EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000010284 (Gene tree)
Gene ID: 100723957
Gene Symbol: -
Alias: -
Full Name: RNA binding motif protein 46
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 34011 bases
Position: chrDS562862.1:34942332-34976342
Accession: 100723957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000032469	DND1_DSRM	PF14709.7	7e-28	1	1
ENSCPOP00000025479	DND1_DSRM	PF14709.7	7.9e-28	1	1
ENSCPOP00000009234	DND1_DSRM	PF14709.7	9.9e-28	1	1
ENSCPOP00000032469	RRM_1	PF00076.22	9e-36	1	3
ENSCPOP00000032469	RRM_1	PF00076.22	9e-36	2	3
ENSCPOP00000032469	RRM_1	PF00076.22	9e-36	3	3
ENSCPOP00000025479	RRM_1	PF00076.22	1e-35	1	3
ENSCPOP00000025479	RRM_1	PF00076.22	1e-35	2	3
ENSCPOP00000025479	RRM_1	PF00076.22	1e-35	3	3
ENSCPOP00000009234	RRM_1	PF00076.22	1.5e-35	1	3
ENSCPOP00000009234	RRM_1	PF00076.22	1.5e-35	2	3
ENSCPOP00000009234	RRM_1	PF00076.22	1.5e-35	3	3

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000010378	-	1605	-	ENSCPOP00000009234	534 (aa)	-	H0VGJ1
ENSCPOT00000042699	-	1899	XM_005006803	ENSCPOP00000025479	485 (aa)	XP_005006860	A0A286XJ47
ENSCPOT00000045384	-	1413	-	ENSCPOP00000032469	470 (aa)	-	A0A286Y426

Gene Model

Click here to download ENSCPOG00000010284's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010284's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000010284	-	100	95.539	ENSCPOG00000019272	-	100	95.539
ENSCPOG00000010284	-	58	31.250	ENSCPOG00000008327	TIA1	71	31.429
ENSCPOG00000010284	-	64	73.000	ENSCPOG00000014100	RBM47	57	73.000
ENSCPOG00000010284	-	99	93.319	ENSCPOG00000020396	-	95	93.474
ENSCPOG00000010284	-	63	54.333	ENSCPOG00000012415	SYNCRIP	53	53.667
ENSCPOG00000010284	-	88	70.064	ENSCPOG00000009807	A1CF	73	70.064

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010284	-	100	96.170	ENSG00000151962	RBM46	100	99.248	Homo_sapiens
ENSCPOG00000010284	-	97	65.236	ENSAPOG00000009209	rbm46	91	64.756	Acanthochromis_polyacanthus
ENSCPOG00000010284	-	100	95.506	ENSAMEG00000013290	RBM46	100	95.506	Ailuropoda_melanoleuca
ENSCPOG00000010284	-	99	59.539	ENSACIG00000014500	rbm46	91	59.748	Amphilophus_citrinellus
ENSCPOG00000010284	-	95	65.919	ENSAOCG00000001892	-	99	59.962	Amphiprion_ocellaris
ENSCPOG00000010284	-	95	65.919	ENSAPEG00000017762	rbm46	97	65.919	Amphiprion_percula
ENSCPOG00000010284	-	97	63.755	ENSATEG00000010775	rbm46	98	59.160	Anabas_testudineus
ENSCPOG00000010284	-	99	86.938	ENSAPLG00000005116	RBM46	100	86.938	Anas_platyrhynchos
ENSCPOG00000010284	-	99	90.150	ENSACAG00000015599	RBM46	100	88.202	Anolis_carolinensis
ENSCPOG00000010284	-	100	95.319	ENSANAG00000029193	RBM46	100	95.319	Aotus_nancymaae
ENSCPOG00000010284	-	95	64.537	ENSACLG00000016153	rbm46	94	59.707	Astatotilapia_calliptera
ENSCPOG00000010284	-	96	66.075	ENSAMXG00000009397	rbm46	98	66.075	Astyanax_mexicanus
ENSCPOG00000010284	-	95	62.826	ENSAMXG00000020892	-	99	60.000	Astyanax_mexicanus
ENSCPOG00000010284	-	100	95.670	ENSBTAG00000001696	RBM46	100	95.670	Bos_taurus
ENSCPOG00000010284	-	100	95.106	ENSCJAG00000001768	RBM46	100	95.106	Callithrix_jacchus
ENSCPOG00000010284	-	100	96.701	ENSCAFG00000008473	RBM46	100	96.701	Canis_familiaris
ENSCPOG00000010284	-	100	96.067	ENSCAFG00020002468	RBM46	100	96.067	Canis_lupus_dingo
ENSCPOG00000010284	-	100	96.082	ENSCHIG00000000502	RBM46	100	96.082	Capra_hircus
ENSCPOG00000010284	-	100	95.258	ENSTSYG00000010435	RBM46	100	95.258	Carlito_syrichta
ENSCPOG00000010284	-	79	92.412	ENSCAPG00000011841	-	99	92.412	Cavia_aperea
ENSCPOG00000010284	-	100	100.000	ENSCAPG00000011928	-	100	100.000	Cavia_aperea
ENSCPOG00000010284	-	100	96.170	ENSCCAG00000027619	-	100	96.170	Cebus_capucinus
ENSCPOG00000010284	-	99	79.707	ENSCCAG00000001323	-	99	79.579	Cebus_capucinus
ENSCPOG00000010284	-	100	95.532	ENSCATG00000040148	RBM46	100	95.532	Cercocebus_atys
ENSCPOG00000010284	-	100	97.872	ENSCLAG00000005846	-	100	97.872	Chinchilla_lanigera
ENSCPOG00000010284	-	99	94.433	ENSCLAG00000011886	-	99	90.751	Chinchilla_lanigera
ENSCPOG00000010284	-	100	95.318	ENSCSAG00000003263	RBM46	100	95.318	Chlorocebus_sabaeus
ENSCPOG00000010284	-	99	95.289	ENSCHOG00000003429	RBM46	100	94.007	Choloepus_hoffmanni
ENSCPOG00000010284	-	95	92.809	ENSCPBG00000009314	RBM46	97	92.809	Chrysemys_picta_bellii
ENSCPOG00000010284	-	100	95.464	ENSCANG00000039065	RBM46	100	95.464	Colobus_angolensis_palliatus
ENSCPOG00000010284	-	100	96.082	ENSCGRG00001016714	Rbm46	100	96.082	Cricetulus_griseus_chok1gshd
ENSCPOG00000010284	-	100	96.082	ENSCGRG00000011738	Rbm46	100	96.082	Cricetulus_griseus_crigri
ENSCPOG00000010284	-	95	58.150	ENSCSEG00000005530	rbm46	96	58.150	Cynoglossus_semilaevis
ENSCPOG00000010284	-	98	62.851	ENSCVAG00000021013	rbm46	97	62.316	Cyprinodon_variegatus
ENSCPOG00000010284	-	96	66.811	ENSDARG00000079452	rbm46	99	63.048	Danio_rerio
ENSCPOG00000010284	-	100	95.318	ENSDNOG00000016195	RBM46	100	95.318	Dasypus_novemcinctus
ENSCPOG00000010284	-	100	96.170	ENSDORG00000006405	Rbm46	100	96.170	Dipodomys_ordii
ENSCPOG00000010284	-	99	94.647	ENSETEG00000014902	RBM46	100	91.011	Echinops_telfairi
ENSCPOG00000010284	-	100	94.007	ENSEASG00005015821	RBM46	100	94.007	Equus_asinus_asinus
ENSCPOG00000010284	-	100	94.845	ENSECAG00000007649	RBM46	100	94.845	Equus_caballus
ENSCPOG00000010284	-	100	92.135	ENSEEUG00000011824	RBM46	100	92.135	Erinaceus_europaeus
ENSCPOG00000010284	-	78	69.947	ENSELUG00000008166	rbm46	94	69.947	Esox_lucius
ENSCPOG00000010284	-	100	96.495	ENSFCAG00000029812	RBM46	100	96.495	Felis_catus
ENSCPOG00000010284	-	99	85.501	ENSFALG00000013157	RBM46	95	83.437	Ficedula_albicollis
ENSCPOG00000010284	-	100	94.757	ENSFDAG00000019281	-	100	94.757	Fukomys_damarensis
ENSCPOG00000010284	-	99	92.077	ENSFDAG00000006445	-	95	91.841	Fukomys_damarensis
ENSCPOG00000010284	-	84	61.558	ENSFHEG00000013257	rbm46	87	61.558	Fundulus_heteroclitus
ENSCPOG00000010284	-	99	79.274	ENSGALG00000009278	RBM46	100	78.481	Gallus_gallus
ENSCPOG00000010284	-	61	80.702	ENSGAFG00000020245	rbm46	89	80.139	Gambusia_affinis
ENSCPOG00000010284	-	99	92.719	ENSGAGG00000002019	RBM46	95	88.400	Gopherus_agassizii
ENSCPOG00000010284	-	100	95.957	ENSGGOG00000001876	RBM46	100	95.957	Gorilla_gorilla
ENSCPOG00000010284	-	95	61.298	ENSHBUG00000009609	rbm46	91	65.952	Haplochromis_burtoni
ENSCPOG00000010284	-	94	82.045	ENSHGLG00000010742	-	99	74.427	Heterocephalus_glaber_female
ENSCPOG00000010284	-	96	93.363	ENSHGLG00000002463	-	99	96.074	Heterocephalus_glaber_female
ENSCPOG00000010284	-	99	81.156	ENSHGLG00000002940	-	100	81.214	Heterocephalus_glaber_female
ENSCPOG00000010284	-	94	82.045	ENSHGLG00100004977	-	99	74.427	Heterocephalus_glaber_male
ENSCPOG00000010284	-	99	77.399	ENSHGLG00100018987	-	99	77.609	Heterocephalus_glaber_male
ENSCPOG00000010284	-	100	96.289	ENSHGLG00100012752	-	100	96.289	Heterocephalus_glaber_male
ENSCPOG00000010284	-	98	50.420	ENSHCOG00000012998	rbm46	94	50.420	Hippocampus_comes
ENSCPOG00000010284	-	99	66.320	ENSIPUG00000024038	rbm46	96	66.320	Ictalurus_punctatus
ENSCPOG00000010284	-	100	96.596	ENSSTOG00000007918	RBM46	100	96.596	Ictidomys_tridecemlineatus
ENSCPOG00000010284	-	100	93.830	ENSJJAG00000003902	Rbm46	100	93.830	Jaculus_jaculus
ENSCPOG00000010284	-	99	63.080	ENSKMAG00000015127	rbm46	100	58.640	Kryptolebias_marmoratus
ENSCPOG00000010284	-	99	88.009	ENSLACG00000002062	RBM46	100	86.355	Latimeria_chalumnae
ENSCPOG00000010284	-	96	76.000	ENSLOCG00000008298	rbm46	96	76.339	Lepisosteus_oculatus
ENSCPOG00000010284	-	99	95.940	ENSLAFG00000015448	RBM46	100	95.940	Loxodonta_africana
ENSCPOG00000010284	-	100	95.957	ENSMFAG00000043485	RBM46	100	95.957	Macaca_fascicularis
ENSCPOG00000010284	-	100	95.876	ENSMMUG00000021147	RBM46	100	95.876	Macaca_mulatta
ENSCPOG00000010284	-	100	95.957	ENSMNEG00000002787	RBM46	100	95.957	Macaca_nemestrina
ENSCPOG00000010284	-	100	95.319	ENSMLEG00000029756	RBM46	100	95.319	Mandrillus_leucophaeus
ENSCPOG00000010284	-	95	65.859	ENSMAMG00000009093	rbm46	96	62.525	Mastacembelus_armatus
ENSCPOG00000010284	-	95	64.588	ENSMZEG00005027849	rbm46	97	62.162	Maylandia_zebra
ENSCPOG00000010284	-	99	79.915	ENSMGAG00000001457	RBM46	99	79.915	Meleagris_gallopavo
ENSCPOG00000010284	-	100	96.082	ENSMAUG00000009911	Rbm46	100	96.082	Mesocricetus_auratus
ENSCPOG00000010284	-	100	95.745	ENSMICG00000042747	RBM46	100	95.745	Microcebus_murinus
ENSCPOG00000010284	-	100	96.082	ENSMOCG00000001188	Rbm46	100	96.082	Microtus_ochrogaster
ENSCPOG00000010284	-	96	62.963	ENSMMOG00000011214	rbm46	97	58.175	Mola_mola
ENSCPOG00000010284	-	99	95.717	ENSMODG00000001302	RBM46	100	86.815	Monodelphis_domestica
ENSCPOG00000010284	-	94	61.991	ENSMALG00000006185	rbm46	93	62.217	Monopterus_albus
ENSCPOG00000010284	-	100	96.495	MGP_CAROLIEiJ_G0025101	Rbm46	100	96.495	Mus_caroli
ENSCPOG00000010284	-	100	96.082	ENSMUSG00000033882	Rbm46	100	96.082	Mus_musculus
ENSCPOG00000010284	-	100	95.876	MGP_PahariEiJ_G0026544	Rbm46	100	95.876	Mus_pahari
ENSCPOG00000010284	-	100	95.876	MGP_SPRETEiJ_G0026043	Rbm46	100	95.876	Mus_spretus
ENSCPOG00000010284	-	100	96.495	ENSMPUG00000005670	RBM46	100	96.495	Mustela_putorius_furo
ENSCPOG00000010284	-	100	94.579	ENSMLUG00000003221	RBM46	100	94.579	Myotis_lucifugus
ENSCPOG00000010284	-	100	95.464	ENSNGAG00000004231	Rbm46	100	95.464	Nannospalax_galili
ENSCPOG00000010284	-	95	64.877	ENSNBRG00000000273	rbm46	84	64.877	Neolamprologus_brichardi
ENSCPOG00000010284	-	100	95.745	ENSNLEG00000006184	RBM46	100	95.745	Nomascus_leucogenys
ENSCPOG00000010284	-	89	95.673	ENSMEUG00000013328	RBM46	99	95.610	Notamacropus_eugenii
ENSCPOG00000010284	-	60	97.173	ENSOPRG00000007136	RBM46	100	97.173	Ochotona_princeps
ENSCPOG00000010284	-	100	96.170	ENSODEG00000000735	-	100	96.170	Octodon_degus
ENSCPOG00000010284	-	99	93.148	ENSODEG00000018002	-	93	93.096	Octodon_degus
ENSCPOG00000010284	-	95	65.188	ENSONIG00000014096	rbm46	96	65.188	Oreochromis_niloticus
ENSCPOG00000010284	-	99	88.462	ENSOANG00000002141	RBM46	100	86.008	Ornithorhynchus_anatinus
ENSCPOG00000010284	-	99	96.360	ENSOCUG00000017859	RBM46	100	95.318	Oryctolagus_cuniculus
ENSCPOG00000010284	-	99	61.277	ENSORLG00000002429	rbm46	97	56.987	Oryzias_latipes
ENSCPOG00000010284	-	99	61.359	ENSORLG00020022154	rbm46	97	57.274	Oryzias_latipes_hni
ENSCPOG00000010284	-	98	62.826	ENSORLG00015020234	rbm46	97	60.619	Oryzias_latipes_hsok
ENSCPOG00000010284	-	95	61.810	ENSOMEG00000022580	rbm46	99	58.317	Oryzias_melastigma
ENSCPOG00000010284	-	100	95.693	ENSOGAG00000005647	RBM46	100	95.693	Otolemur_garnettii
ENSCPOG00000010284	-	100	95.876	ENSOARG00000016406	RBM46	100	95.876	Ovis_aries
ENSCPOG00000010284	-	100	95.957	ENSPPAG00000043236	RBM46	100	95.957	Pan_paniscus
ENSCPOG00000010284	-	100	96.289	ENSPPRG00000009416	RBM46	100	96.289	Panthera_pardus
ENSCPOG00000010284	-	100	96.289	ENSPTIG00000017449	RBM46	100	96.289	Panthera_tigris_altaica
ENSCPOG00000010284	-	100	95.957	ENSPTRG00000016538	RBM46	100	95.957	Pan_troglodytes
ENSCPOG00000010284	-	100	95.957	ENSPANG00000004186	RBM46	100	95.957	Papio_anubis
ENSCPOG00000010284	-	99	69.742	ENSPKIG00000015334	rbm46	92	66.229	Paramormyrops_kingsleyae
ENSCPOG00000010284	-	100	92.979	ENSPSIG00000006429	RBM46	99	89.980	Pelodiscus_sinensis
ENSCPOG00000010284	-	95	81.273	ENSPMGG00000019872	rbm46	97	81.273	Periophthalmus_magnuspinnatus
ENSCPOG00000010284	-	100	96.082	ENSPEMG00000013899	Rbm46	100	96.082	Peromyscus_maniculatus_bairdii
ENSCPOG00000010284	-	100	95.464	ENSPCIG00000029626	RBM46	100	95.464	Phascolarctos_cinereus
ENSCPOG00000010284	-	85	78.644	ENSPFOG00000001079	rbm46	73	78.644	Poecilia_formosa
ENSCPOG00000010284	-	99	62.683	ENSPLAG00000004541	rbm46	98	57.398	Poecilia_latipinna
ENSCPOG00000010284	-	99	62.683	ENSPMEG00000015724	rbm46	92	64.537	Poecilia_mexicana
ENSCPOG00000010284	-	99	62.683	ENSPREG00000014464	rbm46	98	63.924	Poecilia_reticulata
ENSCPOG00000010284	-	100	94.757	ENSPPYG00000015144	RBM46	100	94.757	Pongo_abelii
ENSCPOG00000010284	-	99	88.865	ENSPCAG00000003110	RBM46	99	87.805	Procavia_capensis
ENSCPOG00000010284	-	100	95.319	ENSPCOG00000024347	RBM46	100	95.319	Propithecus_coquereli
ENSCPOG00000010284	-	99	96.360	ENSPVAG00000008376	RBM46	100	95.318	Pteropus_vampyrus
ENSCPOG00000010284	-	95	68.547	ENSPNAG00000025312	rbm46	99	63.977	Pygocentrus_nattereri
ENSCPOG00000010284	-	100	95.506	ENSRNOG00000025823	Rbm46	100	95.506	Rattus_norvegicus
ENSCPOG00000010284	-	100	95.106	ENSRBIG00000032583	RBM46	100	95.106	Rhinopithecus_bieti
ENSCPOG00000010284	-	100	94.894	ENSRROG00000044288	RBM46	100	94.894	Rhinopithecus_roxellana
ENSCPOG00000010284	-	100	95.957	ENSSBOG00000033028	RBM46	100	95.957	Saimiri_boliviensis_boliviensis
ENSCPOG00000010284	-	100	94.757	ENSSHAG00000012596	RBM46	100	94.757	Sarcophilus_harrisii
ENSCPOG00000010284	-	98	72.113	ENSSFOG00015000087	rbm46	98	67.362	Scleropages_formosus
ENSCPOG00000010284	-	95	62.864	ENSSMAG00000017042	rbm46	93	62.864	Scophthalmus_maximus
ENSCPOG00000010284	-	97	66.017	ENSSDUG00000020645	rbm46	89	66.017	Seriola_dumerili
ENSCPOG00000010284	-	99	96.574	ENSSARG00000006520	RBM46	100	95.506	Sorex_araneus
ENSCPOG00000010284	-	99	93.148	ENSSPUG00000012525	-	100	90.317	Sphenodon_punctatus
ENSCPOG00000010284	-	99	91.026	ENSSPUG00000004773	-	98	91.026	Sphenodon_punctatus
ENSCPOG00000010284	-	96	62.472	ENSSPAG00000013697	rbm46	97	61.456	Stegastes_partitus
ENSCPOG00000010284	-	100	96.289	ENSSSCG00000008994	RBM46	100	96.289	Sus_scrofa
ENSCPOG00000010284	-	99	83.940	ENSTGUG00000005307	RBM46	100	83.940	Taeniopygia_guttata
ENSCPOG00000010284	-	97	63.043	ENSTRUG00000004237	rbm46	91	63.043	Takifugu_rubripes
ENSCPOG00000010284	-	97	60.470	ENSTNIG00000008714	rbm46	95	57.088	Tetraodon_nigroviridis
ENSCPOG00000010284	-	99	93.362	ENSTBEG00000013949	RBM46	100	91.573	Tupaia_belangeri
ENSCPOG00000010284	-	100	93.820	ENSTTRG00000001239	RBM46	100	93.820	Tursiops_truncatus
ENSCPOG00000010284	-	100	96.495	ENSUAMG00000026593	RBM46	100	96.495	Ursus_americanus
ENSCPOG00000010284	-	100	96.289	ENSUMAG00000016442	RBM46	100	96.289	Ursus_maritimus
ENSCPOG00000010284	-	100	96.495	ENSVVUG00000024957	RBM46	100	96.495	Vulpes_vulpes
ENSCPOG00000010284	-	79	72.087	ENSXETG00000032067	-	100	71.545	Xenopus_tropicalis
ENSCPOG00000010284	-	99	76.660	ENSXETG00000022412	-	99	73.783	Xenopus_tropicalis
ENSCPOG00000010284	-	100	56.030	ENSXETG00000032344	-	100	56.030	Xenopus_tropicalis
ENSCPOG00000010284	-	95	65.000	ENSXMAG00000008237	rbm46	94	63.125	Xiphophorus_maculatus