EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000009543 (Gene tree)
Gene ID: 100716346
Gene Symbol: YBX2
Alias: CSDA3|Contrin|MSY2
Full Name: Y-box binding protein 2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 5207 bases
Position: chrDS562916.1:9338419-9343625
Accession: 100716346
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000032779	CSD	PF00313.22	4.5e-26	1	1
ENSCPOP00000008565	CSD	PF00313.22	7.1e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000031300	YBX2-202	843	-	ENSCPOP00000032779	280 (aa)	-	A0A286Y4L4
ENSCPOT00000009629	YBX2-201	1080	XM_005002116	ENSCPOP00000008565	359 (aa)	-	H0VEV3

Gene Model

Click here to download ENSCPOG00000009543's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009543's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009543	YBX2	96	88.768	ENSG00000006047	YBX2	99	86.420	Homo_sapiens
ENSCPOG00000009543	YBX2	57	90.000	ENSAMEG00000016564	YBX2	87	91.146	Ailuropoda_melanoleuca
ENSCPOG00000009543	YBX2	96	92.963	ENSANAG00000019540	YBX2	86	92.808	Aotus_nancymaae
ENSCPOG00000009543	YBX2	96	96.667	ENSBTAG00000009126	YBX2	84	96.689	Bos_taurus
ENSCPOG00000009543	YBX2	96	90.741	ENSCJAG00000016581	-	84	91.060	Callithrix_jacchus
ENSCPOG00000009543	YBX2	99	88.530	ENSCJAG00000042146	-	99	88.530	Callithrix_jacchus
ENSCPOG00000009543	YBX2	90	78.175	ENSCAFG00000005162	-	89	78.175	Canis_familiaris
ENSCPOG00000009543	YBX2	96	94.224	ENSCAFG00000016128	-	84	94.822	Canis_familiaris
ENSCPOG00000009543	YBX2	96	90.975	ENSCAFG00020008884	YBX2	84	91.909	Canis_lupus_dingo
ENSCPOG00000009543	YBX2	96	95.926	ENSCHIG00000016407	YBX2	84	96.358	Capra_hircus
ENSCPOG00000009543	YBX2	96	91.176	ENSTSYG00000030765	YBX2	92	90.511	Carlito_syrichta
ENSCPOG00000009543	YBX2	95	100.000	ENSCAPG00000011432	YBX2	100	100.000	Cavia_aperea
ENSCPOG00000009543	YBX2	96	94.074	ENSCCAG00000025671	YBX2	83	94.702	Cebus_capucinus
ENSCPOG00000009543	YBX2	96	92.963	ENSCATG00000036919	YBX2	84	93.377	Cercocebus_atys
ENSCPOG00000009543	YBX2	100	98.221	ENSCLAG00000010306	YBX2	99	98.221	Chinchilla_lanigera
ENSCPOG00000009543	YBX2	96	92.963	ENSCSAG00000011857	YBX2	84	93.377	Chlorocebus_sabaeus
ENSCPOG00000009543	YBX2	91	69.112	ENSCPBG00000022288	YBX2	82	67.416	Chrysemys_picta_bellii
ENSCPOG00000009543	YBX2	100	90.357	ENSCANG00000007129	YBX2	99	90.357	Colobus_angolensis_palliatus
ENSCPOG00000009543	YBX2	100	94.662	ENSCGRG00001000751	Ybx2	99	94.662	Cricetulus_griseus_chok1gshd
ENSCPOG00000009543	YBX2	96	95.556	ENSCGRG00000007683	Ybx2	99	95.556	Cricetulus_griseus_crigri
ENSCPOG00000009543	YBX2	96	94.776	ENSDNOG00000013746	YBX2	97	83.667	Dasypus_novemcinctus
ENSCPOG00000009543	YBX2	100	95.730	ENSDORG00000010882	Ybx2	99	95.730	Dipodomys_ordii
ENSCPOG00000009543	YBX2	94	91.221	ENSEASG00005018928	YBX2	83	91.837	Equus_asinus_asinus
ENSCPOG00000009543	YBX2	96	89.668	ENSECAG00000009996	YBX2	79	90.429	Equus_caballus
ENSCPOG00000009543	YBX2	96	96.296	ENSFCAG00000018097	YBX2	85	95.695	Felis_catus
ENSCPOG00000009543	YBX2	91	69.380	ENSGAGG00000016159	YBX2	89	74.419	Gopherus_agassizii
ENSCPOG00000009543	YBX2	96	90.370	ENSGGOG00000007399	YBX2	84	91.391	Gorilla_gorilla
ENSCPOG00000009543	YBX2	96	95.185	ENSHGLG00000014186	YBX2	84	95.364	Heterocephalus_glaber_female
ENSCPOG00000009543	YBX2	98	95.985	ENSSTOG00000008630	YBX2	100	95.985	Ictidomys_tridecemlineatus
ENSCPOG00000009543	YBX2	96	96.667	ENSJJAG00000013072	Ybx2	96	96.667	Jaculus_jaculus
ENSCPOG00000009543	YBX2	100	95.833	ENSLAFG00000014006	YBX2	100	95.833	Loxodonta_africana
ENSCPOG00000009543	YBX2	96	92.963	ENSMFAG00000039921	YBX2	84	93.377	Macaca_fascicularis
ENSCPOG00000009543	YBX2	96	92.963	ENSMNEG00000045221	YBX2	84	93.377	Macaca_nemestrina
ENSCPOG00000009543	YBX2	100	91.429	ENSMLEG00000039452	YBX2	99	91.429	Mandrillus_leucophaeus
ENSCPOG00000009543	YBX2	98	71.168	ENSMLEG00000029266	-	84	72.662	Mandrillus_leucophaeus
ENSCPOG00000009543	YBX2	96	95.556	ENSMAUG00000022062	Ybx2	84	96.026	Mesocricetus_auratus
ENSCPOG00000009543	YBX2	96	95.556	ENSMICG00000012453	YBX2	98	95.556	Microcebus_murinus
ENSCPOG00000009543	YBX2	99	95.341	ENSMOCG00000013958	Ybx2	99	95.341	Microtus_ochrogaster
ENSCPOG00000009543	YBX2	91	91.732	ENSMODG00000017596	YBX2	81	87.248	Monodelphis_domestica
ENSCPOG00000009543	YBX2	99	95.357	MGP_CAROLIEiJ_G0016606	Ybx2	99	95.357	Mus_caroli
ENSCPOG00000009543	YBX2	99	95.357	ENSMUSG00000018554	Ybx2	99	95.357	Mus_musculus
ENSCPOG00000009543	YBX2	99	95.357	MGP_PahariEiJ_G0017737	Ybx2	99	95.357	Mus_pahari
ENSCPOG00000009543	YBX2	99	95.357	MGP_SPRETEiJ_G0017442	Ybx2	99	95.357	Mus_spretus
ENSCPOG00000009543	YBX2	88	92.276	ENSMPUG00000010386	YBX2	93	92.276	Mustela_putorius_furo
ENSCPOG00000009543	YBX2	96	89.630	ENSMLUG00000004686	YBX2	90	89.404	Myotis_lucifugus
ENSCPOG00000009543	YBX2	96	94.074	ENSNGAG00000011707	Ybx2	85	94.371	Nannospalax_galili
ENSCPOG00000009543	YBX2	96	91.852	ENSNLEG00000008063	-	100	92.333	Nomascus_leucogenys
ENSCPOG00000009543	YBX2	96	87.037	ENSMEUG00000006947	YBX2	90	86.093	Notamacropus_eugenii
ENSCPOG00000009543	YBX2	96	89.259	ENSOPRG00000013773	YBX2	100	90.000	Ochotona_princeps
ENSCPOG00000009543	YBX2	100	97.153	ENSODEG00000017530	YBX2	100	96.944	Octodon_degus
ENSCPOG00000009543	YBX2	90	94.466	ENSOCUG00000015064	YBX2	95	86.242	Oryctolagus_cuniculus
ENSCPOG00000009543	YBX2	96	97.015	ENSOGAG00000004392	YBX2	100	97.015	Otolemur_garnettii
ENSCPOG00000009543	YBX2	96	96.296	ENSOARG00000011562	YBX2	78	94.946	Ovis_aries
ENSCPOG00000009543	YBX2	96	88.768	ENSPPAG00000041892	YBX2	100	89.701	Pan_paniscus
ENSCPOG00000009543	YBX2	96	95.203	ENSPPRG00000000782	YBX2	85	96.370	Panthera_pardus
ENSCPOG00000009543	YBX2	96	88.768	ENSPTRG00000008673	YBX2	84	89.935	Pan_troglodytes
ENSCPOG00000009543	YBX2	95	90.226	ENSPTRG00000051288	-	85	90.226	Pan_troglodytes
ENSCPOG00000009543	YBX2	96	92.593	ENSPANG00000024250	YBX2	84	93.311	Papio_anubis
ENSCPOG00000009543	YBX2	98	68.978	ENSPANG00000032747	-	74	65.894	Papio_anubis
ENSCPOG00000009543	YBX2	95	70.290	ENSPSIG00000012364	YBX2	99	73.913	Pelodiscus_sinensis
ENSCPOG00000009543	YBX2	88	88.571	ENSPCIG00000028819	YBX2	98	80.287	Phascolarctos_cinereus
ENSCPOG00000009543	YBX2	96	94.444	ENSPCAG00000008019	YBX2	84	94.702	Procavia_capensis
ENSCPOG00000009543	YBX2	96	94.074	ENSPCOG00000006030	YBX2	84	94.371	Propithecus_coquereli
ENSCPOG00000009543	YBX2	100	85.873	ENSPVAG00000005050	YBX2	100	85.873	Pteropus_vampyrus
ENSCPOG00000009543	YBX2	96	95.926	ENSRNOG00000017117	Ybx2	84	96.026	Rattus_norvegicus
ENSCPOG00000009543	YBX2	96	92.593	ENSRBIG00000040919	YBX2	85	93.046	Rhinopithecus_bieti
ENSCPOG00000009543	YBX2	96	86.861	ENSRROG00000041728	YBX2	99	82.143	Rhinopithecus_roxellana
ENSCPOG00000009543	YBX2	100	92.500	ENSSBOG00000029566	YBX2	99	92.500	Saimiri_boliviensis_boliviensis
ENSCPOG00000009543	YBX2	90	90.119	ENSSHAG00000007786	YBX2	95	85.000	Sarcophilus_harrisii
ENSCPOG00000009543	YBX2	96	95.556	ENSSARG00000000488	YBX2	84	96.026	Sorex_araneus
ENSCPOG00000009543	YBX2	95	67.528	ENSSPUG00000018250	YBX2	99	68.013	Sphenodon_punctatus
ENSCPOG00000009543	YBX2	100	95.833	ENSSSCG00000017938	YBX2	100	95.833	Sus_scrofa
ENSCPOG00000009543	YBX2	96	92.222	ENSTBEG00000001266	YBX2	89	93.000	Tupaia_belangeri
ENSCPOG00000009543	YBX2	60	98.462	ENSTTRG00000009780	YBX2	56	98.969	Tursiops_truncatus
ENSCPOG00000009543	YBX2	93	90.226	ENSUAMG00000014725	YBX2	100	90.226	Ursus_americanus
ENSCPOG00000009543	YBX2	88	89.683	ENSUMAG00000015222	YBX2	90	89.683	Ursus_maritimus
ENSCPOG00000009543	YBX2	88	77.642	ENSVPAG00000003104	-	100	77.642	Vicugna_pacos
ENSCPOG00000009543	YBX2	93	89.925	ENSVVUG00000027830	-	100	89.925	Vulpes_vulpes
ENSCPOG00000009543	YBX2	97	80.586	ENSVVUG00000012111	-	77	84.921	Vulpes_vulpes