EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000009552 (Gene tree)
Gene ID
100717325
Gene Symbol
PABPC4
Alias
APP-1|iPABP
Full Name
poly(A) binding protein cytoplasmic 4
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
17510 bases
Position
chrDS562998.1:1573952-1591461
Accession
100717325
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000008574PABPPF00658.181.4e-3111
ENSCPOP00000031701PABPPF00658.181.5e-3111
ENSCPOP00000024709PABPPF00658.181.6e-3111
ENSCPOP00000008574RRM_5PF13893.63.9e-0911
ENSCPOP00000031701RRM_5PF13893.64.7e-0911
ENSCPOP00000024709RRM_5PF13893.66e-0911
ENSCPOP00000008574RRM_1PF00076.222.5e-9214
ENSCPOP00000008574RRM_1PF00076.222.5e-9224
ENSCPOP00000008574RRM_1PF00076.222.5e-9234
ENSCPOP00000008574RRM_1PF00076.222.5e-9244
ENSCPOP00000031701RRM_1PF00076.222.9e-9214
ENSCPOP00000031701RRM_1PF00076.222.9e-9224
ENSCPOP00000031701RRM_1PF00076.222.9e-9234
ENSCPOP00000031701RRM_1PF00076.222.9e-9244
ENSCPOP00000024709RRM_1PF00076.223.7e-9214
ENSCPOP00000024709RRM_1PF00076.223.7e-9224
ENSCPOP00000024709RRM_1PF00076.223.7e-9234
ENSCPOP00000024709RRM_1PF00076.223.7e-9244
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000039469PABPC4-2013258XM_003462264ENSCPOP00000024709660 (aa)XP_003462312A0A286XH20
ENSCPOT00000009638PABPC4-2031839-ENSCPOP00000008574612 (aa)-H0VEW1
ENSCPOT00000038372PABPC4-2023171XM_003462266ENSCPOP00000031701631 (aa)XP_003462314A0A286Y1J6
Gene Model
Click here to download ENSCPOG00000009552's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009552's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000009552PABPC45631.646ENSCPOG00000026092HNRNPA05132.450
ENSCPOG00000009552PABPC45930.189ENSCPOG00000008327TIA18530.189
ENSCPOG00000009552PABPC49877.123ENSCPOG00000012917PABPC19777.257
ENSCPOG00000009552PABPC46077.041ENSCPOG00000009525-9877.041
ENSCPOG00000009552PABPC46037.500ENSCPOG00000012567CELF26137.500
ENSCPOG00000009552PABPC46134.940ENSCPOG00000010472ELAVL28634.940
ENSCPOG00000009552PABPC49864.434ENSCPOG00000013633PABPC1L9964.205
ENSCPOG00000009552PABPC45830.282ENSCPOG00000022816-8830.282
ENSCPOG00000009552PABPC45238.889ENSCPOG00000036381CELF17038.889
ENSCPOG00000009552PABPC46130.952ENSCPOG00000002044-9030.625
ENSCPOG00000009552PABPC46034.234ENSCPOG00000011884ELAVL19034.234
ENSCPOG00000009552PABPC46165.449ENSCPOG00000002555PABPC59565.289
ENSCPOG00000009552PABPC46165.583ENSCPOG00000033167PABPC4L9965.583
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000009552PABPC410099.394ENSG00000090621PABPC4100100.000Homo_sapiens
ENSCPOG00000009552PABPC49983.360ENSAPOG00000001161pabpc410082.764Acanthochromis_polyacanthus
ENSCPOG00000009552PABPC49857.395ENSAMEG00000015083-9957.074Ailuropoda_melanoleuca
ENSCPOG00000009552PABPC410098.636ENSAMEG00000011535-10098.636Ailuropoda_melanoleuca
ENSCPOG00000009552PABPC410083.594ENSACIG00000023343pabpc410082.615Amphilophus_citrinellus
ENSCPOG00000009552PABPC49983.518ENSAOCG00000021529pabpc410082.791Amphiprion_ocellaris
ENSCPOG00000009552PABPC49983.518ENSAPEG00000019196pabpc410082.791Amphiprion_percula
ENSCPOG00000009552PABPC49982.911ENSATEG00000007402pabpc410082.171Anabas_testudineus
ENSCPOG00000009552PABPC49991.429ENSAPLG00000009729-10091.429Anas_platyrhynchos
ENSCPOG00000009552PABPC49990.519ENSACAG00000002544PABPC410090.519Anolis_carolinensis
ENSCPOG00000009552PABPC410099.545ENSANAG00000025079PABPC410099.545Aotus_nancymaae
ENSCPOG00000009552PABPC410083.125ENSACLG00000019558pabpc410083.101Astatotilapia_calliptera
ENSCPOG00000009552PABPC49979.081ENSAMXG00000018779pabpc49979.715Astyanax_mexicanus
ENSCPOG00000009552PABPC45986.826ENSBTAG00000048536-9386.826Bos_taurus
ENSCPOG00000009552PABPC410096.672ENSBTAG00000017125PABPC410096.672Bos_taurus
ENSCPOG00000009552PABPC410099.091ENSCJAG00000002512-10099.091Callithrix_jacchus
ENSCPOG00000009552PABPC47295.385ENSCJAG00000045953-9289.300Callithrix_jacchus
ENSCPOG00000009552PABPC410098.891ENSCAFG00000003081PABPC410098.891Canis_familiaris
ENSCPOG00000009552PABPC410098.788ENSCAFG00020004161PABPC410098.788Canis_lupus_dingo
ENSCPOG00000009552PABPC410099.091ENSCHIG00000019398-10099.091Capra_hircus
ENSCPOG00000009552PABPC410076.667ENSCHIG00000023385-10076.667Capra_hircus
ENSCPOG00000009552PABPC410099.091ENSTSYG00000006532PABPC410099.091Carlito_syrichta
ENSCPOG00000009552PABPC49999.696ENSCAPG00000015984PABPC410099.696Cavia_aperea
ENSCPOG00000009552PABPC410099.242ENSCCAG00000037306PABPC410099.242Cebus_capucinus
ENSCPOG00000009552PABPC410099.545ENSCATG00000042164PABPC410099.545Cercocebus_atys
ENSCPOG00000009552PABPC410099.091ENSCLAG00000011899PABPC410099.091Chinchilla_lanigera
ENSCPOG00000009552PABPC410099.545ENSCSAG00000001135PABPC410099.545Chlorocebus_sabaeus
ENSCPOG00000009552PABPC48997.098ENSCHOG00000005327PABPC48197.098Choloepus_hoffmanni
ENSCPOG00000009552PABPC49991.746ENSCPBG00000001038PABPC410091.746Chrysemys_picta_bellii
ENSCPOG00000009552PABPC49999.386ENSCANG00000034177PABPC410099.386Colobus_angolensis_palliatus
ENSCPOG00000009552PABPC410097.590ENSCGRG00001018166Pabpc410097.590Cricetulus_griseus_chok1gshd
ENSCPOG00000009552PABPC49995.115ENSCGRG00000009777Pabpc410095.115Cricetulus_griseus_crigri
ENSCPOG00000009552PABPC410082.500ENSCSEG00000000130pabpc410082.171Cynoglossus_semilaevis
ENSCPOG00000009552PABPC49983.625ENSCVAG00000019246pabpc410083.754Cyprinodon_variegatus
ENSCPOG00000009552PABPC49985.238ENSDARG00000059259pabpc410086.020Danio_rerio
ENSCPOG00000009552PABPC49999.107ENSDNOG00000018444-10099.107Dasypus_novemcinctus
ENSCPOG00000009552PABPC410097.273ENSDORG00000011581Pabpc410097.273Dipodomys_ordii
ENSCPOG00000009552PABPC48665.185ENSETEG00000009172-9965.201Echinops_telfairi
ENSCPOG00000009552PABPC4100100.000ENSETEG00000018453-84100.000Echinops_telfairi
ENSCPOG00000009552PABPC49976.582ENSEBUG00000000992pabpc49980.562Eptatretus_burgeri
ENSCPOG00000009552PABPC49776.898ENSEBUG00000013782pabpc49975.949Eptatretus_burgeri
ENSCPOG00000009552PABPC410099.242ENSEASG00005014119PABPC410099.242Equus_asinus_asinus
ENSCPOG00000009552PABPC410099.242ENSECAG00000009396PABPC410099.242Equus_caballus
ENSCPOG00000009552PABPC410096.061ENSEEUG00000002962PABPC410096.061Erinaceus_europaeus
ENSCPOG00000009552PABPC49983.599ENSELUG00000003195pabpc49884.177Esox_lucius
ENSCPOG00000009552PABPC410098.939ENSFCAG00000015254-10098.939Felis_catus
ENSCPOG00000009552PABPC49990.952ENSFALG00000000543PABPC410090.952Ficedula_albicollis
ENSCPOG00000009552PABPC410099.394ENSFDAG00000020016-10099.394Fukomys_damarensis
ENSCPOG00000009552PABPC49067.490ENSFDAG00000010581-10063.361Fukomys_damarensis
ENSCPOG00000009552PABPC410083.412ENSFHEG00000007548pabpc49688.793Fundulus_heteroclitus
ENSCPOG00000009552PABPC49982.965ENSGMOG00000019025pabpc49983.123Gadus_morhua
ENSCPOG00000009552PABPC49991.746ENSGALG00000003800PABPC410091.746Gallus_gallus
ENSCPOG00000009552PABPC49990.802ENSGAFG00000018195pabpc49895.556Gambusia_affinis
ENSCPOG00000009552PABPC410081.719ENSGACG00000007179pabpc410082.243Gasterosteus_aculeatus
ENSCPOG00000009552PABPC49991.587ENSGAGG00000001888PABPC410091.587Gopherus_agassizii
ENSCPOG00000009552PABPC410099.394ENSGGOG00000004002PABPC410099.394Gorilla_gorilla
ENSCPOG00000009552PABPC410083.281ENSHBUG00000020206pabpc410083.256Haplochromis_burtoni
ENSCPOG00000009552PABPC410099.545ENSHGLG00000011162PABPC410099.545Heterocephalus_glaber_female
ENSCPOG00000009552PABPC410099.525ENSHGLG00100001580PABPC410099.525Heterocephalus_glaber_male
ENSCPOG00000009552PABPC410082.316ENSHCOG00000012694pabpc410082.143Hippocampus_comes
ENSCPOG00000009552PABPC49883.173ENSIPUG00000016620pabpc49981.106Ictalurus_punctatus
ENSCPOG00000009552PABPC410096.970ENSSTOG00000010416PABPC410096.970Ictidomys_tridecemlineatus
ENSCPOG00000009552PABPC410094.394ENSJJAG00000007781Pabpc410094.394Jaculus_jaculus
ENSCPOG00000009552PABPC49991.304ENSKMAG00000013597pabpc49983.172Kryptolebias_marmoratus
ENSCPOG00000009552PABPC410082.426ENSLBEG00000013654pabpc410081.776Labrus_bergylta
ENSCPOG00000009552PABPC49988.170ENSLACG00000011907PABPC410088.170Latimeria_chalumnae
ENSCPOG00000009552PABPC49985.512ENSLOCG00000001877pabpc49986.299Lepisosteus_oculatus
ENSCPOG00000009552PABPC410098.788ENSLAFG00000000151PABPC410098.788Loxodonta_africana
ENSCPOG00000009552PABPC410099.545ENSMFAG00000041481PABPC410099.545Macaca_fascicularis
ENSCPOG00000009552PABPC410099.545ENSMMUG00000007497PABPC410099.545Macaca_mulatta
ENSCPOG00000009552PABPC410099.394ENSMNEG00000043054PABPC410099.394Macaca_nemestrina
ENSCPOG00000009552PABPC410099.545ENSMLEG00000040716PABPC410099.545Mandrillus_leucophaeus
ENSCPOG00000009552PABPC49983.201ENSMAMG00000010025pabpc49982.371Mastacembelus_armatus
ENSCPOG00000009552PABPC410082.969ENSMZEG00005006141pabpc410082.946Maylandia_zebra
ENSCPOG00000009552PABPC49987.905ENSMGAG00000005408PABPC410087.905Meleagris_gallopavo
ENSCPOG00000009552PABPC410080.368ENSMAUG00000019763-10080.368Mesocricetus_auratus
ENSCPOG00000009552PABPC45981.287ENSMAUG00000004089-9281.287Mesocricetus_auratus
ENSCPOG00000009552PABPC47288.942ENSMAUG00000001295-9788.942Mesocricetus_auratus
ENSCPOG00000009552PABPC48996.085ENSMICG00000016633-10096.085Microcebus_murinus
ENSCPOG00000009552PABPC49982.721ENSMICG00000036729-10085.080Microcebus_murinus
ENSCPOG00000009552PABPC410098.042ENSMOCG00000006763Pabpc410098.042Microtus_ochrogaster
ENSCPOG00000009552PABPC410083.065ENSMMOG00000002363pabpc49983.467Mola_mola
ENSCPOG00000009552PABPC49889.352ENSMODG00000017657-10088.939Monodelphis_domestica
ENSCPOG00000009552PABPC46174.294ENSMODG00000018051-9174.294Monodelphis_domestica
ENSCPOG00000009552PABPC49982.780ENSMALG00000011017pabpc410081.762Monopterus_albus
ENSCPOG00000009552PABPC49984.068MGP_CAROLIEiJ_G0024864-10084.068Mus_caroli
ENSCPOG00000009552PABPC410097.727MGP_CAROLIEiJ_G0026435-10099.291Mus_caroli
ENSCPOG00000009552PABPC410098.182ENSMUSG00000011257Pabpc410099.405Mus_musculus
ENSCPOG00000009552PABPC49997.849MGP_PahariEiJ_G0028765Pabpc4100100.000Mus_pahari
ENSCPOG00000009552PABPC49978.900MGP_SPRETEiJ_G0027415Pabpc410099.291Mus_spretus
ENSCPOG00000009552PABPC49553.642ENSMPUG00000006836-10053.477Mustela_putorius_furo
ENSCPOG00000009552PABPC410098.939ENSMPUG00000014414-10098.939Mustela_putorius_furo
ENSCPOG00000009552PABPC410096.197ENSMLUG00000012068PABPC410096.197Myotis_lucifugus
ENSCPOG00000009552PABPC410096.818ENSNGAG00000018292Pabpc410096.818Nannospalax_galili
ENSCPOG00000009552PABPC46192.788ENSNBRG00000009708pabpc49892.788Neolamprologus_brichardi
ENSCPOG00000009552PABPC46987.006ENSNBRG00000010047-7587.006Neolamprologus_brichardi
ENSCPOG00000009552PABPC410099.525ENSNLEG00000011928PABPC410099.525Nomascus_leucogenys
ENSCPOG00000009552PABPC48598.526ENSOPRG00000011984PABPC48798.526Ochotona_princeps
ENSCPOG00000009552PABPC410098.485ENSODEG00000006592-10098.485Octodon_degus
ENSCPOG00000009552PABPC49989.117ENSODEG00000017434-10089.002Octodon_degus
ENSCPOG00000009552PABPC45485.714ENSODEG00000013457-10085.714Octodon_degus
ENSCPOG00000009552PABPC410083.281ENSONIG00000008176pabpc410083.333Oreochromis_niloticus
ENSCPOG00000009552PABPC49991.429ENSOANG00000010001PABPC410091.429Ornithorhynchus_anatinus
ENSCPOG00000009552PABPC49699.051ENSOCUG00000000562PABPC48899.051Oryctolagus_cuniculus
ENSCPOG00000009552PABPC49991.358ENSORLG00000017479pabpc49991.358Oryzias_latipes
ENSCPOG00000009552PABPC49991.358ENSORLG00020018644pabpc49991.358Oryzias_latipes_hni
ENSCPOG00000009552PABPC49991.358ENSORLG00015015042pabpc49991.358Oryzias_latipes_hsok
ENSCPOG00000009552PABPC49983.201ENSOMEG00000014410pabpc49983.669Oryzias_melastigma
ENSCPOG00000009552PABPC410096.531ENSOGAG00000004067PABPC410096.531Otolemur_garnettii
ENSCPOG00000009552PABPC410099.091ENSOARG00000020060PABPC410099.091Ovis_aries
ENSCPOG00000009552PABPC410099.394ENSPPAG00000043625PABPC410099.394Pan_paniscus
ENSCPOG00000009552PABPC410098.939ENSPPRG00000024727PABPC410098.939Panthera_pardus
ENSCPOG00000009552PABPC410098.939ENSPTIG00000005829PABPC410098.939Panthera_tigris_altaica
ENSCPOG00000009552PABPC410099.394ENSPTRG00000000573PABPC410099.394Pan_troglodytes
ENSCPOG00000009552PABPC410099.394ENSPANG00000009484PABPC410099.394Papio_anubis
ENSCPOG00000009552PABPC49984.968ENSPKIG00000025356pabpc49985.601Paramormyrops_kingsleyae
ENSCPOG00000009552PABPC49991.746ENSPSIG00000016892PABPC410091.746Pelodiscus_sinensis
ENSCPOG00000009552PABPC410084.578ENSPMGG00000009073pabpc49984.091Periophthalmus_magnuspinnatus
ENSCPOG00000009552PABPC410091.212ENSPEMG00000024193-9991.212Peromyscus_maniculatus_bairdii
ENSCPOG00000009552PABPC410097.576ENSPEMG00000023569-9997.576Peromyscus_maniculatus_bairdii
ENSCPOG00000009552PABPC49771.488ENSPMAG00000007885pabpc410070.588Petromyzon_marinus
ENSCPOG00000009552PABPC48973.484ENSPMAG00000002836pabpc410073.540Petromyzon_marinus
ENSCPOG00000009552PABPC49794.272ENSPCIG00000020674PABPC410094.048Phascolarctos_cinereus
ENSCPOG00000009552PABPC410082.786ENSPFOG00000002682pabpc410083.413Poecilia_formosa
ENSCPOG00000009552PABPC410082.629ENSPLAG00000010112pabpc410083.230Poecilia_latipinna
ENSCPOG00000009552PABPC49983.307ENSPMEG00000019739pabpc410083.573Poecilia_mexicana
ENSCPOG00000009552PABPC410083.673ENSPREG00000001589pabpc410083.673Poecilia_reticulata
ENSCPOG00000009552PABPC410099.394ENSPPYG00000001506PABPC410099.394Pongo_abelii
ENSCPOG00000009552PABPC410094.091ENSPCAG00000003341PABPC410094.091Procavia_capensis
ENSCPOG00000009552PABPC49981.664ENSPCOG00000025882-9594.059Propithecus_coquereli
ENSCPOG00000009552PABPC410099.244ENSPCOG00000023725-10099.244Propithecus_coquereli
ENSCPOG00000009552PABPC49998.655ENSPVAG00000002187PABPC410098.655Pteropus_vampyrus
ENSCPOG00000009552PABPC410083.125ENSPNYG00000006134pabpc410083.101Pundamilia_nyererei
ENSCPOG00000009552PABPC410083.568ENSPNAG00000024355pabpc410082.589Pygocentrus_nattereri
ENSCPOG00000009552PABPC410095.909ENSRNOG00000015642Pabpc410095.909Rattus_norvegicus
ENSCPOG00000009552PABPC410093.788ENSRNOG00000028592AABR07035074.110093.788Rattus_norvegicus
ENSCPOG00000009552PABPC410099.545ENSRBIG00000039761PABPC410099.545Rhinopithecus_bieti
ENSCPOG00000009552PABPC410099.545ENSRROG00000033355PABPC410099.545Rhinopithecus_roxellana
ENSCPOG00000009552PABPC410099.091ENSSBOG00000026193PABPC410099.091Saimiri_boliviensis_boliviensis
ENSCPOG00000009552PABPC49892.718ENSSHAG00000018139PABPC410092.222Sarcophilus_harrisii
ENSCPOG00000009552PABPC49985.714ENSSFOG00015023514pabpc49984.466Scleropages_formosus
ENSCPOG00000009552PABPC49982.753ENSSMAG00000009007pabpc49982.418Scophthalmus_maximus
ENSCPOG00000009552PABPC49982.726ENSSDUG00000012683pabpc49588.276Seriola_dumerili
ENSCPOG00000009552PABPC49982.726ENSSLDG00000013025pabpc49785.366Seriola_lalandi_dorsalis
ENSCPOG00000009552PABPC410091.667ENSSARG00000000310PABPC410091.667Sorex_araneus
ENSCPOG00000009552PABPC49990.000ENSSPUG00000003204PABPC410090.000Sphenodon_punctatus
ENSCPOG00000009552PABPC49990.787ENSSPAG00000009252pabpc49982.215Stegastes_partitus
ENSCPOG00000009552PABPC48949.832ENSSSCG00000036170-9649.909Sus_scrofa
ENSCPOG00000009552PABPC410099.091ENSSSCG00000003660-10099.091Sus_scrofa
ENSCPOG00000009552PABPC49987.595ENSTGUG00000001266PABPC410087.595Taeniopygia_guttata
ENSCPOG00000009552PABPC410082.233ENSTRUG00000005907pabpc49982.316Takifugu_rubripes
ENSCPOG00000009552PABPC410079.615ENSTNIG00000016902pabpc49978.213Tetraodon_nigroviridis
ENSCPOG00000009552PABPC49988.067ENSTBEG00000009035PABPC410088.067Tupaia_belangeri
ENSCPOG00000009552PABPC49982.950ENSTTRG00000014340PABPC410086.723Tursiops_truncatus
ENSCPOG00000009552PABPC410098.732ENSUAMG00000000303PABPC410098.732Ursus_americanus
ENSCPOG00000009552PABPC410098.636ENSUMAG00000019585PABPC410099.057Ursus_maritimus
ENSCPOG00000009552PABPC48497.163ENSVPAG00000010041PABPC47797.163Vicugna_pacos
ENSCPOG00000009552PABPC410098.891ENSVVUG00000005215PABPC410098.891Vulpes_vulpes
ENSCPOG00000009552PABPC46197.024ENSXETG00000027221-10097.024Xenopus_tropicalis
ENSCPOG00000009552PABPC49983.492ENSXETG00000010946pabpc410083.492Xenopus_tropicalis
ENSCPOG00000009552PABPC49989.610ENSXCOG00000013190pabpc49690.566Xiphophorus_couchianus
ENSCPOG00000009552PABPC410082.942ENSXMAG00000019007pabpc410083.075Xiphophorus_maculatus

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