc1b	59	79.082	Scophthalmus_maximus
ENSCPOG00000009525	-	98	80.102	ENSSDUG00000006675	pabpc1a	58	80.102	Seriola_dumerili
ENSCPOG00000009525	-	98	79.592	ENSSDUG00000011965	pabpc1b	59	79.592	Seriola_dumerili
ENSCPOG00000009525	-	98	80.102	ENSSLDG00000011661	pabpc1a	58	80.102	Seriola_lalandi_dorsalis
ENSCPOG00000009525	-	98	79.592	ENSSLDG00000014156	pabpc1b	60	79.592	Seriola_lalandi_dorsalis
ENSCPOG00000009525	-	98	79.592	ENSSPAG00000019265	pabpc1b	65	79.592	Stegastes_partitus
ENSCPOG00000009525	-	98	80.102	ENSSPAG00000014453	-	58	80.102	Stegastes_partitus
ENSCPOG00000009525	-	100	99.500	ENSSSCG00000032167	-	100	99.500	Sus_scrofa
ENSCPOG00000009525	-	100	99.500	ENSSSCG00000036336	-	100	99.500	Sus_scrofa
ENSCPOG00000009525	-	98	80.102	ENSTRUG00000003767	-	59	80.102	Takifugu_rubripes
ENSCPOG00000009525	-	98	80.102	ENSTRUG00000011577	-	58	80.102	Takifugu_rubripes
ENSCPOG00000009525	-	98	75.743	ENSTNIG00000013307	pabpc1a	58	75.743	Tetraodon_nigroviridis
ENSCPOG00000009525	-	98	80.612	ENSTNIG00000009153	pabpc1b	58	80.612	Tetraodon_nigroviridis
ENSCPOG00000009525	-	100	99.500	ENSTTRG00000013181	-	100	99.500	Tursiops_truncatus
ENSCPOG00000009525	-	100	99.500	ENSUAMG00000008089	-	100	99.500	Ursus_americanus
ENSCPOG00000009525	-	98	58.163	ENSUMAG00000023926	-	88	57.653	Ursus_maritimus
ENSCPOG00000009525	-	100	99.500	ENSUMAG00000003364	-	100	99.500	Ursus_maritimus
ENSCPOG00000009525	-	100	99.000	ENSVVUG00000015892	-	97	99.000	Vulpes_vulpes
ENSCPOG00000009525	-	98	79.592	ENSXCOG00000019901	pabpc1b	60	79.592	Xiphophorus_couchianus
ENSCPOG00000009525	-	98	80.102	ENSXCOG00000017066	pabpc1a	61	80.102	Xiphophorus_couchianus
ENSCPOG00000009525	-	98	80.102	ENSXMAG00000002555	pabpc1a	60	80.102	Xiphophorus_maculatus
ENSCPOG00000009525	-	98	79.592	ENSXMAG00000003753	pabpc1b	89	79.592	Xiphophorus_maculatus