EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000010143 (Gene tree)
Gene ID: -
Gene Symbol: GTF3A
Alias: AP2|TFIIIA
Full Name: general transcription factor IIIA
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 9110 bases
Position: chrDS562861.1:29127620-29136729
Accession: 100730669
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	1	7
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	2	7
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	3	7
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	4	7
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	5	7
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	6	7
ENSCPOP00000009108	zf-C2H2	PF00096.26	1.7e-35	7	7
ENSCPOP00000009108	zf-met	PF12874.7	6.9e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000010236	GTF3A-201	993	XM_013140901	ENSCPOP00000009108	330 (aa)	XP_012996355	H0VG83

Gene Model

Click here to download ENSCPOG00000010143's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010143's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000010143	GTF3A	79	36.364	ENSCPOG00000000634	ZFP1	63	36.364
ENSCPOG00000010143	GTF3A	79	38.916	ENSCPOG00000036704	-	50	38.916
ENSCPOG00000010143	GTF3A	82	39.506	ENSCPOG00000035563	-	74	39.506
ENSCPOG00000010143	GTF3A	81	35.678	ENSCPOG00000040740	ZNF226	70	35.678
ENSCPOG00000010143	GTF3A	89	34.579	ENSCPOG00000000780	ZNF574	60	34.711
ENSCPOG00000010143	GTF3A	79	37.209	ENSCPOG00000012883	PRDM5	79	37.037
ENSCPOG00000010143	GTF3A	81	37.647	ENSCPOG00000035126	ZNF2	59	35.510
ENSCPOG00000010143	GTF3A	79	39.431	ENSCPOG00000033345	-	90	39.271
ENSCPOG00000010143	GTF3A	83	38.926	ENSCPOG00000031196	ZNF81	64	38.926
ENSCPOG00000010143	GTF3A	79	34.717	ENSCPOG00000032242	-	57	35.789
ENSCPOG00000010143	GTF3A	81	33.929	ENSCPOG00000003954	ZNF317	64	35.443
ENSCPOG00000010143	GTF3A	86	36.508	ENSCPOG00000040579	ZNF865	69	31.250
ENSCPOG00000010143	GTF3A	91	32.836	ENSCPOG00000034791	-	71	33.210
ENSCPOG00000010143	GTF3A	86	38.732	ENSCPOG00000039731	ZNF235	70	38.732
ENSCPOG00000010143	GTF3A	82	40.000	ENSCPOG00000005238	ZNF768	52	40.741
ENSCPOG00000010143	GTF3A	81	34.940	ENSCPOG00000002374	ZIC3	70	34.940
ENSCPOG00000010143	GTF3A	81	32.895	ENSCPOG00000027176	PRDM14	53	32.667
ENSCPOG00000010143	GTF3A	87	35.573	ENSCPOG00000034004	-	77	38.462
ENSCPOG00000010143	GTF3A	83	43.023	ENSCPOG00000008424	ZNF236	59	43.023

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010143	GTF3A	98	85.855	ENSAMEG00000015824	GTF3A	91	81.571	Ailuropoda_melanoleuca
ENSCPOG00000010143	GTF3A	99	79.268	ENSBTAG00000012600	GTF3A	91	78.963	Bos_taurus
ENSCPOG00000010143	GTF3A	99	82.067	ENSCAFG00000006794	GTF3A	90	81.155	Canis_familiaris
ENSCPOG00000010143	GTF3A	99	79.573	ENSCHIG00000010341	-	91	78.659	Capra_hircus
ENSCPOG00000010143	GTF3A	99	79.573	ENSCHIG00000021040	-	77	78.659	Capra_hircus
ENSCPOG00000010143	GTF3A	89	84.364	ENSTSYG00000004206	GTF3A	87	80.822	Carlito_syrichta
ENSCPOG00000010143	GTF3A	89	99.225	ENSCAPG00000015862	GTF3A	100	99.225	Cavia_aperea
ENSCPOG00000010143	GTF3A	98	88.889	ENSCLAG00000003912	GTF3A	99	88.889	Chinchilla_lanigera
ENSCPOG00000010143	GTF3A	98	81.967	ENSDNOG00000037405	-	78	78.614	Dasypus_novemcinctus
ENSCPOG00000010143	GTF3A	95	82.123	ENSETEG00000003225	GTF3A	63	82.123	Echinops_telfairi
ENSCPOG00000010143	GTF3A	98	71.692	ENSEASG00005013216	-	86	71.692	Equus_asinus_asinus
ENSCPOG00000010143	GTF3A	98	84.868	ENSEASG00005022495	-	74	80.665	Equus_asinus_asinus
ENSCPOG00000010143	GTF3A	95	70.809	ENSECAG00000024825	-	64	82.971	Equus_caballus
ENSCPOG00000010143	GTF3A	98	85.526	ENSECAG00000014803	GTF3A	77	82.576	Equus_caballus
ENSCPOG00000010143	GTF3A	92	82.508	ENSEEUG00000004307	GTF3A	81	79.268	Erinaceus_europaeus
ENSCPOG00000010143	GTF3A	98	86.538	ENSFCAG00000006982	GTF3A	72	85.897	Felis_catus
ENSCPOG00000010143	GTF3A	99	86.890	ENSFDAG00000016841	GTF3A	100	86.890	Fukomys_damarensis
ENSCPOG00000010143	GTF3A	97	88.785	ENSHGLG00000004173	GTF3A	99	88.785	Heterocephalus_glaber_female
ENSCPOG00000010143	GTF3A	97	88.785	ENSHGLG00100011561	GTF3A	99	88.785	Heterocephalus_glaber_male
ENSCPOG00000010143	GTF3A	98	87.540	ENSSTOG00000013853	GTF3A	100	87.540	Ictidomys_tridecemlineatus
ENSCPOG00000010143	GTF3A	87	83.264	ENSJJAG00000011501	Gtf3a	89	83.264	Jaculus_jaculus
ENSCPOG00000010143	GTF3A	98	77.673	ENSLAFG00000027315	GTF3A	91	73.810	Loxodonta_africana
ENSCPOG00000010143	GTF3A	98	81.410	ENSMAUG00000016253	Gtf3a	89	77.039	Mesocricetus_auratus
ENSCPOG00000010143	GTF3A	98	84.211	ENSMICG00000014763	GTF3A	89	80.967	Microcebus_murinus
ENSCPOG00000010143	GTF3A	98	82.043	MGP_CAROLIEiJ_G0028031	Gtf3a	94	81.115	Mus_caroli
ENSCPOG00000010143	GTF3A	98	81.734	ENSMUSG00000016503	Gtf3a	94	80.805	Mus_musculus
ENSCPOG00000010143	GTF3A	99	80.428	MGP_PahariEiJ_G0024597	Gtf3a	95	79.511	Mus_pahari
ENSCPOG00000010143	GTF3A	98	81.734	MGP_SPRETEiJ_G0029029	Gtf3a	94	80.805	Mus_spretus
ENSCPOG00000010143	GTF3A	98	86.513	ENSMPUG00000005835	GTF3A	89	82.477	Mustela_putorius_furo
ENSCPOG00000010143	GTF3A	98	82.569	ENSMLUG00000002158	GTF3A	98	81.651	Myotis_lucifugus
ENSCPOG00000010143	GTF3A	92	86.513	ENSNLEG00000000331	GTF3A	96	79.558	Nomascus_leucogenys
ENSCPOG00000010143	GTF3A	89	56.522	ENSMEUG00000010089	GTF3A	88	56.902	Notamacropus_eugenii
ENSCPOG00000010143	GTF3A	99	73.171	ENSOPRG00000000854	-	82	72.561	Ochotona_princeps
ENSCPOG00000010143	GTF3A	99	86.667	ENSODEG00000006725	GTF3A	78	86.405	Octodon_degus
ENSCPOG00000010143	GTF3A	99	81.402	ENSOCUG00000011713	GTF3A	75	81.098	Oryctolagus_cuniculus
ENSCPOG00000010143	GTF3A	98	84.539	ENSOGAG00000014589	GTF3A	90	80.967	Otolemur_garnettii
ENSCPOG00000010143	GTF3A	99	74.085	ENSOARG00000012551	GTF3A	90	73.171	Ovis_aries
ENSCPOG00000010143	GTF3A	99	84.242	ENSPPRG00000002368	GTF3A	91	82.779	Panthera_pardus
ENSCPOG00000010143	GTF3A	88	83.650	ENSPTIG00000018958	GTF3A	72	83.650	Panthera_tigris_altaica
ENSCPOG00000010143	GTF3A	87	50.655	ENSPSIG00000011722	GTF3A	84	50.655	Pelodiscus_sinensis
ENSCPOG00000010143	GTF3A	90	86.577	ENSPPYG00000005235	GTF3A	90	83.077	Pongo_abelii
ENSCPOG00000010143	GTF3A	98	83.279	ENSPCOG00000016742	GTF3A	70	83.333	Propithecus_coquereli
ENSCPOG00000010143	GTF3A	98	82.484	ENSPVAG00000012837	GTF3A	74	81.847	Pteropus_vampyrus
ENSCPOG00000010143	GTF3A	98	78.289	ENSRROG00000043264	GTF3A	90	75.529	Rhinopithecus_roxellana
ENSCPOG00000010143	GTF3A	89	77.258	ENSSHAG00000016965	GTF3A	85	77.778	Sarcophilus_harrisii
ENSCPOG00000010143	GTF3A	94	75.884	ENSSARG00000010692	GTF3A	86	75.884	Sorex_araneus
ENSCPOG00000010143	GTF3A	83	73.551	ENSSPUG00000005307	GTF3A	73	73.723	Sphenodon_punctatus
ENSCPOG00000010143	GTF3A	88	45.704	ENSTRUG00000005241	gtf3ab	84	45.791	Takifugu_rubripes
ENSCPOG00000010143	GTF3A	87	86.531	ENSTBEG00000012075	GTF3A	58	86.531	Tupaia_belangeri
ENSCPOG00000010143	GTF3A	95	79.167	ENSTTRG00000008538	GTF3A	80	75.227	Tursiops_truncatus
ENSCPOG00000010143	GTF3A	98	86.842	ENSUAMG00000019189	GTF3A	91	82.477	Ursus_americanus
ENSCPOG00000010143	GTF3A	92	85.479	ENSUMAG00000016941	GTF3A	100	84.488	Ursus_maritimus
ENSCPOG00000010143	GTF3A	87	86.498	ENSVPAG00000004995	GTF3A	88	82.197	Vicugna_pacos
ENSCPOG00000010143	GTF3A	99	81.155	ENSVVUG00000009197	GTF3A	90	80.243	Vulpes_vulpes