EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000009797 (Gene tree)
Gene ID: 100734537
Gene Symbol: MTREX
Alias: Dob1|KIAA0052|Mtr4|SKIV2L2|fSAP118
Full Name: Mtr4 exosome RNA helicase
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 83236 bases
Position: chrDS562884.1:6672878-6756113
Accession: 100734537
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008794	rRNA_proc-arch	PF13234.6	3.1e-87	1	1
ENSCPOP00000008794	DEAD	PF00270.29	3.9e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009885	MTREX-201	3312	XM_003470260	ENSCPOP00000008794	1042 (aa)	XP_003470308	H0VFF2

Gene Model

Click here to download ENSCPOG00000009797's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009797's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000009797	MTREX	89	37.219	ENSCPOG00000001307	SKIV2L	80	36.614

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009797	MTREX	100	98.081	ENSG00000039123	MTREX	100	98.081	Homo_sapiens
ENSCPOG00000009797	MTREX	100	83.333	ENSAPOG00000007814	mtrex	100	83.048	Acanthochromis_polyacanthus
ENSCPOG00000009797	MTREX	100	98.082	ENSAMEG00000013856	MTREX	100	98.082	Ailuropoda_melanoleuca
ENSCPOG00000009797	MTREX	91	87.879	ENSACIG00000015117	mtrex	96	87.879	Amphilophus_citrinellus
ENSCPOG00000009797	MTREX	100	83.302	ENSAOCG00000011884	mtrex	100	83.397	Amphiprion_ocellaris
ENSCPOG00000009797	MTREX	100	82.922	ENSAPEG00000019384	mtrex	100	82.952	Amphiprion_percula
ENSCPOG00000009797	MTREX	100	83.985	ENSATEG00000015117	mtrex	100	83.985	Anabas_testudineus
ENSCPOG00000009797	MTREX	95	92.720	ENSAPLG00000009694	MTREX	99	92.720	Anas_platyrhynchos
ENSCPOG00000009797	MTREX	100	90.979	ENSACAG00000015200	MTREX	96	90.787	Anolis_carolinensis
ENSCPOG00000009797	MTREX	100	98.369	ENSANAG00000023095	MTREX	100	98.369	Aotus_nancymaae
ENSCPOG00000009797	MTREX	100	82.667	ENSACLG00000001921	mtrex	100	82.650	Astatotilapia_calliptera
ENSCPOG00000009797	MTREX	95	83.735	ENSAMXG00000018751	mtrex	99	83.835	Astyanax_mexicanus
ENSCPOG00000009797	MTREX	100	97.985	ENSBTAG00000010518	MTREX	100	97.985	Bos_taurus
ENSCPOG00000009797	MTREX	91	53.628	WBGene00012342	mtr-4	94	53.251	Caenorhabditis_elegans
ENSCPOG00000009797	MTREX	100	97.615	ENSCJAG00000001773	MTREX	100	97.615	Callithrix_jacchus
ENSCPOG00000009797	MTREX	100	98.081	ENSCAFG00000006818	MTREX	100	98.081	Canis_familiaris
ENSCPOG00000009797	MTREX	100	98.081	ENSCAFG00020024352	MTREX	100	98.081	Canis_lupus_dingo
ENSCPOG00000009797	MTREX	100	98.177	ENSCHIG00000024413	MTREX	100	98.177	Capra_hircus
ENSCPOG00000009797	MTREX	94	98.025	ENSTSYG00000007389	MTREX	100	98.025	Carlito_syrichta
ENSCPOG00000009797	MTREX	96	74.649	ENSCAPG00000008696	MTREX	100	74.649	Cavia_aperea
ENSCPOG00000009797	MTREX	100	98.273	ENSCCAG00000014177	MTREX	100	98.273	Cebus_capucinus
ENSCPOG00000009797	MTREX	100	98.081	ENSCATG00000042153	MTREX	100	98.081	Cercocebus_atys
ENSCPOG00000009797	MTREX	100	98.752	ENSCLAG00000006622	MTREX	100	98.752	Chinchilla_lanigera
ENSCPOG00000009797	MTREX	100	93.589	ENSCSAG00000016445	MTREX	100	93.589	Chlorocebus_sabaeus
ENSCPOG00000009797	MTREX	70	98.611	ENSCHOG00000010936	-	70	98.611	Choloepus_hoffmanni
ENSCPOG00000009797	MTREX	100	91.946	ENSCPBG00000026551	MTREX	94	92.330	Chrysemys_picta_bellii
ENSCPOG00000009797	MTREX	99	66.698	ENSCING00000003239	-	99	66.444	Ciona_intestinalis
ENSCPOG00000009797	MTREX	99	65.810	ENSCSAVG00000009304	-	100	70.108	Ciona_savignyi
ENSCPOG00000009797	MTREX	100	97.985	ENSCANG00000035770	MTREX	100	97.985	Colobus_angolensis_palliatus
ENSCPOG00000009797	MTREX	100	97.121	ENSCGRG00001024680	Mtrex	100	97.121	Cricetulus_griseus_chok1gshd
ENSCPOG00000009797	MTREX	100	97.121	ENSCGRG00000000307	Mtrex	100	97.121	Cricetulus_griseus_crigri
ENSCPOG00000009797	MTREX	100	82.044	ENSCSEG00000018621	mtrex	98	82.139	Cynoglossus_semilaevis
ENSCPOG00000009797	MTREX	100	83.003	ENSCVAG00000004556	mtrex	100	83.699	Cyprinodon_variegatus
ENSCPOG00000009797	MTREX	100	84.527	ENSDARG00000013457	mtrex	100	84.432	Danio_rerio
ENSCPOG00000009797	MTREX	100	96.463	ENSDNOG00000015375	MTREX	100	96.176	Dasypus_novemcinctus
ENSCPOG00000009797	MTREX	100	97.505	ENSDORG00000006782	Mtrex	100	97.505	Dipodomys_ordii
ENSCPOG00000009797	MTREX	99	62.571	FBgn0001986	Mtr4	99	62.747	Drosophila_melanogaster
ENSCPOG00000009797	MTREX	90	80.330	ENSETEG00000000727	MTREX	90	80.330	Echinops_telfairi
ENSCPOG00000009797	MTREX	99	74.495	ENSEBUG00000012869	mtrex	99	74.495	Eptatretus_burgeri
ENSCPOG00000009797	MTREX	100	97.793	ENSEASG00005013270	MTREX	100	97.793	Equus_asinus_asinus
ENSCPOG00000009797	MTREX	100	97.889	ENSECAG00000023723	MTREX	100	99.537	Equus_caballus
ENSCPOG00000009797	MTREX	98	88.585	ENSEEUG00000000527	MTREX	100	88.585	Erinaceus_europaeus
ENSCPOG00000009797	MTREX	98	84.966	ENSELUG00000004898	mtrex	100	89.601	Esox_lucius
ENSCPOG00000009797	MTREX	100	97.985	ENSFCAG00000010575	MTREX	100	97.985	Felis_catus
ENSCPOG00000009797	MTREX	100	89.923	ENSFALG00000010850	MTREX	100	90.125	Ficedula_albicollis
ENSCPOG00000009797	MTREX	100	97.793	ENSFDAG00000011199	MTREX	100	97.793	Fukomys_damarensis
ENSCPOG00000009797	MTREX	100	83.524	ENSFHEG00000023014	mtrex	100	82.762	Fundulus_heteroclitus
ENSCPOG00000009797	MTREX	100	79.695	ENSGMOG00000014702	mtrex	100	79.753	Gadus_morhua
ENSCPOG00000009797	MTREX	100	90.526	ENSGALG00000014709	MTREX	86	90.526	Gallus_gallus
ENSCPOG00000009797	MTREX	100	83.714	ENSGAFG00000012425	mtrex	100	83.714	Gambusia_affinis
ENSCPOG00000009797	MTREX	100	79.752	ENSGACG00000016260	mtrex	96	85.435	Gasterosteus_aculeatus
ENSCPOG00000009797	MTREX	100	92.042	ENSGAGG00000020036	MTREX	100	92.042	Gopherus_agassizii
ENSCPOG00000009797	MTREX	100	98.177	ENSGGOG00000001867	MTREX	100	98.177	Gorilla_gorilla
ENSCPOG00000009797	MTREX	100	82.667	ENSHBUG00000006229	mtrex	100	82.650	Haplochromis_burtoni
ENSCPOG00000009797	MTREX	100	98.177	ENSHGLG00000019445	SKIV2L2	100	98.177	Heterocephalus_glaber_female
ENSCPOG00000009797	MTREX	100	98.177	ENSHGLG00100011833	SKIV2L2	100	98.177	Heterocephalus_glaber_male
ENSCPOG00000009797	MTREX	91	84.725	ENSHCOG00000019995	mtrex	100	84.725	Hippocampus_comes
ENSCPOG00000009797	MTREX	100	85.100	ENSIPUG00000024348	skiv2l2	100	84.828	Ictalurus_punctatus
ENSCPOG00000009797	MTREX	100	98.081	ENSSTOG00000010802	MTREX	100	98.081	Ictidomys_tridecemlineatus
ENSCPOG00000009797	MTREX	100	90.403	ENSJJAG00000020975	Mtrex	100	90.403	Jaculus_jaculus
ENSCPOG00000009797	MTREX	100	83.031	ENSKMAG00000012642	mtrex	100	82.936	Kryptolebias_marmoratus
ENSCPOG00000009797	MTREX	100	83.333	ENSLBEG00000019367	mtrex	99	86.131	Labrus_bergylta
ENSCPOG00000009797	MTREX	100	88.697	ENSLACG00000009075	MTREX	100	88.337	Latimeria_chalumnae
ENSCPOG00000009797	MTREX	100	87.261	ENSLOCG00000010186	mtrex	100	87.177	Lepisosteus_oculatus
ENSCPOG00000009797	MTREX	99	95.489	ENSLAFG00000010497	MTREX	100	95.489	Loxodonta_africana
ENSCPOG00000009797	MTREX	100	98.081	ENSMFAG00000031610	MTREX	100	98.081	Macaca_fascicularis
ENSCPOG00000009797	MTREX	100	96.648	ENSMMUG00000010379	MTREX	100	96.648	Macaca_mulatta
ENSCPOG00000009797	MTREX	100	98.081	ENSMNEG00000032746	MTREX	100	98.081	Macaca_nemestrina
ENSCPOG00000009797	MTREX	100	98.081	ENSMLEG00000041051	MTREX	100	98.081	Mandrillus_leucophaeus
ENSCPOG00000009797	MTREX	100	82.808	ENSMAMG00000016753	mtrex	98	86.172	Mastacembelus_armatus
ENSCPOG00000009797	MTREX	100	82.667	ENSMZEG00005000414	mtrex	100	82.650	Maylandia_zebra
ENSCPOG00000009797	MTREX	94	67.510	ENSMGAG00000003980	MTREX	99	67.510	Meleagris_gallopavo
ENSCPOG00000009797	MTREX	100	97.217	ENSMAUG00000010727	Mtrex	100	97.217	Mesocricetus_auratus
ENSCPOG00000009797	MTREX	100	98.464	ENSMICG00000012779	MTREX	100	98.464	Microcebus_murinus
ENSCPOG00000009797	MTREX	100	97.121	ENSMOCG00000019886	Mtrex	100	97.121	Microtus_ochrogaster
ENSCPOG00000009797	MTREX	100	81.966	ENSMMOG00000002476	mtrex	100	81.966	Mola_mola
ENSCPOG00000009797	MTREX	100	93.090	ENSMODG00000019494	MTREX	100	93.301	Monodelphis_domestica
ENSCPOG00000009797	MTREX	92	82.497	ENSMALG00000002917	mtrex	99	82.497	Monopterus_albus
ENSCPOG00000009797	MTREX	100	96.737	MGP_CAROLIEiJ_G0018896	Mtrex	100	96.737	Mus_caroli
ENSCPOG00000009797	MTREX	100	96.833	ENSMUSG00000016018	Mtrex	100	96.833	Mus_musculus
ENSCPOG00000009797	MTREX	100	96.929	MGP_PahariEiJ_G0015967	Mtrex	100	96.929	Mus_pahari
ENSCPOG00000009797	MTREX	100	96.833	MGP_SPRETEiJ_G0019775	Mtrex	100	96.833	Mus_spretus
ENSCPOG00000009797	MTREX	100	98.369	ENSMPUG00000007619	MTREX	100	98.369	Mustela_putorius_furo
ENSCPOG00000009797	MTREX	100	96.459	ENSMLUG00000001152	MTREX	100	96.459	Myotis_lucifugus
ENSCPOG00000009797	MTREX	100	97.505	ENSNGAG00000011938	Mtrex	100	97.505	Nannospalax_galili
ENSCPOG00000009797	MTREX	100	82.762	ENSNBRG00000011293	mtrex	100	82.745	Neolamprologus_brichardi
ENSCPOG00000009797	MTREX	100	94.061	ENSNLEG00000001494	MTREX	100	94.061	Nomascus_leucogenys
ENSCPOG00000009797	MTREX	83	100.000	ENSMEUG00000006496	-	83	100.000	Notamacropus_eugenii
ENSCPOG00000009797	MTREX	100	82.150	ENSOPRG00000008009	MTREX	100	82.150	Ochotona_princeps
ENSCPOG00000009797	MTREX	100	97.985	ENSODEG00000017234	MTREX	100	97.985	Octodon_degus
ENSCPOG00000009797	MTREX	100	82.571	ENSONIG00000007587	mtrex	100	82.555	Oreochromis_niloticus
ENSCPOG00000009797	MTREX	100	98.177	ENSOCUG00000004463	MTREX	100	98.177	Oryctolagus_cuniculus
ENSCPOG00000009797	MTREX	100	82.431	ENSORLG00000005443	mtrex	100	82.521	Oryzias_latipes
ENSCPOG00000009797	MTREX	100	82.336	ENSORLG00020006329	mtrex	100	82.426	Oryzias_latipes_hni
ENSCPOG00000009797	MTREX	100	82.526	ENSORLG00015012924	mtrex	100	82.521	Oryzias_latipes_hsok
ENSCPOG00000009797	MTREX	100	81.844	ENSOMEG00000008825	mtrex	100	81.654	Oryzias_melastigma
ENSCPOG00000009797	MTREX	100	97.793	ENSOGAG00000002886	MTREX	100	97.793	Otolemur_garnettii
ENSCPOG00000009797	MTREX	100	97.895	ENSOARG00000007764	MTREX	100	97.895	Ovis_aries
ENSCPOG00000009797	MTREX	100	98.081	ENSPPAG00000039291	MTREX	100	98.081	Pan_paniscus
ENSCPOG00000009797	MTREX	100	97.985	ENSPPRG00000019701	MTREX	100	97.985	Panthera_pardus
ENSCPOG00000009797	MTREX	100	96.449	ENSPTIG00000009313	MTREX	100	96.449	Panthera_tigris_altaica
ENSCPOG00000009797	MTREX	100	98.081	ENSPTRG00000016878	MTREX	100	98.081	Pan_troglodytes
ENSCPOG00000009797	MTREX	100	97.985	ENSPANG00000009697	MTREX	100	97.985	Papio_anubis
ENSCPOG00000009797	MTREX	100	86.819	ENSPKIG00000020833	mtrex	99	87.792	Paramormyrops_kingsleyae
ENSCPOG00000009797	MTREX	100	91.659	ENSPSIG00000012150	MTREX	100	92.138	Pelodiscus_sinensis
ENSCPOG00000009797	MTREX	100	81.506	ENSPMGG00000002582	mtrex	100	81.506	Periophthalmus_magnuspinnatus
ENSCPOG00000009797	MTREX	95	65.996	ENSPMAG00000009668	mtrex	100	65.663	Petromyzon_marinus
ENSCPOG00000009797	MTREX	91	96.938	ENSPCIG00000024730	MTREX	100	96.938	Phascolarctos_cinereus
ENSCPOG00000009797	MTREX	75	87.452	ENSPFOG00000003141	mtrex	100	87.690	Poecilia_formosa
ENSCPOG00000009797	MTREX	100	83.889	ENSPLAG00000021311	mtrex	100	83.889	Poecilia_latipinna
ENSCPOG00000009797	MTREX	91	87.618	ENSPMEG00000010597	mtrex	99	87.933	Poecilia_mexicana
ENSCPOG00000009797	MTREX	100	83.889	ENSPREG00000003089	mtrex	100	83.889	Poecilia_reticulata
ENSCPOG00000009797	MTREX	98	98.146	ENSPPYG00000015469	MTREX	98	98.146	Pongo_abelii
ENSCPOG00000009797	MTREX	94	83.256	ENSPCAG00000013120	MTREX	94	83.256	Procavia_capensis
ENSCPOG00000009797	MTREX	99	92.219	ENSPCOG00000018092	MTREX	100	92.114	Propithecus_coquereli
ENSCPOG00000009797	MTREX	100	98.177	ENSPVAG00000002445	MTREX	100	98.177	Pteropus_vampyrus
ENSCPOG00000009797	MTREX	100	82.571	ENSPNYG00000006164	mtrex	100	82.555	Pundamilia_nyererei
ENSCPOG00000009797	MTREX	100	86.055	ENSPNAG00000008794	mtrex	100	85.891	Pygocentrus_nattereri
ENSCPOG00000009797	MTREX	99	96.599	ENSRNOG00000010125	Mtrex	97	96.599	Rattus_norvegicus
ENSCPOG00000009797	MTREX	100	96.353	ENSRBIG00000034930	MTREX	100	96.353	Rhinopithecus_bieti
ENSCPOG00000009797	MTREX	100	98.081	ENSRROG00000039895	MTREX	100	98.081	Rhinopithecus_roxellana
ENSCPOG00000009797	MTREX	89	55.451	YJL050W	MTR4	89	55.451	Saccharomyces_cerevisiae
ENSCPOG00000009797	MTREX	100	98.177	ENSSBOG00000026693	MTREX	100	98.177	Saimiri_boliviensis_boliviensis
ENSCPOG00000009797	MTREX	96	95.587	ENSSHAG00000004600	MTREX	100	95.587	Sarcophilus_harrisii
ENSCPOG00000009797	MTREX	100	87.476	ENSSFOG00015014355	skiv2l2	100	87.285	Scleropages_formosus
ENSCPOG00000009797	MTREX	100	82.841	ENSSMAG00000007572	mtrex	100	82.841	Scophthalmus_maximus
ENSCPOG00000009797	MTREX	100	83.619	ENSSDUG00000023789	mtrex	100	83.619	Seriola_dumerili
ENSCPOG00000009797	MTREX	100	83.365	ENSSLDG00000006301	mtrex	100	83.365	Seriola_lalandi_dorsalis
ENSCPOG00000009797	MTREX	100	93.954	ENSSARG00000008387	MTREX	100	93.954	Sorex_araneus
ENSCPOG00000009797	MTREX	100	79.578	ENSSPUG00000007071	MTREX	100	79.578	Sphenodon_punctatus
ENSCPOG00000009797	MTREX	91	87.303	ENSSPAG00000011319	mtrex	94	87.828	Stegastes_partitus
ENSCPOG00000009797	MTREX	100	98.081	ENSSSCG00000016911	MTREX	100	98.081	Sus_scrofa
ENSCPOG00000009797	MTREX	100	89.539	ENSTGUG00000002480	MTREX	100	89.347	Taeniopygia_guttata
ENSCPOG00000009797	MTREX	100	82.857	ENSTRUG00000014571	mtrex	100	82.745	Takifugu_rubripes
ENSCPOG00000009797	MTREX	100	82.246	ENSTBEG00000007769	MTREX	100	82.246	Tupaia_belangeri
ENSCPOG00000009797	MTREX	100	97.793	ENSTTRG00000008678	MTREX	100	97.793	Tursiops_truncatus
ENSCPOG00000009797	MTREX	100	98.081	ENSUAMG00000023061	MTREX	100	98.081	Ursus_americanus
ENSCPOG00000009797	MTREX	100	97.510	ENSUMAG00000009373	MTREX	99	99.770	Ursus_maritimus
ENSCPOG00000009797	MTREX	100	86.948	ENSVPAG00000011174	MTREX	100	86.948	Vicugna_pacos
ENSCPOG00000009797	MTREX	100	98.273	ENSVVUG00000021337	MTREX	100	98.273	Vulpes_vulpes
ENSCPOG00000009797	MTREX	100	88.495	ENSXETG00000032798	MTREX	100	88.495	Xenopus_tropicalis
ENSCPOG00000009797	MTREX	100	83.603	ENSXMAG00000004799	mtrex	100	83.508	Xiphophorus_maculatus