EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000010404 (Gene tree)
Gene ID: 100726564
Gene Symbol: GPATCH3
Alias: FLJ12455|GPATC3
Full Name: G-patch domain containing 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 10223 bases
Position: chrDS562880.1:9279201-9289423
Accession: 100726564
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000009344	G-patch	PF01585.23	7.6e-08	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000010498	GPATCH3-201	2087	XM_003471292	ENSCPOP00000009344	523 (aa)	XP_003471340	H0VGT8

Gene Model

Click here to download ENSCPOG00000010404's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010404's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010404	GPATCH3	99	85.249	ENSG00000198746	GPATCH3	100	92.969	Homo_sapiens
ENSCPOG00000010404	GPATCH3	95	55.340	ENSAPOG00000001212	gpatch3	97	55.922	Acanthochromis_polyacanthus
ENSCPOG00000010404	GPATCH3	98	85.127	ENSAMEG00000010801	GPATCH3	97	85.127	Ailuropoda_melanoleuca
ENSCPOG00000010404	GPATCH3	95	56.055	ENSAOCG00000019352	gpatch3	97	56.641	Amphiprion_ocellaris
ENSCPOG00000010404	GPATCH3	95	55.664	ENSAPEG00000018926	gpatch3	97	55.469	Amphiprion_percula
ENSCPOG00000010404	GPATCH3	95	53.606	ENSATEG00000023759	gpatch3	97	53.606	Anabas_testudineus
ENSCPOG00000010404	GPATCH3	64	73.314	ENSAPLG00000010745	GPATCH3	99	72.271	Anas_platyrhynchos
ENSCPOG00000010404	GPATCH3	95	59.273	ENSACAG00000016709	GPATCH3	95	57.935	Anolis_carolinensis
ENSCPOG00000010404	GPATCH3	98	86.019	ENSANAG00000035944	GPATCH3	99	85.965	Aotus_nancymaae
ENSCPOG00000010404	GPATCH3	95	54.581	ENSACLG00000012807	gpatch3	97	54.440	Astatotilapia_calliptera
ENSCPOG00000010404	GPATCH3	94	54.767	ENSAMXG00000034582	gpatch3	95	54.767	Astyanax_mexicanus
ENSCPOG00000010404	GPATCH3	100	82.409	ENSBTAG00000014849	GPATCH3	97	83.529	Bos_taurus
ENSCPOG00000010404	GPATCH3	95	36.381	WBGene00019467	K07B1.7	95	36.636	Caenorhabditis_elegans
ENSCPOG00000010404	GPATCH3	99	85.521	ENSCJAG00000010000	GPATCH3	97	85.770	Callithrix_jacchus
ENSCPOG00000010404	GPATCH3	100	83.969	ENSCAFG00000012265	GPATCH3	97	84.932	Canis_familiaris
ENSCPOG00000010404	GPATCH3	100	83.969	ENSCAFG00020021640	GPATCH3	97	84.932	Canis_lupus_dingo
ENSCPOG00000010404	GPATCH3	100	82.409	ENSCHIG00000024245	GPATCH3	96	83.529	Capra_hircus
ENSCPOG00000010404	GPATCH3	100	85.905	ENSTSYG00000011753	GPATCH3	98	86.550	Carlito_syrichta
ENSCPOG00000010404	GPATCH3	64	94.611	ENSCAPG00000007313	GPATCH3	100	94.611	Cavia_aperea
ENSCPOG00000010404	GPATCH3	98	85.049	ENSCCAG00000030482	GPATCH3	99	84.990	Cebus_capucinus
ENSCPOG00000010404	GPATCH3	99	82.375	ENSCATG00000033598	GPATCH3	98	82.846	Cercocebus_atys
ENSCPOG00000010404	GPATCH3	98	90.020	ENSCLAG00000012064	GPATCH3	98	89.824	Chinchilla_lanigera
ENSCPOG00000010404	GPATCH3	97	64.844	ENSCPBG00000024968	GPATCH3	95	65.675	Chrysemys_picta_bellii
ENSCPOG00000010404	GPATCH3	99	84.866	ENSCANG00000036795	GPATCH3	98	85.380	Colobus_angolensis_palliatus
ENSCPOG00000010404	GPATCH3	100	81.333	ENSCGRG00001002930	Gpatch3	98	82.066	Cricetulus_griseus_chok1gshd
ENSCPOG00000010404	GPATCH3	100	81.333	ENSCGRG00000004699	Gpatch3	98	82.066	Cricetulus_griseus_crigri
ENSCPOG00000010404	GPATCH3	95	55.447	ENSCSEG00000005277	gpatch3	97	55.837	Cynoglossus_semilaevis
ENSCPOG00000010404	GPATCH3	95	55.426	ENSCVAG00000000827	gpatch3	97	55.426	Cyprinodon_variegatus
ENSCPOG00000010404	GPATCH3	90	70.698	ENSDARG00000052747	gpatch3	66	70.698	Danio_rerio
ENSCPOG00000010404	GPATCH3	100	83.748	ENSDNOG00000016999	GPATCH3	98	84.540	Dasypus_novemcinctus
ENSCPOG00000010404	GPATCH3	93	44.922	ENSEBUG00000013911	gpatch3	91	43.922	Eptatretus_burgeri
ENSCPOG00000010404	GPATCH3	100	84.381	ENSEASG00005008636	GPATCH3	98	85.185	Equus_asinus_asinus
ENSCPOG00000010404	GPATCH3	100	84.381	ENSECAG00000007653	GPATCH3	98	85.352	Equus_caballus
ENSCPOG00000010404	GPATCH3	95	55.929	ENSELUG00000000963	gpatch3	97	55.731	Esox_lucius
ENSCPOG00000010404	GPATCH3	100	83.048	ENSFCAG00000012819	GPATCH3	98	83.984	Felis_catus
ENSCPOG00000010404	GPATCH3	68	68.056	ENSFALG00000000319	GPATCH3	96	70.029	Ficedula_albicollis
ENSCPOG00000010404	GPATCH3	99	87.908	ENSFDAG00000016270	GPATCH3	98	88.454	Fukomys_damarensis
ENSCPOG00000010404	GPATCH3	95	55.319	ENSFHEG00000015264	gpatch3	97	56.530	Fundulus_heteroclitus
ENSCPOG00000010404	GPATCH3	94	55.361	ENSGMOG00000000991	gpatch3	97	55.556	Gadus_morhua
ENSCPOG00000010404	GPATCH3	95	62.698	ENSGALG00000000881	GPATCH3	94	62.425	Gallus_gallus
ENSCPOG00000010404	GPATCH3	94	54.102	ENSGAFG00000002531	gpatch3	92	61.988	Gambusia_affinis
ENSCPOG00000010404	GPATCH3	95	56.395	ENSGACG00000007199	gpatch3	97	55.620	Gasterosteus_aculeatus
ENSCPOG00000010404	GPATCH3	99	63.258	ENSGAGG00000023286	GPATCH3	98	63.340	Gopherus_agassizii
ENSCPOG00000010404	GPATCH3	99	85.441	ENSGGOG00000015305	GPATCH3	98	85.965	Gorilla_gorilla
ENSCPOG00000010404	GPATCH3	95	54.386	ENSHBUG00000020513	gpatch3	96	62.108	Haplochromis_burtoni
ENSCPOG00000010404	GPATCH3	99	88.953	ENSHGLG00000012492	GPATCH3	98	89.041	Heterocephalus_glaber_female
ENSCPOG00000010404	GPATCH3	99	88.953	ENSHGLG00100016909	GPATCH3	98	89.041	Heterocephalus_glaber_male
ENSCPOG00000010404	GPATCH3	94	56.016	ENSHCOG00000005739	gpatch3	96	56.410	Hippocampus_comes
ENSCPOG00000010404	GPATCH3	95	53.772	ENSIPUG00000007697	gpatch3	99	65.064	Ictalurus_punctatus
ENSCPOG00000010404	GPATCH3	99	84.674	ENSSTOG00000015220	GPATCH3	98	85.742	Ictidomys_tridecemlineatus
ENSCPOG00000010404	GPATCH3	100	81.132	ENSJJAG00000003292	Gpatch3	100	81.132	Jaculus_jaculus
ENSCPOG00000010404	GPATCH3	95	55.598	ENSKMAG00000020717	gpatch3	98	55.212	Kryptolebias_marmoratus
ENSCPOG00000010404	GPATCH3	94	53.725	ENSLBEG00000007046	gpatch3	95	54.599	Labrus_bergylta
ENSCPOG00000010404	GPATCH3	92	75.785	ENSLACG00000011400	GPATCH3	71	76.364	Latimeria_chalumnae
ENSCPOG00000010404	GPATCH3	94	56.827	ENSLOCG00000003858	gpatch3	97	56.827	Lepisosteus_oculatus
ENSCPOG00000010404	GPATCH3	98	83.883	ENSLAFG00000016691	GPATCH3	98	83.821	Loxodonta_africana
ENSCPOG00000010404	GPATCH3	99	85.632	ENSMFAG00000030918	GPATCH3	98	86.160	Macaca_fascicularis
ENSCPOG00000010404	GPATCH3	99	85.441	ENSMMUG00000018723	GPATCH3	98	85.965	Macaca_mulatta
ENSCPOG00000010404	GPATCH3	86	74.834	ENSMNEG00000033889	GPATCH3	94	74.834	Macaca_nemestrina
ENSCPOG00000010404	GPATCH3	99	86.015	ENSMLEG00000033364	GPATCH3	98	86.550	Mandrillus_leucophaeus
ENSCPOG00000010404	GPATCH3	95	55.469	ENSMAMG00000023975	gpatch3	97	56.250	Mastacembelus_armatus
ENSCPOG00000010404	GPATCH3	95	54.581	ENSMZEG00005019731	gpatch3	97	54.440	Maylandia_zebra
ENSCPOG00000010404	GPATCH3	66	68.927	ENSMGAG00000000813	GPATCH3	96	70.000	Meleagris_gallopavo
ENSCPOG00000010404	GPATCH3	100	82.008	ENSMAUG00000002005	Gpatch3	98	83.140	Mesocricetus_auratus
ENSCPOG00000010404	GPATCH3	100	85.714	ENSMICG00000015656	GPATCH3	98	86.719	Microcebus_murinus
ENSCPOG00000010404	GPATCH3	100	81.973	ENSMOCG00000022375	Gpatch3	98	83.041	Microtus_ochrogaster
ENSCPOG00000010404	GPATCH3	63	63.830	ENSMMOG00000008963	gpatch3	93	63.746	Mola_mola
ENSCPOG00000010404	GPATCH3	99	73.194	ENSMODG00000014417	GPATCH3	97	73.704	Monodelphis_domestica
ENSCPOG00000010404	GPATCH3	95	55.010	ENSMALG00000007586	gpatch3	97	55.010	Monopterus_albus
ENSCPOG00000010404	GPATCH3	100	82.476	MGP_CAROLIEiJ_G0026594	Gpatch3	98	83.236	Mus_caroli
ENSCPOG00000010404	GPATCH3	99	82.759	ENSMUSG00000028850	Gpatch3	98	83.074	Mus_musculus
ENSCPOG00000010404	GPATCH3	100	81.143	MGP_PahariEiJ_G0028927	Gpatch3	98	82.456	Mus_pahari
ENSCPOG00000010404	GPATCH3	99	82.150	MGP_SPRETEiJ_G0027575	Gpatch3	99	88.657	Mus_spretus
ENSCPOG00000010404	GPATCH3	100	83.969	ENSMPUG00000015665	GPATCH3	97	84.932	Mustela_putorius_furo
ENSCPOG00000010404	GPATCH3	100	83.112	ENSMLUG00000023528	GPATCH3	98	84.405	Myotis_lucifugus
ENSCPOG00000010404	GPATCH3	98	83.431	ENSNGAG00000006821	Gpatch3	98	83.366	Nannospalax_galili
ENSCPOG00000010404	GPATCH3	95	52.495	ENSNBRG00000000365	gpatch3	97	52.174	Neolamprologus_brichardi
ENSCPOG00000010404	GPATCH3	99	81.310	ENSNLEG00000009387	GPATCH3	98	81.569	Nomascus_leucogenys
ENSCPOG00000010404	GPATCH3	99	73.823	ENSMEUG00000003236	GPATCH3	97	74.472	Notamacropus_eugenii
ENSCPOG00000010404	GPATCH3	99	83.430	ENSOPRG00000016429	GPATCH3	98	83.789	Ochotona_princeps
ENSCPOG00000010404	GPATCH3	100	88.740	ENSODEG00000003292	GPATCH3	97	89.432	Octodon_degus
ENSCPOG00000010404	GPATCH3	96	56.410	ENSONIG00000006771	gpatch3	97	56.213	Oreochromis_niloticus
ENSCPOG00000010404	GPATCH3	88	79.437	ENSOCUG00000006411	GPATCH3	100	79.325	Oryctolagus_cuniculus
ENSCPOG00000010404	GPATCH3	94	55.315	ENSORLG00000004435	gpatch3	96	55.315	Oryzias_latipes
ENSCPOG00000010404	GPATCH3	94	54.369	ENSORLG00020022609	gpatch3	97	56.335	Oryzias_latipes_hni
ENSCPOG00000010404	GPATCH3	94	55.186	ENSORLG00015008692	gpatch3	92	62.222	Oryzias_latipes_hsok
ENSCPOG00000010404	GPATCH3	94	55.248	ENSOMEG00000010991	gpatch3	96	54.890	Oryzias_melastigma
ENSCPOG00000010404	GPATCH3	99	84.837	ENSOGAG00000011647	GPATCH3	98	85.380	Otolemur_garnettii
ENSCPOG00000010404	GPATCH3	100	82.218	ENSOARG00000003955	GPATCH3	95	83.333	Ovis_aries
ENSCPOG00000010404	GPATCH3	99	84.674	ENSPPAG00000032902	GPATCH3	98	85.185	Pan_paniscus
ENSCPOG00000010404	GPATCH3	100	83.429	ENSPPRG00000024244	GPATCH3	98	84.375	Panthera_pardus
ENSCPOG00000010404	GPATCH3	100	82.331	ENSPTIG00000014693	GPATCH3	98	83.237	Panthera_tigris_altaica
ENSCPOG00000010404	GPATCH3	99	85.057	ENSPTRG00000023419	GPATCH3	98	85.575	Pan_troglodytes
ENSCPOG00000010404	GPATCH3	99	85.824	ENSPANG00000007984	GPATCH3	98	86.355	Papio_anubis
ENSCPOG00000010404	GPATCH3	95	57.367	ENSPKIG00000020073	gpatch3	96	56.890	Paramormyrops_kingsleyae
ENSCPOG00000010404	GPATCH3	77	70.976	ENSPSIG00000017160	GPATCH3	97	72.070	Pelodiscus_sinensis
ENSCPOG00000010404	GPATCH3	95	54.971	ENSPMGG00000001703	gpatch3	97	54.971	Periophthalmus_magnuspinnatus
ENSCPOG00000010404	GPATCH3	100	82.667	ENSPEMG00000020632	Gpatch3	98	84.211	Peromyscus_maniculatus_bairdii
ENSCPOG00000010404	GPATCH3	99	72.846	ENSPCIG00000012681	GPATCH3	97	74.088	Phascolarctos_cinereus
ENSCPOG00000010404	GPATCH3	95	55.731	ENSPFOG00000009928	gpatch3	97	56.522	Poecilia_formosa
ENSCPOG00000010404	GPATCH3	95	53.475	ENSPLAG00000023784	gpatch3	97	54.054	Poecilia_latipinna
ENSCPOG00000010404	GPATCH3	95	54.070	ENSPMEG00000010268	gpatch3	97	54.264	Poecilia_mexicana
ENSCPOG00000010404	GPATCH3	95	55.600	ENSPREG00000008873	gpatch3	97	55.400	Poecilia_reticulata
ENSCPOG00000010404	GPATCH3	98	86.719	ENSPPYG00000001675	GPATCH3	98	86.719	Pongo_abelii
ENSCPOG00000010404	GPATCH3	98	84.600	ENSPCAG00000008286	GPATCH3	98	84.540	Procavia_capensis
ENSCPOG00000010404	GPATCH3	100	85.714	ENSPCOG00000020145	GPATCH3	98	86.355	Propithecus_coquereli
ENSCPOG00000010404	GPATCH3	100	76.616	ENSPVAG00000017282	GPATCH3	98	77.432	Pteropus_vampyrus
ENSCPOG00000010404	GPATCH3	95	54.581	ENSPNYG00000005172	gpatch3	99	54.440	Pundamilia_nyererei
ENSCPOG00000010404	GPATCH3	94	57.033	ENSPNAG00000018501	gpatch3	97	56.647	Pygocentrus_nattereri
ENSCPOG00000010404	GPATCH3	100	82.443	ENSRNOG00000007097	Gpatch3	98	83.203	Rattus_norvegicus
ENSCPOG00000010404	GPATCH3	99	85.441	ENSRBIG00000005853	GPATCH3	98	85.380	Rhinopithecus_bieti
ENSCPOG00000010404	GPATCH3	99	85.441	ENSRROG00000038382	GPATCH3	98	85.965	Rhinopithecus_roxellana
ENSCPOG00000010404	GPATCH3	98	86.408	ENSSBOG00000019680	GPATCH3	98	90.313	Saimiri_boliviensis_boliviensis
ENSCPOG00000010404	GPATCH3	97	74.369	ENSSHAG00000014268	GPATCH3	98	74.088	Sarcophilus_harrisii
ENSCPOG00000010404	GPATCH3	95	55.706	ENSSFOG00015009602	gpatch3	98	55.126	Scleropages_formosus
ENSCPOG00000010404	GPATCH3	94	56.088	ENSSMAG00000002067	gpatch3	96	55.289	Scophthalmus_maximus
ENSCPOG00000010404	GPATCH3	94	55.534	ENSSDUG00000017071	gpatch3	96	55.534	Seriola_dumerili
ENSCPOG00000010404	GPATCH3	94	55.336	ENSSLDG00000016549	gpatch3	96	55.336	Seriola_lalandi_dorsalis
ENSCPOG00000010404	GPATCH3	98	59.465	ENSSPUG00000018299	GPATCH3	98	59.962	Sphenodon_punctatus
ENSCPOG00000010404	GPATCH3	95	56.140	ENSSPAG00000013046	gpatch3	97	55.945	Stegastes_partitus
ENSCPOG00000010404	GPATCH3	100	84.190	ENSSSCG00000003564	GPATCH3	95	86.560	Sus_scrofa
ENSCPOG00000010404	GPATCH3	76	65.174	ENSTGUG00000000986	GPATCH3	99	65.087	Taeniopygia_guttata
ENSCPOG00000010404	GPATCH3	95	52.281	ENSTRUG00000013294	gpatch3	98	51.901	Takifugu_rubripes
ENSCPOG00000010404	GPATCH3	95	54.795	ENSTNIG00000009657	gpatch3	99	54.403	Tetraodon_nigroviridis
ENSCPOG00000010404	GPATCH3	82	92.683	ENSTBEG00000002042	GPATCH3	82	92.593	Tupaia_belangeri
ENSCPOG00000010404	GPATCH3	98	77.388	ENSTTRG00000016677	GPATCH3	98	77.193	Tursiops_truncatus
ENSCPOG00000010404	GPATCH3	98	84.736	ENSUAMG00000026235	GPATCH3	97	84.736	Ursus_americanus
ENSCPOG00000010404	GPATCH3	98	84.736	ENSUMAG00000011894	GPATCH3	97	84.736	Ursus_maritimus
ENSCPOG00000010404	GPATCH3	100	84.542	ENSVVUG00000012041	GPATCH3	97	85.519	Vulpes_vulpes
ENSCPOG00000010404	GPATCH3	96	51.373	ENSXETG00000030345	GPATCH3	100	51.373	Xenopus_tropicalis
ENSCPOG00000010404	GPATCH3	95	52.400	ENSXCOG00000016129	gpatch3	97	52.400	Xiphophorus_couchianus
ENSCPOG00000010404	GPATCH3	95	55.078	ENSXMAG00000010749	gpatch3	97	54.297	Xiphophorus_maculatus