EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000009696 (Gene tree)
Gene ID: -
Gene Symbol: R3HCC1
Alias: DKFZp564N123
Full Name: R3H domain and coiled-coil containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 6145 bases
Position: chrDS562856.1:59825313-59831457
Accession: 100729699
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008702	R3H	PF01424.22	1.1e-15	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009783	R3HCC1-201	1410	XM_003479663	ENSCPOP00000008702	470 (aa)	XP_003479711	H0VF71

Gene Model

Click here to download ENSCPOG00000009696's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009696's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009696	R3HCC1	99	69.492	ENSG00000104679	R3HCC1	100	95.349	Homo_sapiens
ENSCPOG00000009696	R3HCC1	61	45.098	ENSAPOG00000003616	r3hcc1	65	45.098	Acanthochromis_polyacanthus
ENSCPOG00000009696	R3HCC1	100	64.905	ENSAMEG00000002963	R3HCC1	91	65.116	Ailuropoda_melanoleuca
ENSCPOG00000009696	R3HCC1	98	32.473	ENSACIG00000017144	r3hcc1	95	38.125	Amphilophus_citrinellus
ENSCPOG00000009696	R3HCC1	58	48.252	ENSAOCG00000003945	r3hcc1	66	48.252	Amphiprion_ocellaris
ENSCPOG00000009696	R3HCC1	58	48.252	ENSAPEG00000003613	r3hcc1	66	48.252	Amphiprion_percula
ENSCPOG00000009696	R3HCC1	58	40.373	ENSATEG00000023860	r3hcc1	72	39.766	Anabas_testudineus
ENSCPOG00000009696	R3HCC1	98	43.006	ENSACAG00000016627	R3HCC1	96	43.648	Anolis_carolinensis
ENSCPOG00000009696	R3HCC1	100	69.895	ENSANAG00000036169	R3HCC1	94	69.895	Aotus_nancymaae
ENSCPOG00000009696	R3HCC1	99	64.286	ENSBTAG00000025830	R3HCC1	95	64.435	Bos_taurus
ENSCPOG00000009696	R3HCC1	99	68.644	ENSCJAG00000020118	R3HCC1	98	61.229	Callithrix_jacchus
ENSCPOG00000009696	R3HCC1	100	63.425	ENSCAFG00000009210	R3HCC1	95	63.848	Canis_familiaris
ENSCPOG00000009696	R3HCC1	86	60.988	ENSCAFG00020012870	R3HCC1	86	61.728	Canis_lupus_dingo
ENSCPOG00000009696	R3HCC1	99	64.496	ENSCHIG00000009107	R3HCC1	98	64.644	Capra_hircus
ENSCPOG00000009696	R3HCC1	99	69.851	ENSTSYG00000000511	R3HCC1	76	69.851	Carlito_syrichta
ENSCPOG00000009696	R3HCC1	91	95.105	ENSCAPG00000015813	R3HCC1	100	95.105	Cavia_aperea
ENSCPOG00000009696	R3HCC1	99	70.127	ENSCCAG00000037811	R3HCC1	98	62.712	Cebus_capucinus
ENSCPOG00000009696	R3HCC1	99	69.492	ENSCATG00000032971	R3HCC1	98	63.136	Cercocebus_atys
ENSCPOG00000009696	R3HCC1	100	79.574	ENSCLAG00000015556	R3HCC1	83	79.574	Chinchilla_lanigera
ENSCPOG00000009696	R3HCC1	99	69.280	ENSCSAG00000016250	R3HCC1	90	69.915	Chlorocebus_sabaeus
ENSCPOG00000009696	R3HCC1	99	62.526	ENSCHOG00000000396	R3HCC1	95	62.737	Choloepus_hoffmanni
ENSCPOG00000009696	R3HCC1	99	69.915	ENSCANG00000029441	R3HCC1	98	63.136	Colobus_angolensis_palliatus
ENSCPOG00000009696	R3HCC1	99	59.188	ENSCGRG00001014977	R3hcc1	99	64.435	Cricetulus_griseus_chok1gshd
ENSCPOG00000009696	R3HCC1	99	59.188	ENSCGRG00000004454	R3hcc1	99	64.435	Cricetulus_griseus_crigri
ENSCPOG00000009696	R3HCC1	97	32.035	ENSCSEG00000005748	r3hcc1	98	32.035	Cynoglossus_semilaevis
ENSCPOG00000009696	R3HCC1	62	46.154	ENSDARG00000099593	r3hcc1	73	46.154	Danio_rerio
ENSCPOG00000009696	R3HCC1	100	65.751	ENSDNOG00000007168	R3HCC1	91	65.751	Dasypus_novemcinctus
ENSCPOG00000009696	R3HCC1	99	59.846	ENSDORG00000026365	R3hcc1	99	63.617	Dipodomys_ordii
ENSCPOG00000009696	R3HCC1	99	56.875	ENSETEG00000001147	R3HCC1	95	58.263	Echinops_telfairi
ENSCPOG00000009696	R3HCC1	100	66.316	ENSEASG00005018782	R3HCC1	80	66.316	Equus_asinus_asinus
ENSCPOG00000009696	R3HCC1	100	66.105	ENSECAG00000025013	R3HCC1	97	66.316	Equus_caballus
ENSCPOG00000009696	R3HCC1	100	60.970	ENSEEUG00000011918	R3HCC1	96	60.970	Erinaceus_europaeus
ENSCPOG00000009696	R3HCC1	94	36.522	ENSELUG00000023650	r3hcc1	99	36.522	Esox_lucius
ENSCPOG00000009696	R3HCC1	100	66.737	ENSFCAG00000012395	R3HCC1	96	66.737	Felis_catus
ENSCPOG00000009696	R3HCC1	100	75.527	ENSFDAG00000001572	R3HCC1	99	75.527	Fukomys_damarensis
ENSCPOG00000009696	R3HCC1	59	37.589	ENSGMOG00000017590	-	80	37.589	Gadus_morhua
ENSCPOG00000009696	R3HCC1	61	46.809	ENSGAFG00000008747	-	68	42.105	Gambusia_affinis
ENSCPOG00000009696	R3HCC1	61	46.154	ENSGACG00000008447	r3hcc1	67	46.154	Gasterosteus_aculeatus
ENSCPOG00000009696	R3HCC1	99	69.872	ENSGGOG00000013817	R3HCC1	98	69.872	Gorilla_gorilla
ENSCPOG00000009696	R3HCC1	53	46.465	ENSHBUG00000022250	-	74	46.465	Haplochromis_burtoni
ENSCPOG00000009696	R3HCC1	100	75.106	ENSHGLG00000010517	R3HCC1	91	75.106	Heterocephalus_glaber_female
ENSCPOG00000009696	R3HCC1	100	75.106	ENSHGLG00100006388	R3HCC1	91	75.106	Heterocephalus_glaber_male
ENSCPOG00000009696	R3HCC1	59	46.154	ENSHCOG00000011745	r3hcc1	67	44.853	Hippocampus_comes
ENSCPOG00000009696	R3HCC1	98	33.906	ENSIPUG00000024504	r3hcc1	87	34.335	Ictalurus_punctatus
ENSCPOG00000009696	R3HCC1	100	60.417	ENSSTOG00000027130	R3HCC1	94	60.417	Ictidomys_tridecemlineatus
ENSCPOG00000009696	R3HCC1	99	63.347	ENSJJAG00000013075	R3hcc1	99	66.879	Jaculus_jaculus
ENSCPOG00000009696	R3HCC1	59	44.755	ENSKMAG00000000286	r3hcc1	67	44.755	Kryptolebias_marmoratus
ENSCPOG00000009696	R3HCC1	98	36.515	ENSLACG00000011894	R3HCC1	97	36.515	Latimeria_chalumnae
ENSCPOG00000009696	R3HCC1	98	35.294	ENSLOCG00000015442	r3hcc1	94	35.294	Lepisosteus_oculatus
ENSCPOG00000009696	R3HCC1	99	69.053	ENSLAFG00000016137	R3HCC1	94	69.958	Loxodonta_africana
ENSCPOG00000009696	R3HCC1	99	69.703	ENSMFAG00000032894	R3HCC1	98	63.347	Macaca_fascicularis
ENSCPOG00000009696	R3HCC1	99	69.703	ENSMMUG00000016655	R3HCC1	98	63.347	Macaca_mulatta
ENSCPOG00000009696	R3HCC1	99	69.280	ENSMNEG00000043283	R3HCC1	98	62.924	Macaca_nemestrina
ENSCPOG00000009696	R3HCC1	99	69.703	ENSMLEG00000030147	R3HCC1	98	62.924	Mandrillus_leucophaeus
ENSCPOG00000009696	R3HCC1	56	45.455	ENSMAMG00000018146	r3hcc1	71	45.455	Mastacembelus_armatus
ENSCPOG00000009696	R3HCC1	99	41.754	ENSMGAG00000001356	R3HCC1	90	41.754	Meleagris_gallopavo
ENSCPOG00000009696	R3HCC1	55	68.846	ENSMAUG00000016096	R3hcc1	99	63.975	Mesocricetus_auratus
ENSCPOG00000009696	R3HCC1	99	69.851	ENSMICG00000011146	R3HCC1	92	70.064	Microcebus_murinus
ENSCPOG00000009696	R3HCC1	99	43.340	ENSMODG00000016809	-	99	42.412	Monodelphis_domestica
ENSCPOG00000009696	R3HCC1	56	43.750	ENSMALG00000000731	r3hcc1	64	43.750	Monopterus_albus
ENSCPOG00000009696	R3HCC1	55	69.380	MGP_CAROLIEiJ_G0019467	R3hcc1	99	63.599	Mus_caroli
ENSCPOG00000009696	R3HCC1	100	60.606	ENSMUSG00000034194	R3hcc1	99	62.398	Mus_musculus
ENSCPOG00000009696	R3HCC1	99	60.362	MGP_PahariEiJ_G0030484	R3hcc1	99	60.976	Mus_pahari
ENSCPOG00000009696	R3HCC1	55	68.340	MGP_SPRETEiJ_G0020359	R3hcc1	99	62.272	Mus_spretus
ENSCPOG00000009696	R3HCC1	100	64.706	ENSMPUG00000003457	R3HCC1	86	64.916	Mustela_putorius_furo
ENSCPOG00000009696	R3HCC1	100	62.526	ENSMLUG00000000266	R3HCC1	91	63.180	Myotis_lucifugus
ENSCPOG00000009696	R3HCC1	87	79.870	ENSNGAG00000016747	R3hcc1	99	68.354	Nannospalax_galili
ENSCPOG00000009696	R3HCC1	91	67.816	ENSNLEG00000015944	R3HCC1	85	68.519	Nomascus_leucogenys
ENSCPOG00000009696	R3HCC1	99	51.158	ENSMEUG00000010587	R3HCC1	97	51.158	Notamacropus_eugenii
ENSCPOG00000009696	R3HCC1	100	62.712	ENSOPRG00000013390	R3HCC1	94	62.712	Ochotona_princeps
ENSCPOG00000009696	R3HCC1	99	72.255	ENSODEG00000007529	R3HCC1	99	72.530	Octodon_degus
ENSCPOG00000009696	R3HCC1	99	52.119	ENSOANG00000013877	R3HCC1	95	50.943	Ornithorhynchus_anatinus
ENSCPOG00000009696	R3HCC1	99	62.447	ENSOCUG00000023554	R3HCC1	85	62.447	Oryctolagus_cuniculus
ENSCPOG00000009696	R3HCC1	74	38.350	ENSORLG00000016816	r3hcc1	97	33.408	Oryzias_latipes
ENSCPOG00000009696	R3HCC1	74	37.799	ENSORLG00020012005	r3hcc1	97	33.409	Oryzias_latipes_hni
ENSCPOG00000009696	R3HCC1	64	44.595	ENSORLG00015007018	r3hcc1	79	46.099	Oryzias_latipes_hsok
ENSCPOG00000009696	R3HCC1	94	33.260	ENSOMEG00000000816	r3hcc1	99	33.260	Oryzias_melastigma
ENSCPOG00000009696	R3HCC1	99	67.021	ENSOGAG00000001291	R3HCC1	91	67.021	Otolemur_garnettii
ENSCPOG00000009696	R3HCC1	99	64.842	ENSOARG00000010146	R3HCC1	95	64.990	Ovis_aries
ENSCPOG00000009696	R3HCC1	99	69.280	ENSPPAG00000033165	R3HCC1	98	69.280	Pan_paniscus
ENSCPOG00000009696	R3HCC1	99	66.738	ENSPPRG00000002522	R3HCC1	99	66.738	Panthera_pardus
ENSCPOG00000009696	R3HCC1	92	64.977	ENSPTIG00000011230	R3HCC1	95	64.598	Panthera_tigris_altaica
ENSCPOG00000009696	R3HCC1	99	69.915	ENSPTRG00000020076	R3HCC1	98	64.831	Pan_troglodytes
ENSCPOG00000009696	R3HCC1	99	69.492	ENSPANG00000000453	R3HCC1	98	63.136	Papio_anubis
ENSCPOG00000009696	R3HCC1	91	34.562	ENSPKIG00000020397	-	95	33.256	Paramormyrops_kingsleyae
ENSCPOG00000009696	R3HCC1	73	50.000	ENSPKIG00000014426	-	95	50.000	Paramormyrops_kingsleyae
ENSCPOG00000009696	R3HCC1	99	45.851	ENSPSIG00000017664	R3HCC1	97	45.643	Pelodiscus_sinensis
ENSCPOG00000009696	R3HCC1	50	59.036	ENSPMGG00000007792	r3hcc1	99	32.112	Periophthalmus_magnuspinnatus
ENSCPOG00000009696	R3HCC1	100	63.105	ENSPEMG00000007118	R3hcc1	99	64.718	Peromyscus_maniculatus_bairdii
ENSCPOG00000009696	R3HCC1	91	45.516	ENSPCIG00000022718	-	83	45.701	Phascolarctos_cinereus
ENSCPOG00000009696	R3HCC1	65	41.718	ENSPFOG00000022301	r3hcc1	68	41.718	Poecilia_formosa
ENSCPOG00000009696	R3HCC1	61	45.390	ENSPLAG00000010794	r3hcc1	68	41.718	Poecilia_latipinna
ENSCPOG00000009696	R3HCC1	65	41.718	ENSPMEG00000022515	r3hcc1	68	41.718	Poecilia_mexicana
ENSCPOG00000009696	R3HCC1	61	44.681	ENSPREG00000000713	r3hcc1	90	32.909	Poecilia_reticulata
ENSCPOG00000009696	R3HCC1	92	68.721	ENSPPYG00000018436	R3HCC1	98	68.721	Pongo_abelii
ENSCPOG00000009696	R3HCC1	69	82.432	ENSPCAG00000012229	R3HCC1	70	82.432	Procavia_capensis
ENSCPOG00000009696	R3HCC1	99	67.941	ENSPCOG00000027554	R3HCC1	98	68.153	Propithecus_coquereli
ENSCPOG00000009696	R3HCC1	99	64.831	ENSPVAG00000009829	R3HCC1	94	65.042	Pteropus_vampyrus
ENSCPOG00000009696	R3HCC1	59	48.120	ENSPNAG00000023875	r3hcc1	71	48.120	Pygocentrus_nattereri
ENSCPOG00000009696	R3HCC1	100	61.711	ENSRNOG00000016777	AABR07018321.1	81	63.544	Rattus_norvegicus
ENSCPOG00000009696	R3HCC1	99	70.551	ENSRBIG00000028045	R3HCC1	98	70.551	Rhinopithecus_bieti
ENSCPOG00000009696	R3HCC1	99	70.551	ENSRROG00000031126	R3HCC1	98	63.771	Rhinopithecus_roxellana
ENSCPOG00000009696	R3HCC1	99	69.068	ENSSBOG00000022590	R3HCC1	98	69.068	Saimiri_boliviensis_boliviensis
ENSCPOG00000009696	R3HCC1	75	69.536	ENSSHAG00000016526	-	82	69.536	Sarcophilus_harrisii
ENSCPOG00000009696	R3HCC1	92	34.253	ENSSFOG00015013507	r3hcc1	92	48.889	Scleropages_formosus
ENSCPOG00000009696	R3HCC1	93	30.482	ENSSMAG00000008647	r3hcc1	98	30.820	Scophthalmus_maximus
ENSCPOG00000009696	R3HCC1	97	32.347	ENSSDUG00000022786	r3hcc1	97	32.347	Seriola_dumerili
ENSCPOG00000009696	R3HCC1	65	45.775	ENSSLDG00000019031	r3hcc1	97	32.059	Seriola_lalandi_dorsalis
ENSCPOG00000009696	R3HCC1	58	48.951	ENSSPAG00000013497	r3hcc1	66	48.951	Stegastes_partitus
ENSCPOG00000009696	R3HCC1	99	58.577	ENSSSCG00000037347	-	91	59.072	Sus_scrofa
ENSCPOG00000009696	R3HCC1	99	64.842	ENSSSCG00000039915	-	92	65.116	Sus_scrofa
ENSCPOG00000009696	R3HCC1	60	42.647	ENSTRUG00000015880	r3hcc1	72	42.647	Takifugu_rubripes
ENSCPOG00000009696	R3HCC1	99	59.488	ENSTTRG00000012247	R3HCC1	94	59.488	Tursiops_truncatus
ENSCPOG00000009696	R3HCC1	100	64.059	ENSUAMG00000007344	R3HCC1	99	64.693	Ursus_americanus
ENSCPOG00000009696	R3HCC1	100	64.059	ENSVVUG00000005056	R3HCC1	95	64.059	Vulpes_vulpes
ENSCPOG00000009696	R3HCC1	58	47.552	ENSXCOG00000017626	r3hcc1	88	31.522	Xiphophorus_couchianus
ENSCPOG00000009696	R3HCC1	61	45.775	ENSXMAG00000018375	r3hcc1	63	45.775	Xiphophorus_maculatus