EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000009965 (Gene tree)
Gene ID: 100713656
Gene Symbol: POLR1E
Alias: FLJ13390|FLJ13970|PAF53|PRAF1
Full Name: RNA polymerase I subunit E
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 24771 bases
Position: chrDS562882.1:17818228-17842998
Accession: 100713656
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000008943	RNA_pol_I_A49	PF06870.12	4.6e-109	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000010055	POLR1E-201	2940	XM_003470879	ENSCPOP00000008943	418 (aa)	XP_003470927	H0VFT2

Gene Model

Click here to download ENSCPOG00000009965's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000009965's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000009965	POLR1E	100	84.211	ENSG00000137054	POLR1E	99	84.211	Homo_sapiens
ENSCPOG00000009965	POLR1E	98	42.995	ENSAPOG00000012452	polr1e	99	42.995	Acanthochromis_polyacanthus
ENSCPOG00000009965	POLR1E	100	78.233	ENSAMEG00000010193	POLR1E	97	78.233	Ailuropoda_melanoleuca
ENSCPOG00000009965	POLR1E	94	44.913	ENSACIG00000009884	polr1e	99	44.750	Amphilophus_citrinellus
ENSCPOG00000009965	POLR1E	98	46.135	ENSAOCG00000005665	polr1e	99	46.135	Amphiprion_ocellaris
ENSCPOG00000009965	POLR1E	98	46.135	ENSAPEG00000020581	polr1e	99	46.135	Amphiprion_percula
ENSCPOG00000009965	POLR1E	97	47.188	ENSATEG00000020609	polr1e	98	47.188	Anabas_testudineus
ENSCPOG00000009965	POLR1E	80	56.806	ENSAPLG00000010340	POLR1E	99	56.806	Anas_platyrhynchos
ENSCPOG00000009965	POLR1E	100	83.971	ENSANAG00000038046	POLR1E	99	83.971	Aotus_nancymaae
ENSCPOG00000009965	POLR1E	100	44.860	ENSACLG00000013685	polr1e	99	44.860	Astatotilapia_calliptera
ENSCPOG00000009965	POLR1E	100	43.868	ENSAMXG00000018181	polr1e	99	43.868	Astyanax_mexicanus
ENSCPOG00000009965	POLR1E	100	84.928	ENSBTAG00000012243	POLR1E	99	84.928	Bos_taurus
ENSCPOG00000009965	POLR1E	89	83.690	ENSCJAG00000010512	POLR1E	93	83.690	Callithrix_jacchus
ENSCPOG00000009965	POLR1E	100	86.842	ENSCAFG00000002377	POLR1E	99	86.842	Canis_familiaris
ENSCPOG00000009965	POLR1E	100	87.081	ENSCAFG00020017851	POLR1E	99	87.081	Canis_lupus_dingo
ENSCPOG00000009965	POLR1E	100	84.211	ENSCHIG00000019479	POLR1E	99	84.211	Capra_hircus
ENSCPOG00000009965	POLR1E	100	83.732	ENSTSYG00000002075	POLR1E	99	83.732	Carlito_syrichta
ENSCPOG00000009965	POLR1E	69	99.303	ENSCAPG00000015653	POLR1E	99	99.303	Cavia_aperea
ENSCPOG00000009965	POLR1E	100	76.794	ENSCCAG00000029460	POLR1E	99	76.794	Cebus_capucinus
ENSCPOG00000009965	POLR1E	100	83.732	ENSCATG00000031732	POLR1E	99	83.732	Cercocebus_atys
ENSCPOG00000009965	POLR1E	88	93.443	ENSCLAG00000012701	POLR1E	96	93.443	Chinchilla_lanigera
ENSCPOG00000009965	POLR1E	100	83.493	ENSCSAG00000010782	POLR1E	99	83.493	Chlorocebus_sabaeus
ENSCPOG00000009965	POLR1E	94	75.827	ENSCHOG00000013024	POLR1E	82	75.827	Choloepus_hoffmanni
ENSCPOG00000009965	POLR1E	98	66.910	ENSCPBG00000006923	POLR1E	99	67.153	Chrysemys_picta_bellii
ENSCPOG00000009965	POLR1E	100	83.254	ENSCANG00000036112	POLR1E	99	83.254	Colobus_angolensis_palliatus
ENSCPOG00000009965	POLR1E	100	84.211	ENSCGRG00001006197	Polr1e	96	84.211	Cricetulus_griseus_chok1gshd
ENSCPOG00000009965	POLR1E	100	83.732	ENSCGRG00000006430	Polr1e	96	83.732	Cricetulus_griseus_crigri
ENSCPOG00000009965	POLR1E	94	43.392	ENSCSEG00000005121	polr1e	96	43.392	Cynoglossus_semilaevis
ENSCPOG00000009965	POLR1E	97	42.892	ENSCVAG00000019759	polr1e	98	42.892	Cyprinodon_variegatus
ENSCPOG00000009965	POLR1E	94	44.836	ENSDARG00000006434	polr1e	98	44.175	Danio_rerio
ENSCPOG00000009965	POLR1E	100	76.445	ENSDNOG00000010257	POLR1E	99	76.445	Dasypus_novemcinctus
ENSCPOG00000009965	POLR1E	85	78.873	ENSETEG00000018204	POLR1E	99	78.873	Echinops_telfairi
ENSCPOG00000009965	POLR1E	60	38.806	ENSEBUG00000010635	-	96	30.000	Eptatretus_burgeri
ENSCPOG00000009965	POLR1E	100	85.407	ENSEASG00005000675	POLR1E	99	85.407	Equus_asinus_asinus
ENSCPOG00000009965	POLR1E	100	85.646	ENSECAG00000014669	POLR1E	99	85.646	Equus_caballus
ENSCPOG00000009965	POLR1E	94	71.247	ENSEEUG00000011928	POLR1E	84	71.247	Erinaceus_europaeus
ENSCPOG00000009965	POLR1E	97	47.101	ENSELUG00000008150	polr1e	97	47.101	Esox_lucius
ENSCPOG00000009965	POLR1E	100	85.167	ENSFCAG00000013081	POLR1E	99	85.167	Felis_catus
ENSCPOG00000009965	POLR1E	94	62.087	ENSFALG00000012950	POLR1E	99	62.087	Ficedula_albicollis
ENSCPOG00000009965	POLR1E	100	90.431	ENSFDAG00000016917	POLR1E	100	90.431	Fukomys_damarensis
ENSCPOG00000009965	POLR1E	98	43.478	ENSFHEG00000009801	polr1e	99	43.478	Fundulus_heteroclitus
ENSCPOG00000009965	POLR1E	93	39.950	ENSGMOG00000003336	POLR1E	93	40.852	Gadus_morhua
ENSCPOG00000009965	POLR1E	98	63.196	ENSGALG00000005395	POLR1E	99	63.196	Gallus_gallus
ENSCPOG00000009965	POLR1E	97	43.627	ENSGAFG00000004850	polr1e	98	43.627	Gambusia_affinis
ENSCPOG00000009965	POLR1E	97	42.336	ENSGACG00000016087	polr1e	98	42.336	Gasterosteus_aculeatus
ENSCPOG00000009965	POLR1E	98	59.804	ENSGAGG00000001659	POLR1E	98	59.854	Gopherus_agassizii
ENSCPOG00000009965	POLR1E	100	83.971	ENSGGOG00000001882	POLR1E	99	83.971	Gorilla_gorilla
ENSCPOG00000009965	POLR1E	100	45.199	ENSHBUG00000002559	polr1e	99	45.199	Haplochromis_burtoni
ENSCPOG00000009965	POLR1E	100	91.627	ENSHGLG00000002036	POLR1E	100	91.627	Heterocephalus_glaber_female
ENSCPOG00000009965	POLR1E	100	91.866	ENSHGLG00100012784	POLR1E	100	91.866	Heterocephalus_glaber_male
ENSCPOG00000009965	POLR1E	97	45.098	ENSHCOG00000002774	polr1e	98	45.098	Hippocampus_comes
ENSCPOG00000009965	POLR1E	98	44.660	ENSIPUG00000003019	polr1e	98	44.660	Ictalurus_punctatus
ENSCPOG00000009965	POLR1E	100	87.321	ENSSTOG00000009810	POLR1E	99	87.321	Ictidomys_tridecemlineatus
ENSCPOG00000009965	POLR1E	99	85.337	ENSJJAG00000020731	Polr1e	96	85.337	Jaculus_jaculus
ENSCPOG00000009965	POLR1E	98	42.043	ENSKMAG00000000046	polr1e	99	42.043	Kryptolebias_marmoratus
ENSCPOG00000009965	POLR1E	100	45.261	ENSLBEG00000003104	polr1e	99	45.498	Labrus_bergylta
ENSCPOG00000009965	POLR1E	86	62.604	ENSLACG00000003416	POLR1E	99	62.604	Latimeria_chalumnae
ENSCPOG00000009965	POLR1E	99	50.239	ENSLOCG00000012859	polr1e	99	50.239	Lepisosteus_oculatus
ENSCPOG00000009965	POLR1E	100	84.689	ENSLAFG00000012831	POLR1E	99	84.689	Loxodonta_africana
ENSCPOG00000009965	POLR1E	100	83.971	ENSMFAG00000045465	POLR1E	99	82.353	Macaca_fascicularis
ENSCPOG00000009965	POLR1E	100	83.971	ENSMMUG00000017892	POLR1E	99	83.971	Macaca_mulatta
ENSCPOG00000009965	POLR1E	100	77.570	ENSMNEG00000040283	POLR1E	99	84.889	Macaca_nemestrina
ENSCPOG00000009965	POLR1E	100	83.971	ENSMLEG00000031135	POLR1E	99	83.971	Mandrillus_leucophaeus
ENSCPOG00000009965	POLR1E	100	44.656	ENSMAMG00000001260	polr1e	99	44.656	Mastacembelus_armatus
ENSCPOG00000009965	POLR1E	100	44.860	ENSMZEG00005021536	polr1e	99	44.860	Maylandia_zebra
ENSCPOG00000009965	POLR1E	100	83.493	ENSMAUG00000021044	Polr1e	96	83.493	Mesocricetus_auratus
ENSCPOG00000009965	POLR1E	100	84.689	ENSMICG00000003673	POLR1E	99	84.689	Microcebus_murinus
ENSCPOG00000009965	POLR1E	100	84.928	ENSMOCG00000012920	Polr1e	96	84.928	Microtus_ochrogaster
ENSCPOG00000009965	POLR1E	97	44.878	ENSMMOG00000007391	polr1e	98	44.878	Mola_mola
ENSCPOG00000009965	POLR1E	95	74.242	ENSMODG00000002884	POLR1E	97	74.242	Monodelphis_domestica
ENSCPOG00000009965	POLR1E	100	44.836	ENSMALG00000002665	polr1e	99	44.836	Monopterus_albus
ENSCPOG00000009965	POLR1E	99	81.687	MGP_CAROLIEiJ_G0025967	Polr1e	97	82.697	Mus_caroli
ENSCPOG00000009965	POLR1E	99	82.169	ENSMUSG00000028318	Polr1e	97	82.952	Mus_musculus
ENSCPOG00000009965	POLR1E	99	82.651	MGP_PahariEiJ_G0024114	Polr1e	97	83.461	Mus_pahari
ENSCPOG00000009965	POLR1E	99	81.928	MGP_SPRETEiJ_G0026930	Polr1e	97	82.697	Mus_spretus
ENSCPOG00000009965	POLR1E	100	77.350	ENSMPUG00000006040	POLR1E	99	77.350	Mustela_putorius_furo
ENSCPOG00000009965	POLR1E	100	83.014	ENSMLUG00000012688	POLR1E	96	83.014	Myotis_lucifugus
ENSCPOG00000009965	POLR1E	99	88.010	ENSNGAG00000002520	Polr1e	96	88.010	Nannospalax_galili
ENSCPOG00000009965	POLR1E	100	45.327	ENSNBRG00000016822	polr1e	99	45.327	Neolamprologus_brichardi
ENSCPOG00000009965	POLR1E	100	83.732	ENSNLEG00000003616	POLR1E	99	83.732	Nomascus_leucogenys
ENSCPOG00000009965	POLR1E	73	77.500	ENSMEUG00000015372	-	80	77.500	Notamacropus_eugenii
ENSCPOG00000009965	POLR1E	86	71.508	ENSOPRG00000014206	POLR1E	99	71.508	Ochotona_princeps
ENSCPOG00000009965	POLR1E	100	91.866	ENSODEG00000014565	POLR1E	97	91.866	Octodon_degus
ENSCPOG00000009965	POLR1E	100	45.561	ENSONIG00000008921	polr1e	99	45.561	Oreochromis_niloticus
ENSCPOG00000009965	POLR1E	100	82.536	ENSOCUG00000024773	POLR1E	99	82.536	Oryctolagus_cuniculus
ENSCPOG00000009965	POLR1E	98	44.819	ENSORLG00000005143	polr1e	99	44.819	Oryzias_latipes
ENSCPOG00000009965	POLR1E	92	44.444	ENSORLG00020007271	polr1e	99	44.020	Oryzias_latipes_hni
ENSCPOG00000009965	POLR1E	98	44.578	ENSORLG00015000137	polr1e	99	44.578	Oryzias_latipes_hsok
ENSCPOG00000009965	POLR1E	97	43.720	ENSOMEG00000013264	polr1e	96	43.720	Oryzias_melastigma
ENSCPOG00000009965	POLR1E	100	85.167	ENSOGAG00000012981	POLR1E	97	85.167	Otolemur_garnettii
ENSCPOG00000009965	POLR1E	100	84.450	ENSOARG00000011465	POLR1E	96	84.450	Ovis_aries
ENSCPOG00000009965	POLR1E	100	83.971	ENSPPAG00000034566	POLR1E	99	83.971	Pan_paniscus
ENSCPOG00000009965	POLR1E	100	84.450	ENSPPRG00000005649	POLR1E	99	84.450	Panthera_pardus
ENSCPOG00000009965	POLR1E	100	84.450	ENSPTIG00000009774	POLR1E	99	84.450	Panthera_tigris_altaica
ENSCPOG00000009965	POLR1E	100	83.971	ENSPTRG00000020944	POLR1E	99	83.971	Pan_troglodytes
ENSCPOG00000009965	POLR1E	100	83.971	ENSPANG00000025563	POLR1E	99	83.971	Papio_anubis
ENSCPOG00000009965	POLR1E	100	46.698	ENSPKIG00000003562	polr1e	99	46.698	Paramormyrops_kingsleyae
ENSCPOG00000009965	POLR1E	95	62.469	ENSPSIG00000003274	POLR1E	92	62.469	Pelodiscus_sinensis
ENSCPOG00000009965	POLR1E	94	45.980	ENSPMGG00000024169	polr1e	96	45.980	Periophthalmus_magnuspinnatus
ENSCPOG00000009965	POLR1E	100	68.258	ENSPEMG00000022300	-	96	68.258	Peromyscus_maniculatus_bairdii
ENSCPOG00000009965	POLR1E	100	83.493	ENSPEMG00000019151	-	96	83.493	Peromyscus_maniculatus_bairdii
ENSCPOG00000009965	POLR1E	95	74.495	ENSPCIG00000014798	POLR1E	97	74.495	Phascolarctos_cinereus
ENSCPOG00000009965	POLR1E	97	43.151	ENSPFOG00000019627	polr1e	97	43.151	Poecilia_formosa
ENSCPOG00000009965	POLR1E	98	44.762	ENSPLAG00000022679	polr1e	98	45.169	Poecilia_latipinna
ENSCPOG00000009965	POLR1E	85	44.809	ENSPMEG00000022123	polr1e	93	44.809	Poecilia_mexicana
ENSCPOG00000009965	POLR1E	97	44.928	ENSPREG00000009470	polr1e	98	44.928	Poecilia_reticulata
ENSCPOG00000009965	POLR1E	100	83.493	ENSPPYG00000019061	POLR1E	99	83.493	Pongo_abelii
ENSCPOG00000009965	POLR1E	56	84.255	ENSPCAG00000004891	POLR1E	77	84.255	Procavia_capensis
ENSCPOG00000009965	POLR1E	100	84.689	ENSPCOG00000027448	POLR1E	99	84.689	Propithecus_coquereli
ENSCPOG00000009965	POLR1E	94	87.786	ENSPVAG00000007940	POLR1E	83	87.786	Pteropus_vampyrus
ENSCPOG00000009965	POLR1E	100	45.093	ENSPNYG00000001032	polr1e	99	45.093	Pundamilia_nyererei
ENSCPOG00000009965	POLR1E	98	43.066	ENSPNAG00000006987	polr1e	99	43.066	Pygocentrus_nattereri
ENSCPOG00000009965	POLR1E	99	83.614	ENSRNOG00000012664	Polr1e	96	83.614	Rattus_norvegicus
ENSCPOG00000009965	POLR1E	97	81.931	ENSRBIG00000034214	POLR1E	99	83.421	Rhinopithecus_bieti
ENSCPOG00000009965	POLR1E	100	83.493	ENSRROG00000031986	POLR1E	99	83.493	Rhinopithecus_roxellana
ENSCPOG00000009965	POLR1E	100	82.775	ENSSBOG00000021415	POLR1E	99	82.775	Saimiri_boliviensis_boliviensis
ENSCPOG00000009965	POLR1E	86	71.031	ENSSHAG00000016084	POLR1E	99	71.031	Sarcophilus_harrisii
ENSCPOG00000009965	POLR1E	98	46.585	ENSSFOG00015002293	polr1e	98	46.585	Scleropages_formosus
ENSCPOG00000009965	POLR1E	100	46.370	ENSSMAG00000011672	polr1e	94	46.370	Scophthalmus_maximus
ENSCPOG00000009965	POLR1E	97	46.944	ENSSDUG00000022279	polr1e	97	46.944	Seriola_dumerili
ENSCPOG00000009965	POLR1E	97	46.699	ENSSLDG00000024918	polr1e	97	46.699	Seriola_lalandi_dorsalis
ENSCPOG00000009965	POLR1E	64	72.414	ENSSARG00000009810	-	67	72.414	Sorex_araneus
ENSCPOG00000009965	POLR1E	98	65.777	ENSSPUG00000009499	POLR1E	99	65.777	Sphenodon_punctatus
ENSCPOG00000009965	POLR1E	98	46.135	ENSSPAG00000021240	polr1e	99	46.135	Stegastes_partitus
ENSCPOG00000009965	POLR1E	100	86.842	ENSSSCG00000005347	POLR1E	99	86.842	Sus_scrofa
ENSCPOG00000009965	POLR1E	94	52.822	ENSTGUG00000007169	POLR1E	99	52.822	Taeniopygia_guttata
ENSCPOG00000009965	POLR1E	98	42.891	ENSTRUG00000020779	polr1e	99	43.669	Takifugu_rubripes
ENSCPOG00000009965	POLR1E	97	44.254	ENSTNIG00000017812	polr1e	98	44.254	Tetraodon_nigroviridis
ENSCPOG00000009965	POLR1E	94	87.277	ENSTBEG00000013786	POLR1E	84	87.277	Tupaia_belangeri
ENSCPOG00000009965	POLR1E	94	86.869	ENSTTRG00000008294	POLR1E	84	86.869	Tursiops_truncatus
ENSCPOG00000009965	POLR1E	100	86.842	ENSUAMG00000012474	POLR1E	100	88.283	Ursus_americanus
ENSCPOG00000009965	POLR1E	100	86.842	ENSUMAG00000011496	POLR1E	99	86.842	Ursus_maritimus
ENSCPOG00000009965	POLR1E	82	81.232	ENSVPAG00000009048	POLR1E	81	81.232	Vicugna_pacos
ENSCPOG00000009965	POLR1E	100	87.081	ENSVVUG00000019954	POLR1E	99	87.081	Vulpes_vulpes
ENSCPOG00000009965	POLR1E	98	52.058	ENSXETG00000006533	polr1e	99	52.058	Xenopus_tropicalis
ENSCPOG00000009965	POLR1E	97	44.608	ENSXCOG00000013706	polr1e	98	44.608	Xiphophorus_couchianus
ENSCPOG00000009965	POLR1E	97	45.588	ENSXMAG00000012484	polr1e	98	45.588	Xiphophorus_maculatus