EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000010263 (Gene tree)
Gene ID: 100729646
Gene Symbol: -
Alias: -
Full Name: non-POU domain containing octamer binding
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 9489 bases
Position: chrDS562881.1:25947712-25957200
Accession: 100729646
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000009216	RRM_1	PF00076.22	1.6e-31	1	2
ENSCPOP00000009216	RRM_1	PF00076.22	1.6e-31	2	2

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000010357	-	1449	XM_003470999	ENSCPOP00000009216	482 (aa)	XP_003471047	H0VGH4

Gene Model

Click here to download ENSCPOG00000010263's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010263's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000010263	-	80	91.495	ENSCPOG00000036719	-	93	91.495
ENSCPOG00000010263	-	100	89.627	ENSCPOG00000038668	-	100	88.589
ENSCPOG00000010263	-	100	71.694	ENSCPOG00000026604	-	99	70.868
ENSCPOG00000010263	-	75	69.613	ENSCPOG00000000395	PSPC1	91	59.072
ENSCPOG00000010263	-	100	97.113	ENSCPOG00000023605	-	100	97.113

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010263	-	100	96.473	ENSG00000147140	NONO	100	99.738	Homo_sapiens
ENSCPOG00000010263	-	95	62.527	ENSAPOG00000023320	nono	95	64.612	Acanthochromis_polyacanthus
ENSCPOG00000010263	-	100	96.680	ENSAMEG00000016057	NONO	100	96.680	Ailuropoda_melanoleuca
ENSCPOG00000010263	-	77	74.133	ENSACIG00000019987	nono	94	66.897	Amphilophus_citrinellus
ENSCPOG00000010263	-	95	62.092	ENSAOCG00000018863	nono	95	63.908	Amphiprion_ocellaris
ENSCPOG00000010263	-	76	72.404	ENSAPEG00000011383	nono	87	73.803	Amphiprion_percula
ENSCPOG00000010263	-	87	88.863	ENSAPLG00000002642	NONO	98	88.863	Anas_platyrhynchos
ENSCPOG00000010263	-	100	81.405	ENSACAG00000015026	NONO	99	82.231	Anolis_carolinensis
ENSCPOG00000010263	-	82	73.737	ENSANAG00000035751	-	96	85.714	Aotus_nancymaae
ENSCPOG00000010263	-	99	76.141	ENSANAG00000027089	-	99	76.349	Aotus_nancymaae
ENSCPOG00000010263	-	100	96.473	ENSANAG00000033266	-	100	96.473	Aotus_nancymaae
ENSCPOG00000010263	-	70	77.259	ENSACLG00000012045	nono	91	77.259	Astatotilapia_calliptera
ENSCPOG00000010263	-	98	63.368	ENSAMXG00000033933	nono	91	64.747	Astyanax_mexicanus
ENSCPOG00000010263	-	100	96.473	ENSBTAG00000012152	NONO	100	96.473	Bos_taurus
ENSCPOG00000010263	-	100	96.473	ENSCJAG00000036744	NONO	100	96.473	Callithrix_jacchus
ENSCPOG00000010263	-	100	96.680	ENSCAFG00000017071	NONO	100	96.680	Canis_familiaris
ENSCPOG00000010263	-	91	84.211	ENSCAFG00000030809	-	99	83.982	Canis_familiaris
ENSCPOG00000010263	-	85	85.393	ENSCAFG00000013766	-	100	85.393	Canis_familiaris
ENSCPOG00000010263	-	100	95.436	ENSCAFG00000003207	-	100	95.436	Canis_familiaris
ENSCPOG00000010263	-	100	93.983	ENSCAFG00020020298	-	100	93.983	Canis_lupus_dingo
ENSCPOG00000010263	-	77	90.270	ENSCHIG00000009602	-	89	90.270	Capra_hircus
ENSCPOG00000010263	-	100	96.473	ENSCHIG00000000365	-	100	96.473	Capra_hircus
ENSCPOG00000010263	-	100	92.946	ENSTSYG00000007423	-	99	92.946	Carlito_syrichta
ENSCPOG00000010263	-	99	86.279	ENSTSYG00000036306	-	100	86.486	Carlito_syrichta
ENSCPOG00000010263	-	100	80.705	ENSTSYG00000034207	-	99	82.780	Carlito_syrichta
ENSCPOG00000010263	-	99	80.563	ENSCAPG00000006522	-	84	80.056	Cavia_aperea
ENSCPOG00000010263	-	99	72.234	ENSCAPG00000002354	-	97	71.399	Cavia_aperea
ENSCPOG00000010263	-	100	69.295	ENSCAPG00000002723	-	100	69.087	Cavia_aperea
ENSCPOG00000010263	-	100	98.963	ENSCAPG00000011616	-	100	98.963	Cavia_aperea
ENSCPOG00000010263	-	100	87.137	ENSCATG00000039509	NONO	100	87.137	Cercocebus_atys
ENSCPOG00000010263	-	100	97.510	ENSCLAG00000003642	NONO	100	97.510	Chinchilla_lanigera
ENSCPOG00000010263	-	100	82.961	ENSCPBG00000016659	NONO	100	82.556	Chrysemys_picta_bellii
ENSCPOG00000010263	-	100	96.473	ENSCANG00000025310	NONO	100	96.473	Colobus_angolensis_palliatus
ENSCPOG00000010263	-	100	96.266	ENSCGRG00001000065	Nono	100	96.266	Cricetulus_griseus_chok1gshd
ENSCPOG00000010263	-	87	99.045	ENSCGRG00000004508	Nono	100	99.045	Cricetulus_griseus_crigri
ENSCPOG00000010263	-	75	73.913	ENSCSEG00000010708	nono	90	65.446	Cynoglossus_semilaevis
ENSCPOG00000010263	-	75	73.842	ENSCSEG00000008189	NONO	94	65.217	Cynoglossus_semilaevis
ENSCPOG00000010263	-	74	73.352	ENSCVAG00000003978	nono	82	73.278	Cyprinodon_variegatus
ENSCPOG00000010263	-	90	65.148	ENSDARG00000020482	nono	87	73.451	Danio_rerio
ENSCPOG00000010263	-	62	71.141	ENSDNOG00000032215	-	99	71.186	Dasypus_novemcinctus
ENSCPOG00000010263	-	54	82.609	ENSDNOG00000031430	-	100	82.609	Dasypus_novemcinctus
ENSCPOG00000010263	-	100	95.436	ENSDORG00000009294	Nono	100	95.436	Dipodomys_ordii
ENSCPOG00000010263	-	87	99.437	ENSETEG00000013823	NONO	77	99.437	Echinops_telfairi
ENSCPOG00000010263	-	100	96.680	ENSECAG00000008502	NONO	100	96.680	Equus_caballus
ENSCPOG00000010263	-	100	95.436	ENSEEUG00000014404	NONO	100	95.436	Erinaceus_europaeus
ENSCPOG00000010263	-	98	64.167	ENSELUG00000001083	nono	93	67.117	Esox_lucius
ENSCPOG00000010263	-	100	96.680	ENSFCAG00000043511	-	100	96.680	Felis_catus
ENSCPOG00000010263	-	100	73.760	ENSFALG00000011765	NONO	100	72.934	Ficedula_albicollis
ENSCPOG00000010263	-	100	96.680	ENSFDAG00000012809	-	100	96.680	Fukomys_damarensis
ENSCPOG00000010263	-	100	78.484	ENSFDAG00000006143	-	100	78.279	Fukomys_damarensis
ENSCPOG00000010263	-	72	73.729	ENSFHEG00000009714	nono	85	72.176	Fundulus_heteroclitus
ENSCPOG00000010263	-	100	82.150	ENSGALG00000005507	NONO	100	82.150	Gallus_gallus
ENSCPOG00000010263	-	74	74.444	ENSGAFG00000011460	nono	83	74.105	Gambusia_affinis
ENSCPOG00000010263	-	83	68.059	ENSGACG00000011824	nono	94	65.297	Gasterosteus_aculeatus
ENSCPOG00000010263	-	100	84.711	ENSGAGG00000025400	-	91	84.298	Gopherus_agassizii
ENSCPOG00000010263	-	100	84.440	ENSGGOG00000036327	-	99	84.232	Gorilla_gorilla
ENSCPOG00000010263	-	91	96.128	ENSGGOG00000006194	NONO	97	96.128	Gorilla_gorilla
ENSCPOG00000010263	-	77	74.400	ENSHBUG00000010741	nono	94	66.897	Haplochromis_burtoni
ENSCPOG00000010263	-	100	96.888	ENSHGLG00000005550	NONO	100	96.888	Heterocephalus_glaber_female
ENSCPOG00000010263	-	100	96.888	ENSHGLG00100013511	NONO	100	96.888	Heterocephalus_glaber_male
ENSCPOG00000010263	-	82	70.750	ENSHCOG00000016441	nono	84	76.554	Hippocampus_comes
ENSCPOG00000010263	-	79	70.663	ENSIPUG00000018271	nono	91	63.488	Ictalurus_punctatus
ENSCPOG00000010263	-	100	96.680	ENSSTOG00000015869	NONO	100	96.680	Ictidomys_tridecemlineatus
ENSCPOG00000010263	-	100	95.643	ENSJJAG00000017151	-	100	95.643	Jaculus_jaculus
ENSCPOG00000010263	-	100	76.141	ENSJJAG00000001971	-	100	75.104	Jaculus_jaculus
ENSCPOG00000010263	-	91	63.801	ENSKMAG00000002798	nono	82	72.727	Kryptolebias_marmoratus
ENSCPOG00000010263	-	81	71.139	ENSLBEG00000022623	nono	84	74.792	Labrus_bergylta
ENSCPOG00000010263	-	81	77.296	ENSLACG00000000598	NONO	84	83.569	Latimeria_chalumnae
ENSCPOG00000010263	-	100	65.784	ENSLOCG00000014739	nono	93	70.748	Lepisosteus_oculatus
ENSCPOG00000010263	-	100	96.888	ENSLAFG00000013422	NONO	100	96.888	Loxodonta_africana
ENSCPOG00000010263	-	100	96.473	ENSMFAG00000041557	NONO	100	96.473	Macaca_fascicularis
ENSCPOG00000010263	-	79	99.738	ENSMMUG00000020481	NONO	100	99.738	Macaca_mulatta
ENSCPOG00000010263	-	100	96.473	ENSMNEG00000009698	NONO	100	96.473	Macaca_nemestrina
ENSCPOG00000010263	-	100	96.473	ENSMLEG00000042452	NONO	100	96.473	Mandrillus_leucophaeus
ENSCPOG00000010263	-	95	63.715	ENSMAMG00000007314	nono	94	65.675	Mastacembelus_armatus
ENSCPOG00000010263	-	70	77.259	ENSMZEG00005010199	nono	91	77.259	Maylandia_zebra
ENSCPOG00000010263	-	87	89.100	ENSMGAG00000008869	NONO	98	89.100	Meleagris_gallopavo
ENSCPOG00000010263	-	100	96.473	ENSMAUG00000016243	Nono	100	96.473	Mesocricetus_auratus
ENSCPOG00000010263	-	100	96.266	ENSMICG00000000232	NONO	100	96.266	Microcebus_murinus
ENSCPOG00000010263	-	100	80.705	ENSMOCG00000021293	-	100	82.780	Microtus_ochrogaster
ENSCPOG00000010263	-	100	76.971	ENSMOCG00000020099	-	95	76.971	Microtus_ochrogaster
ENSCPOG00000010263	-	95	96.491	ENSMOCG00000005532	-	100	96.491	Microtus_ochrogaster
ENSCPOG00000010263	-	83	69.042	ENSMMOG00000015503	nono	85	66.820	Mola_mola
ENSCPOG00000010263	-	90	92.396	ENSMODG00000004445	NONO	99	92.343	Monodelphis_domestica
ENSCPOG00000010263	-	77	71.429	ENSMALG00000001310	nono	87	73.003	Monopterus_albus
ENSCPOG00000010263	-	100	96.680	ENSMUSG00000031311	Nono	100	96.680	Mus_musculus
ENSCPOG00000010263	-	100	96.680	MGP_PahariEiJ_G0031826	Nono	100	96.680	Mus_pahari
ENSCPOG00000010263	-	100	96.680	ENSMPUG00000004937	NONO	100	96.680	Mustela_putorius_furo
ENSCPOG00000010263	-	100	96.058	ENSMLUG00000002489	NONO	89	96.058	Myotis_lucifugus
ENSCPOG00000010263	-	100	96.058	ENSNGAG00000010857	Nono	100	96.058	Nannospalax_galili
ENSCPOG00000010263	-	77	74.667	ENSNBRG00000017083	nono	94	67.126	Neolamprologus_brichardi
ENSCPOG00000010263	-	100	93.568	ENSNLEG00000001278	NONO	100	99.738	Nomascus_leucogenys
ENSCPOG00000010263	-	100	81.950	ENSMEUG00000004294	NONO	100	81.950	Notamacropus_eugenii
ENSCPOG00000010263	-	58	100.000	ENSOPRG00000001139	-	69	100.000	Ochotona_princeps
ENSCPOG00000010263	-	87	70.952	ENSODEG00000011878	-	100	65.768	Octodon_degus
ENSCPOG00000010263	-	100	89.212	ENSODEG00000002994	-	100	89.212	Octodon_degus
ENSCPOG00000010263	-	100	90.249	ENSODEG00000002224	-	100	89.834	Octodon_degus
ENSCPOG00000010263	-	97	66.738	ENSODEG00000004982	-	99	64.316	Octodon_degus
ENSCPOG00000010263	-	89	67.916	ENSODEG00000000530	-	89	67.749	Octodon_degus
ENSCPOG00000010263	-	77	74.400	ENSONIG00000020497	nono	94	66.897	Oreochromis_niloticus
ENSCPOG00000010263	-	99	90.456	ENSOCUG00000021848	-	90	98.829	Oryctolagus_cuniculus
ENSCPOG00000010263	-	99	58.700	ENSOCUG00000024801	-	97	59.119	Oryctolagus_cuniculus
ENSCPOG00000010263	-	86	65.394	ENSORLG00000012801	nono	83	71.625	Oryzias_latipes
ENSCPOG00000010263	-	72	74.277	ENSORLG00020003761	nono	78	74.277	Oryzias_latipes_hni
ENSCPOG00000010263	-	86	65.394	ENSORLG00015018033	nono	83	71.625	Oryzias_latipes_hsok
ENSCPOG00000010263	-	86	64.775	ENSOMEG00000012702	nono	82	73.333	Oryzias_melastigma
ENSCPOG00000010263	-	100	96.273	ENSOGAG00000004834	NONO	100	96.273	Otolemur_garnettii
ENSCPOG00000010263	-	100	96.266	ENSOARG00000016966	NONO	99	96.266	Ovis_aries
ENSCPOG00000010263	-	100	96.473	ENSPPAG00000032487	NONO	100	96.473	Pan_paniscus
ENSCPOG00000010263	-	100	85.685	ENSPPAG00000041394	-	99	85.685	Pan_paniscus
ENSCPOG00000010263	-	100	96.680	ENSPPRG00000024537	-	100	96.680	Panthera_pardus
ENSCPOG00000010263	-	100	96.473	ENSPTIG00000016068	-	100	96.473	Panthera_tigris_altaica
ENSCPOG00000010263	-	100	96.473	ENSPTRG00000022010	NONO	100	96.473	Pan_troglodytes
ENSCPOG00000010263	-	100	85.477	ENSPTRG00000051228	-	100	85.477	Pan_troglodytes
ENSCPOG00000010263	-	100	70.183	ENSPANG00000035017	-	99	69.574	Papio_anubis
ENSCPOG00000010263	-	100	96.473	ENSPANG00000013979	NONO	100	96.473	Papio_anubis
ENSCPOG00000010263	-	89	68.664	ENSPKIG00000014500	nono	93	69.655	Paramormyrops_kingsleyae
ENSCPOG00000010263	-	91	62.031	ENSPKIG00000019475	-	91	78.090	Paramormyrops_kingsleyae
ENSCPOG00000010263	-	100	84.298	ENSPSIG00000010678	NONO	99	84.091	Pelodiscus_sinensis
ENSCPOG00000010263	-	85	65.385	ENSPMGG00000023030	nono	82	72.727	Periophthalmus_magnuspinnatus
ENSCPOG00000010263	-	100	96.266	ENSPEMG00000011150	Nono	100	96.266	Peromyscus_maniculatus_bairdii
ENSCPOG00000010263	-	100	86.542	ENSPCIG00000026515	NONO	100	86.542	Phascolarctos_cinereus
ENSCPOG00000010263	-	74	68.333	ENSPFOG00000016436	nono	82	67.769	Poecilia_formosa
ENSCPOG00000010263	-	74	73.056	ENSPLAG00000017492	nono	82	72.727	Poecilia_latipinna
ENSCPOG00000010263	-	77	71.088	ENSPMEG00000021530	nono	83	73.003	Poecilia_mexicana
ENSCPOG00000010263	-	85	67.726	ENSPREG00000010014	nono	82	73.554	Poecilia_reticulata
ENSCPOG00000010263	-	100	96.058	ENSPPYG00000020451	NONO	100	96.058	Pongo_abelii
ENSCPOG00000010263	-	100	97.095	ENSPCAG00000002541	NONO	100	97.095	Procavia_capensis
ENSCPOG00000010263	-	100	96.680	ENSPCOG00000008197	NONO	100	96.680	Propithecus_coquereli
ENSCPOG00000010263	-	100	95.643	ENSPVAG00000016503	NONO	100	95.643	Pteropus_vampyrus
ENSCPOG00000010263	-	95	63.090	ENSPNAG00000008232	nono	82	63.387	Pygocentrus_nattereri
ENSCPOG00000010263	-	100	96.680	ENSRNOG00000003689	Nono	100	96.680	Rattus_norvegicus
ENSCPOG00000010263	-	76	99.727	ENSRBIG00000037966	NONO	100	99.727	Rhinopithecus_bieti
ENSCPOG00000010263	-	100	96.266	ENSRROG00000043203	NONO	100	96.266	Rhinopithecus_roxellana
ENSCPOG00000010263	-	100	92.739	ENSSBOG00000027683	-	99	92.739	Saimiri_boliviensis_boliviensis
ENSCPOG00000010263	-	100	96.266	ENSSBOG00000032772	-	100	96.266	Saimiri_boliviensis_boliviensis
ENSCPOG00000010263	-	99	73.760	ENSSBOG00000018932	-	99	73.760	Saimiri_boliviensis_boliviensis
ENSCPOG00000010263	-	100	89.212	ENSSHAG00000010195	NONO	100	89.212	Sarcophilus_harrisii
ENSCPOG00000010263	-	95	59.871	ENSSFOG00015000137	-	76	77.083	Scleropages_formosus
ENSCPOG00000010263	-	89	69.635	ENSSFOG00015008964	nono	90	80.308	Scleropages_formosus
ENSCPOG00000010263	-	95	62.716	ENSSDUG00000021886	nono	94	65.297	Seriola_dumerili
ENSCPOG00000010263	-	95	62.716	ENSSLDG00000012392	nono	94	65.297	Seriola_lalandi_dorsalis
ENSCPOG00000010263	-	100	89.419	ENSSARG00000007959	NONO	100	80.739	Sorex_araneus
ENSCPOG00000010263	-	79	87.240	ENSSPUG00000003116	NONO	100	87.240	Sphenodon_punctatus
ENSCPOG00000010263	-	95	62.963	ENSSPAG00000012663	nono	95	65.525	Stegastes_partitus
ENSCPOG00000010263	-	100	96.680	ENSSSCG00000023245	NONO	100	96.680	Sus_scrofa
ENSCPOG00000010263	-	100	83.299	ENSTGUG00000007048	NONO	100	82.680	Taeniopygia_guttata
ENSCPOG00000010263	-	78	72.775	ENSTRUG00000005554	nono	94	66.364	Takifugu_rubripes
ENSCPOG00000010263	-	100	96.680	ENSTTRG00000009605	NONO	100	96.680	Tursiops_truncatus
ENSCPOG00000010263	-	100	93.983	ENSUAMG00000008220	NONO	100	93.983	Ursus_americanus
ENSCPOG00000010263	-	100	96.680	ENSUMAG00000021550	NONO	100	96.680	Ursus_maritimus
ENSCPOG00000010263	-	100	96.680	ENSVPAG00000002272	NONO	100	96.680	Vicugna_pacos
ENSCPOG00000010263	-	100	91.753	ENSVVUG00000003390	-	100	91.753	Vulpes_vulpes
ENSCPOG00000010263	-	100	73.292	ENSXETG00000020868	nono	99	73.292	Xenopus_tropicalis
ENSCPOG00000010263	-	74	74.444	ENSXCOG00000015587	nono	83	74.105	Xiphophorus_couchianus
ENSCPOG00000010263	-	74	74.444	ENSXMAG00000019883	nono	83	74.105	Xiphophorus_maculatus