EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000009807 (Gene tree)
Gene ID: 100730935
Gene Symbol: A1CF
Alias: ACF|ACF64|ACF65|APOBEC1CF|ASP
Full Name: APOBEC1 complementation factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 80875 bases
Position: chrDS562870.1:3015129-3096003
Accession: 100730935
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008803	DND1_DSRM	PF14709.7	2.9e-24	1	1
ENSCPOP00000008803	RRM_1	PF00076.22	2.8e-39	1	3
ENSCPOP00000008803	RRM_1	PF00076.22	2.8e-39	2	3
ENSCPOP00000008803	RRM_1	PF00076.22	2.8e-39	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000009895	A1CF-201	2757	XM_003473560	ENSCPOP00000008803	594 (aa)	XP_003473608	H0VFG1

Gene Model

Click here to download ENSCPOG00000009807's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009807's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000009807	A1CF	88	70.096	ENSCPOG00000020396	-	92	70.096
ENSCPOG00000009807	A1CF	88	51.149	ENSCPOG00000019272	-	86	51.149
ENSCPOG00000009807	A1CF	52	52.751	ENSCPOG00000012415	SYNCRIP	70	45.288
ENSCPOG00000009807	A1CF	73	70.064	ENSCPOG00000010284	-	88	70.064
ENSCPOG00000009807	A1CF	75	58.553	ENSCPOG00000014100	RBM47	66	68.391

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009807	A1CF	100	95.960	ENSG00000148584	A1CF	100	99.005	Homo_sapiens
ENSCPOG00000009807	A1CF	100	72.924	ENSAPOG00000008259	a1cf	100	72.924	Acanthochromis_polyacanthus
ENSCPOG00000009807	A1CF	100	94.613	ENSAMEG00000000523	A1CF	100	94.613	Ailuropoda_melanoleuca
ENSCPOG00000009807	A1CF	100	74.062	ENSACIG00000008632	a1cf	100	75.856	Amphilophus_citrinellus
ENSCPOG00000009807	A1CF	100	73.607	ENSAOCG00000023744	a1cf	96	83.478	Amphiprion_ocellaris
ENSCPOG00000009807	A1CF	100	74.590	ENSAPEG00000009537	a1cf	100	75.410	Amphiprion_percula
ENSCPOG00000009807	A1CF	100	74.756	ENSATEG00000013720	a1cf	100	76.059	Anabas_testudineus
ENSCPOG00000009807	A1CF	100	88.403	ENSAPLG00000002964	A1CF	100	87.899	Anas_platyrhynchos
ENSCPOG00000009807	A1CF	100	83.025	ENSACAG00000015269	A1CF	100	83.025	Anolis_carolinensis
ENSCPOG00000009807	A1CF	100	95.286	ENSANAG00000019974	A1CF	100	95.286	Aotus_nancymaae
ENSCPOG00000009807	A1CF	100	72.340	ENSACLG00000017428	a1cf	100	73.813	Astatotilapia_calliptera
ENSCPOG00000009807	A1CF	100	74.050	ENSAMXG00000018180	a1cf	100	74.215	Astyanax_mexicanus
ENSCPOG00000009807	A1CF	100	93.950	ENSBTAG00000021195	A1CF	100	94.286	Bos_taurus
ENSCPOG00000009807	A1CF	100	96.801	ENSCJAG00000005045	A1CF	100	96.801	Callithrix_jacchus
ENSCPOG00000009807	A1CF	100	93.603	ENSCAFG00000015581	A1CF	100	94.276	Canis_familiaris
ENSCPOG00000009807	A1CF	100	93.603	ENSCAFG00020026421	A1CF	100	94.276	Canis_lupus_dingo
ENSCPOG00000009807	A1CF	100	94.622	ENSCHIG00000020411	A1CF	100	94.790	Capra_hircus
ENSCPOG00000009807	A1CF	95	95.382	ENSTSYG00000001755	A1CF	100	94.118	Carlito_syrichta
ENSCPOG00000009807	A1CF	100	83.742	ENSCAPG00000017386	A1CF	100	83.742	Cavia_aperea
ENSCPOG00000009807	A1CF	100	96.970	ENSCCAG00000018168	A1CF	100	96.970	Cebus_capucinus
ENSCPOG00000009807	A1CF	100	94.444	ENSCATG00000043715	A1CF	100	95.118	Cercocebus_atys
ENSCPOG00000009807	A1CF	100	97.483	ENSCLAG00000010424	A1CF	100	97.483	Chinchilla_lanigera
ENSCPOG00000009807	A1CF	100	96.633	ENSCSAG00000007032	A1CF	100	96.633	Chlorocebus_sabaeus
ENSCPOG00000009807	A1CF	98	89.492	ENSCHOG00000009089	A1CF	98	89.679	Choloepus_hoffmanni
ENSCPOG00000009807	A1CF	100	88.067	ENSCPBG00000026464	A1CF	100	87.899	Chrysemys_picta_bellii
ENSCPOG00000009807	A1CF	100	96.633	ENSCANG00000038032	A1CF	100	96.633	Colobus_angolensis_palliatus
ENSCPOG00000009807	A1CF	100	93.950	ENSCGRG00001017413	A1cf	100	94.118	Cricetulus_griseus_chok1gshd
ENSCPOG00000009807	A1CF	100	93.445	ENSCGRG00000017332	A1cf	100	93.950	Cricetulus_griseus_crigri
ENSCPOG00000009807	A1CF	100	74.129	ENSCSEG00000002361	a1cf	100	75.456	Cynoglossus_semilaevis
ENSCPOG00000009807	A1CF	100	73.616	ENSCVAG00000010520	a1cf	100	75.081	Cyprinodon_variegatus
ENSCPOG00000009807	A1CF	100	78.000	ENSDARG00000002968	a1cf	100	79.333	Danio_rerio
ENSCPOG00000009807	A1CF	100	94.286	ENSDNOG00000002829	A1CF	100	94.118	Dasypus_novemcinctus
ENSCPOG00000009807	A1CF	81	92.391	ENSETEG00000012527	A1CF	81	92.391	Echinops_telfairi
ENSCPOG00000009807	A1CF	100	95.980	ENSEASG00005012924	A1CF	100	95.980	Equus_asinus_asinus
ENSCPOG00000009807	A1CF	100	95.310	ENSECAG00000010424	A1CF	100	95.477	Equus_caballus
ENSCPOG00000009807	A1CF	78	79.828	ENSEEUG00000000013	A1CF	100	79.828	Erinaceus_europaeus
ENSCPOG00000009807	A1CF	100	78.500	ENSELUG00000003159	a1cf	100	79.500	Esox_lucius
ENSCPOG00000009807	A1CF	100	91.751	ENSFCAG00000011179	A1CF	100	91.751	Felis_catus
ENSCPOG00000009807	A1CF	100	85.714	ENSFALG00000013183	A1CF	100	85.210	Ficedula_albicollis
ENSCPOG00000009807	A1CF	100	94.286	ENSFDAG00000019371	A1CF	100	94.286	Fukomys_damarensis
ENSCPOG00000009807	A1CF	100	69.055	ENSFHEG00000019652	a1cf	96	81.250	Fundulus_heteroclitus
ENSCPOG00000009807	A1CF	100	71.570	ENSGMOG00000018943	a1cf	100	71.570	Gadus_morhua
ENSCPOG00000009807	A1CF	95	87.766	ENSGALG00000003765	A1CF	97	87.234	Gallus_gallus
ENSCPOG00000009807	A1CF	100	69.079	ENSGAFG00000014868	a1cf	100	70.559	Gambusia_affinis
ENSCPOG00000009807	A1CF	100	73.849	ENSGACG00000010241	a1cf	100	73.849	Gasterosteus_aculeatus
ENSCPOG00000009807	A1CF	94	87.900	ENSGAGG00000016508	A1CF	97	87.722	Gopherus_agassizii
ENSCPOG00000009807	A1CF	100	95.960	ENSGGOG00000009670	A1CF	100	95.960	Gorilla_gorilla
ENSCPOG00000009807	A1CF	100	72.920	ENSHBUG00000021959	a1cf	100	75.367	Haplochromis_burtoni
ENSCPOG00000009807	A1CF	100	97.143	ENSHGLG00000008955	A1CF	100	97.143	Heterocephalus_glaber_female
ENSCPOG00000009807	A1CF	100	96.471	ENSHGLG00100000518	A1CF	100	96.471	Heterocephalus_glaber_male
ENSCPOG00000009807	A1CF	95	71.601	ENSHCOG00000017669	a1cf	100	72.476	Hippocampus_comes
ENSCPOG00000009807	A1CF	89	82.836	ENSIPUG00000010367	a1cf	96	82.836	Ictalurus_punctatus
ENSCPOG00000009807	A1CF	100	75.935	ENSKMAG00000006568	a1cf	100	76.748	Kryptolebias_marmoratus
ENSCPOG00000009807	A1CF	99	74.510	ENSLBEG00000020994	a1cf	98	75.987	Labrus_bergylta
ENSCPOG00000009807	A1CF	100	81.271	ENSLACG00000008061	A1CF	100	81.104	Latimeria_chalumnae
ENSCPOG00000009807	A1CF	100	81.135	ENSLOCG00000006302	a1cf	100	80.968	Lepisosteus_oculatus
ENSCPOG00000009807	A1CF	100	94.286	ENSLAFG00000015462	A1CF	100	94.286	Loxodonta_africana
ENSCPOG00000009807	A1CF	100	94.781	ENSMFAG00000035948	A1CF	100	95.455	Macaca_fascicularis
ENSCPOG00000009807	A1CF	100	94.781	ENSMMUG00000007077	A1CF	100	95.455	Macaca_mulatta
ENSCPOG00000009807	A1CF	100	94.444	ENSMNEG00000031454	A1CF	100	95.118	Macaca_nemestrina
ENSCPOG00000009807	A1CF	100	96.465	ENSMLEG00000037223	A1CF	100	96.465	Mandrillus_leucophaeus
ENSCPOG00000009807	A1CF	100	72.340	ENSMAMG00000010402	a1cf	100	74.837	Mastacembelus_armatus
ENSCPOG00000009807	A1CF	100	75.125	ENSMZEG00005013245	a1cf	100	75.960	Maylandia_zebra
ENSCPOG00000009807	A1CF	100	87.919	ENSMGAG00000001507	A1CF	100	87.416	Meleagris_gallopavo
ENSCPOG00000009807	A1CF	100	93.109	ENSMAUG00000007422	A1cf	100	93.782	Mesocricetus_auratus
ENSCPOG00000009807	A1CF	100	93.311	ENSMICG00000003377	A1CF	100	93.813	Microcebus_murinus
ENSCPOG00000009807	A1CF	100	93.277	ENSMOCG00000021536	A1cf	100	93.109	Microtus_ochrogaster
ENSCPOG00000009807	A1CF	100	67.213	ENSMMOG00000009422	a1cf	100	69.180	Mola_mola
ENSCPOG00000009807	A1CF	92	89.011	ENSMODG00000016478	A1CF	97	90.737	Monodelphis_domestica
ENSCPOG00000009807	A1CF	100	71.452	ENSMALG00000012992	a1cf	100	71.119	Monopterus_albus
ENSCPOG00000009807	A1CF	100	92.437	MGP_CAROLIEiJ_G0022873	A1cf	100	92.605	Mus_caroli
ENSCPOG00000009807	A1CF	100	92.437	ENSMUSG00000052595	A1cf	99	95.526	Mus_musculus
ENSCPOG00000009807	A1CF	100	92.101	MGP_PahariEiJ_G0014366	A1cf	100	91.765	Mus_pahari
ENSCPOG00000009807	A1CF	100	92.101	MGP_SPRETEiJ_G0023792	A1cf	100	92.269	Mus_spretus
ENSCPOG00000009807	A1CF	100	89.057	ENSMPUG00000016971	A1CF	100	89.057	Mustela_putorius_furo
ENSCPOG00000009807	A1CF	100	93.950	ENSMLUG00000016071	A1CF	100	93.950	Myotis_lucifugus
ENSCPOG00000009807	A1CF	100	94.118	ENSNGAG00000015136	A1cf	100	94.118	Nannospalax_galili
ENSCPOG00000009807	A1CF	100	73.246	ENSNBRG00000001712	a1cf	100	75.693	Neolamprologus_brichardi
ENSCPOG00000009807	A1CF	100	96.975	ENSNLEG00000012028	A1CF	100	96.975	Nomascus_leucogenys
ENSCPOG00000009807	A1CF	94	88.968	ENSMEUG00000015909	A1CF	100	88.968	Notamacropus_eugenii
ENSCPOG00000009807	A1CF	88	85.524	ENSOPRG00000010667	A1CF	97	85.338	Ochotona_princeps
ENSCPOG00000009807	A1CF	100	73.899	ENSONIG00000019105	a1cf	100	75.367	Oreochromis_niloticus
ENSCPOG00000009807	A1CF	78	89.507	ENSOANG00000007360	A1CF	99	89.507	Ornithorhynchus_anatinus
ENSCPOG00000009807	A1CF	100	92.450	ENSOCUG00000011587	A1CF	100	93.121	Oryctolagus_cuniculus
ENSCPOG00000009807	A1CF	100	74.141	ENSORLG00000013342	a1cf	100	73.977	Oryzias_latipes
ENSCPOG00000009807	A1CF	100	75.163	ENSORLG00020000586	a1cf	100	75.654	Oryzias_latipes_hni
ENSCPOG00000009807	A1CF	100	75.000	ENSORLG00015018569	a1cf	100	75.490	Oryzias_latipes_hsok
ENSCPOG00000009807	A1CF	100	74.141	ENSOMEG00000013531	a1cf	100	73.813	Oryzias_melastigma
ENSCPOG00000009807	A1CF	100	94.444	ENSOGAG00000012884	A1CF	100	94.949	Otolemur_garnettii
ENSCPOG00000009807	A1CF	100	95.294	ENSOARG00000013695	A1CF	100	95.462	Ovis_aries
ENSCPOG00000009807	A1CF	97	93.924	ENSPPAG00000028115	A1CF	100	98.178	Pan_paniscus
ENSCPOG00000009807	A1CF	100	93.434	ENSPPRG00000012180	A1CF	100	93.434	Panthera_pardus
ENSCPOG00000009807	A1CF	100	93.434	ENSPTIG00000021223	A1CF	100	93.434	Panthera_tigris_altaica
ENSCPOG00000009807	A1CF	100	95.791	ENSPTRG00000002508	A1CF	100	95.791	Pan_troglodytes
ENSCPOG00000009807	A1CF	100	94.781	ENSPANG00000021988	A1CF	100	95.455	Papio_anubis
ENSCPOG00000009807	A1CF	100	79.833	ENSPKIG00000025176	a1cf	100	79.833	Paramormyrops_kingsleyae
ENSCPOG00000009807	A1CF	100	86.387	ENSPSIG00000010318	A1CF	100	86.218	Pelodiscus_sinensis
ENSCPOG00000009807	A1CF	88	70.476	ENSPMGG00000013359	a1cf	99	66.554	Periophthalmus_magnuspinnatus
ENSCPOG00000009807	A1CF	100	94.118	ENSPEMG00000015021	A1cf	100	93.950	Peromyscus_maniculatus_bairdii
ENSCPOG00000009807	A1CF	100	88.571	ENSPCIG00000002175	A1CF	100	88.571	Phascolarctos_cinereus
ENSCPOG00000009807	A1CF	100	75.081	ENSPFOG00000007437	-	100	76.710	Poecilia_formosa
ENSCPOG00000009807	A1CF	100	75.244	ENSPFOG00000006683	a1cf	100	76.873	Poecilia_formosa
ENSCPOG00000009807	A1CF	100	73.941	ENSPLAG00000000026	a1cf	100	75.570	Poecilia_latipinna
ENSCPOG00000009807	A1CF	100	73.941	ENSPLAG00000001210	-	100	75.570	Poecilia_latipinna
ENSCPOG00000009807	A1CF	100	66.667	ENSPMEG00000000921	a1cf	100	68.301	Poecilia_mexicana
ENSCPOG00000009807	A1CF	100	67.810	ENSPMEG00000015529	-	100	69.444	Poecilia_mexicana
ENSCPOG00000009807	A1CF	100	75.244	ENSPREG00000016298	a1cf	100	76.710	Poecilia_reticulata
ENSCPOG00000009807	A1CF	100	95.462	ENSPPYG00000002819	A1CF	100	95.462	Pongo_abelii
ENSCPOG00000009807	A1CF	79	74.153	ENSPCAG00000006463	A1CF	79	74.153	Procavia_capensis
ENSCPOG00000009807	A1CF	100	95.302	ENSPCOG00000024172	A1CF	100	95.973	Propithecus_coquereli
ENSCPOG00000009807	A1CF	100	74.225	ENSPNYG00000017944	a1cf	100	76.672	Pundamilia_nyererei
ENSCPOG00000009807	A1CF	100	79.305	ENSPNAG00000007704	a1cf	100	79.305	Pygocentrus_nattereri
ENSCPOG00000009807	A1CF	100	91.261	ENSRNOG00000033195	A1cf	100	91.429	Rattus_norvegicus
ENSCPOG00000009807	A1CF	100	89.597	ENSRBIG00000042892	A1CF	100	93.725	Rhinopithecus_bieti
ENSCPOG00000009807	A1CF	100	96.801	ENSRROG00000041398	A1CF	100	96.801	Rhinopithecus_roxellana
ENSCPOG00000009807	A1CF	100	96.639	ENSSBOG00000021930	A1CF	100	96.639	Saimiri_boliviensis_boliviensis
ENSCPOG00000009807	A1CF	100	89.412	ENSSHAG00000005096	A1CF	100	89.412	Sarcophilus_harrisii
ENSCPOG00000009807	A1CF	100	78.275	ENSSFOG00015011774	a1cf	100	78.441	Scleropages_formosus
ENSCPOG00000009807	A1CF	100	74.430	ENSSMAG00000013271	a1cf	100	74.756	Scophthalmus_maximus
ENSCPOG00000009807	A1CF	100	75.124	ENSSDUG00000013930	a1cf	100	75.954	Seriola_dumerili
ENSCPOG00000009807	A1CF	100	68.317	ENSSLDG00000004290	a1cf	100	68.977	Seriola_lalandi_dorsalis
ENSCPOG00000009807	A1CF	95	82.686	ENSSARG00000005940	A1CF	96	82.862	Sorex_araneus
ENSCPOG00000009807	A1CF	95	87.324	ENSSPUG00000006797	A1CF	95	87.170	Sphenodon_punctatus
ENSCPOG00000009807	A1CF	100	94.790	ENSSSCG00000010431	A1CF	100	94.790	Sus_scrofa
ENSCPOG00000009807	A1CF	100	87.458	ENSTGUG00000005090	A1CF	100	87.124	Taeniopygia_guttata
ENSCPOG00000009807	A1CF	100	74.388	ENSTRUG00000001982	a1cf	100	74.388	Takifugu_rubripes
ENSCPOG00000009807	A1CF	100	74.472	ENSTNIG00000003580	a1cf	100	74.472	Tetraodon_nigroviridis
ENSCPOG00000009807	A1CF	97	86.655	ENSTTRG00000013190	A1CF	95	87.002	Tursiops_truncatus
ENSCPOG00000009807	A1CF	100	93.098	ENSUAMG00000020065	A1CF	100	93.098	Ursus_americanus
ENSCPOG00000009807	A1CF	100	94.108	ENSUMAG00000011162	A1CF	100	94.108	Ursus_maritimus
ENSCPOG00000009807	A1CF	87	88.676	ENSVPAG00000006130	A1CF	86	88.676	Vicugna_pacos
ENSCPOG00000009807	A1CF	100	92.593	ENSVVUG00000002504	A1CF	100	92.761	Vulpes_vulpes
ENSCPOG00000009807	A1CF	100	77.796	ENSXETG00000006611	a1cf	100	77.462	Xenopus_tropicalis
ENSCPOG00000009807	A1CF	100	75.410	ENSXCOG00000003302	a1cf	100	76.557	Xiphophorus_couchianus
ENSCPOG00000009807	A1CF	100	76.557	ENSXMAG00000016703	a1cf	100	77.705	Xiphophorus_maculatus