EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000010747 (Gene tree)
Gene ID: 100733009
Gene Symbol: -
Alias: -
Full Name: pre-mRNA processing factor 4
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 14959 bases
Position: chrDS562948.1:5758307-5773265
Accession: 100733009
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000009648	PRP4	PF08799.11	4.2e-14	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000010845	-	2470	XM_003463795	ENSCPOP00000009648	521 (aa)	XP_003463843	H0VHL0

Gene Model

Click here to download ENSCPOG00000010747's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010747's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000010747	-	57	30.061	ENSCPOG00000005713	-	93	30.061
ENSCPOG00000010747	-	100	92.706	ENSCPOG00000014729	-	100	92.706
ENSCPOG00000010747	-	56	34.667	ENSCPOG00000015525	POC1B	61	34.667

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010747	-	100	98.848	ENSG00000136875	PRPF4	100	98.848	Homo_sapiens
ENSCPOG00000010747	-	96	76.987	ENSAPOG00000014132	prpf4	98	76.987	Acanthochromis_polyacanthus
ENSCPOG00000010747	-	100	99.040	ENSAMEG00000013048	PRPF4	98	99.040	Ailuropoda_melanoleuca
ENSCPOG00000010747	-	96	76.786	ENSACIG00000005579	prpf4	99	76.786	Amphilophus_citrinellus
ENSCPOG00000010747	-	96	76.436	ENSAOCG00000005457	prpf4	99	76.436	Amphiprion_ocellaris
ENSCPOG00000010747	-	96	76.238	ENSAPEG00000000776	prpf4	99	76.238	Amphiprion_percula
ENSCPOG00000010747	-	96	76.190	ENSATEG00000023013	prpf4	99	76.190	Anabas_testudineus
ENSCPOG00000010747	-	100	88.868	ENSAPLG00000006534	PRPF4	97	88.868	Anas_platyrhynchos
ENSCPOG00000010747	-	100	89.675	ENSACAG00000015110	PRPF4	100	89.675	Anolis_carolinensis
ENSCPOG00000010747	-	100	99.232	ENSANAG00000022464	PRPF4	96	99.232	Aotus_nancymaae
ENSCPOG00000010747	-	96	76.587	ENSACLG00000019031	prpf4	99	76.587	Astatotilapia_calliptera
ENSCPOG00000010747	-	97	61.996	ENSAMXG00000006756	prpf4	99	73.069	Astyanax_mexicanus
ENSCPOG00000010747	-	100	98.273	ENSBTAG00000004571	PRPF4	100	98.273	Bos_taurus
ENSCPOG00000010747	-	90	43.579	WBGene00007972	prp-4	96	43.579	Caenorhabditis_elegans
ENSCPOG00000010747	-	100	99.042	ENSCJAG00000017856	PRPF4	100	99.042	Callithrix_jacchus
ENSCPOG00000010747	-	100	99.040	ENSCAFG00000003224	PRPF4	97	99.040	Canis_familiaris
ENSCPOG00000010747	-	100	99.040	ENSCAFG00020022637	PRPF4	100	99.040	Canis_lupus_dingo
ENSCPOG00000010747	-	100	98.851	ENSCHIG00000024648	-	100	98.851	Capra_hircus
ENSCPOG00000010747	-	100	99.040	ENSTSYG00000010366	PRPF4	100	99.040	Carlito_syrichta
ENSCPOG00000010747	-	88	88.544	ENSCAPG00000008935	PRPF4	97	88.544	Cavia_aperea
ENSCPOG00000010747	-	100	99.040	ENSCCAG00000028990	PRPF4	100	99.040	Cebus_capucinus
ENSCPOG00000010747	-	100	98.848	ENSCATG00000021552	PRPF4	100	98.848	Cercocebus_atys
ENSCPOG00000010747	-	100	99.424	ENSCLAG00000013448	PRPF4	100	99.424	Chinchilla_lanigera
ENSCPOG00000010747	-	87	95.354	ENSCHOG00000007233	PRPF4	100	95.354	Choloepus_hoffmanni
ENSCPOG00000010747	-	99	90.680	ENSCPBG00000019136	PRPF4	74	90.680	Chrysemys_picta_bellii
ENSCPOG00000010747	-	96	58.661	ENSCING00000001299	-	97	58.020	Ciona_intestinalis
ENSCPOG00000010747	-	96	57.540	ENSCSAVG00000009178	-	99	58.874	Ciona_savignyi
ENSCPOG00000010747	-	100	99.040	ENSCANG00000003246	PRPF4	100	99.040	Colobus_angolensis_palliatus
ENSCPOG00000010747	-	100	98.848	ENSCGRG00001016992	Prpf4	100	98.848	Cricetulus_griseus_chok1gshd
ENSCPOG00000010747	-	100	98.848	ENSCGRG00000017560	Prpf4	100	98.848	Cricetulus_griseus_crigri
ENSCPOG00000010747	-	97	75.248	ENSCSEG00000020451	prpf4	99	75.248	Cynoglossus_semilaevis
ENSCPOG00000010747	-	97	79.406	ENSDARG00000067639	prpf4	99	79.406	Danio_rerio
ENSCPOG00000010747	-	100	98.467	ENSDNOG00000013203	PRPF4	100	98.467	Dasypus_novemcinctus
ENSCPOG00000010747	-	100	98.848	ENSDORG00000026275	Prpf4	100	98.848	Dipodomys_ordii
ENSCPOG00000010747	-	87	56.018	FBgn0036733	U4-U6-60K	99	50.000	Drosophila_melanogaster
ENSCPOG00000010747	-	100	96.941	ENSETEG00000020389	PRPF4	100	96.941	Echinops_telfairi
ENSCPOG00000010747	-	95	72.581	ENSEBUG00000015229	prpf4	86	73.041	Eptatretus_burgeri
ENSCPOG00000010747	-	100	99.232	ENSEASG00005022678	PRPF4	100	99.232	Equus_asinus_asinus
ENSCPOG00000010747	-	100	99.232	ENSECAG00000007072	PRPF4	100	99.232	Equus_caballus
ENSCPOG00000010747	-	100	78.166	ENSEEUG00000007480	PRPF4	100	78.166	Erinaceus_europaeus
ENSCPOG00000010747	-	97	80.594	ENSELUG00000007510	prpf4	99	80.594	Esox_lucius
ENSCPOG00000010747	-	100	99.042	ENSFCAG00000005514	PRPF4	100	99.042	Felis_catus
ENSCPOG00000010747	-	98	87.892	ENSFALG00000005423	PRPF4	90	85.161	Ficedula_albicollis
ENSCPOG00000010747	-	100	99.232	ENSFDAG00000005839	PRPF4	100	99.232	Fukomys_damarensis
ENSCPOG00000010747	-	96	75.794	ENSFHEG00000001300	prpf4	99	75.794	Fundulus_heteroclitus
ENSCPOG00000010747	-	98	89.824	ENSGALG00000008857	PRPF4	96	89.147	Gallus_gallus
ENSCPOG00000010747	-	65	71.176	ENSGAFG00000012164	prpf4	70	71.176	Gambusia_affinis
ENSCPOG00000010747	-	96	69.246	ENSGACG00000015476	prpf4	99	68.452	Gasterosteus_aculeatus
ENSCPOG00000010747	-	99	90.485	ENSGAGG00000025029	PRPF4	95	90.485	Gopherus_agassizii
ENSCPOG00000010747	-	100	98.848	ENSGGOG00000006943	PRPF4	100	98.848	Gorilla_gorilla
ENSCPOG00000010747	-	96	76.389	ENSHBUG00000000562	prpf4	99	76.389	Haplochromis_burtoni
ENSCPOG00000010747	-	100	81.836	ENSHGLG00000016628	-	100	82.600	Heterocephalus_glaber_female
ENSCPOG00000010747	-	100	80.998	ENSHGLG00000003838	-	100	80.998	Heterocephalus_glaber_female
ENSCPOG00000010747	-	100	99.232	ENSHGLG00000015191	PRPF4	100	99.232	Heterocephalus_glaber_female
ENSCPOG00000010747	-	100	80.998	ENSHGLG00100005571	-	100	80.998	Heterocephalus_glaber_male
ENSCPOG00000010747	-	97	78.416	ENSIPUG00000017956	PRPF4	99	78.416	Ictalurus_punctatus
ENSCPOG00000010747	-	100	98.656	ENSSTOG00000027833	PRPF4	100	98.656	Ictidomys_tridecemlineatus
ENSCPOG00000010747	-	100	99.232	ENSJJAG00000008838	Prpf4	100	99.232	Jaculus_jaculus
ENSCPOG00000010747	-	96	75.794	ENSKMAG00000013236	prpf4	99	75.794	Kryptolebias_marmoratus
ENSCPOG00000010747	-	96	75.498	ENSLBEG00000020611	prpf4	99	75.498	Labrus_bergylta
ENSCPOG00000010747	-	99	80.154	ENSLACG00000016317	PRPF4	99	80.154	Latimeria_chalumnae
ENSCPOG00000010747	-	97	80.990	ENSLOCG00000000581	prpf4	99	80.990	Lepisosteus_oculatus
ENSCPOG00000010747	-	100	98.276	ENSLAFG00000018225	PRPF4	100	98.276	Loxodonta_africana
ENSCPOG00000010747	-	100	98.656	ENSMFAG00000039397	PRPF4	100	98.656	Macaca_fascicularis
ENSCPOG00000010747	-	100	98.848	ENSMMUG00000005844	PRPF4	100	98.848	Macaca_mulatta
ENSCPOG00000010747	-	100	88.292	ENSMNEG00000033737	PRPF4	100	88.292	Macaca_nemestrina
ENSCPOG00000010747	-	100	98.848	ENSMLEG00000040284	PRPF4	100	98.848	Mandrillus_leucophaeus
ENSCPOG00000010747	-	97	75.740	ENSMAMG00000020141	prpf4	99	75.740	Mastacembelus_armatus
ENSCPOG00000010747	-	96	76.587	ENSMZEG00005023205	prpf4	99	76.587	Maylandia_zebra
ENSCPOG00000010747	-	99	88.077	ENSMGAG00000001796	PRPF4	97	88.077	Meleagris_gallopavo
ENSCPOG00000010747	-	100	98.273	ENSMAUG00000018022	Prpf4	100	98.273	Mesocricetus_auratus
ENSCPOG00000010747	-	100	98.464	ENSMICG00000015022	PRPF4	100	98.276	Microcebus_murinus
ENSCPOG00000010747	-	100	98.273	ENSMOCG00000018273	Prpf4	100	98.273	Microtus_ochrogaster
ENSCPOG00000010747	-	97	74.257	ENSMMOG00000021177	prpf4	99	74.257	Mola_mola
ENSCPOG00000010747	-	100	94.646	ENSMODG00000004444	-	100	94.646	Monodelphis_domestica
ENSCPOG00000010747	-	100	94.455	ENSMODG00000025096	-	97	94.455	Monodelphis_domestica
ENSCPOG00000010747	-	96	76.190	ENSMALG00000013624	prpf4	99	76.190	Monopterus_albus
ENSCPOG00000010747	-	100	98.656	MGP_CAROLIEiJ_G0026078	Prpf4	100	98.656	Mus_caroli
ENSCPOG00000010747	-	100	98.656	ENSMUSG00000066148	Prpf4	100	98.656	Mus_musculus
ENSCPOG00000010747	-	100	98.464	MGP_PahariEiJ_G0028413	Prpf4	100	98.464	Mus_pahari
ENSCPOG00000010747	-	100	98.656	MGP_SPRETEiJ_G0027042	Prpf4	100	98.656	Mus_spretus
ENSCPOG00000010747	-	100	99.040	ENSMPUG00000007883	PRPF4	100	99.040	Mustela_putorius_furo
ENSCPOG00000010747	-	100	99.040	ENSMLUG00000015309	-	97	99.040	Myotis_lucifugus
ENSCPOG00000010747	-	100	97.121	ENSMLUG00000008626	-	97	97.121	Myotis_lucifugus
ENSCPOG00000010747	-	100	93.474	ENSNGAG00000000468	Prpf4	100	93.474	Nannospalax_galili
ENSCPOG00000010747	-	96	76.786	ENSNBRG00000007972	prpf4	99	76.786	Neolamprologus_brichardi
ENSCPOG00000010747	-	100	99.232	ENSNLEG00000016647	PRPF4	100	99.232	Nomascus_leucogenys
ENSCPOG00000010747	-	99	94.358	ENSMEUG00000013256	PRPF4	100	94.358	Notamacropus_eugenii
ENSCPOG00000010747	-	100	98.276	ENSOPRG00000005302	PRPF4	100	98.276	Ochotona_princeps
ENSCPOG00000010747	-	100	99.616	ENSODEG00000018147	PRPF4	100	99.616	Octodon_degus
ENSCPOG00000010747	-	99	74.904	ENSONIG00000012671	prpf4	99	76.587	Oreochromis_niloticus
ENSCPOG00000010747	-	100	99.040	ENSOCUG00000005046	PRPF4	100	99.040	Oryctolagus_cuniculus
ENSCPOG00000010747	-	96	74.502	ENSORLG00000019641	prpf4	98	74.800	Oryzias_latipes
ENSCPOG00000010747	-	96	74.502	ENSORLG00020019438	prpf4	98	74.800	Oryzias_latipes_hni
ENSCPOG00000010747	-	96	74.316	ENSOMEG00000020941	prpf4	99	74.316	Oryzias_melastigma
ENSCPOG00000010747	-	100	94.242	ENSOGAG00000007802	PRPF4	98	94.242	Otolemur_garnettii
ENSCPOG00000010747	-	100	99.040	ENSOARG00000006319	PRPF4	97	99.040	Ovis_aries
ENSCPOG00000010747	-	100	98.848	ENSPPAG00000041797	PRPF4	100	98.848	Pan_paniscus
ENSCPOG00000010747	-	100	99.232	ENSPPRG00000014360	PRPF4	100	99.232	Panthera_pardus
ENSCPOG00000010747	-	100	99.232	ENSPTIG00000009574	PRPF4	100	99.232	Panthera_tigris_altaica
ENSCPOG00000010747	-	100	98.848	ENSPTRG00000021274	PRPF4	100	98.659	Pan_troglodytes
ENSCPOG00000010747	-	100	98.848	ENSPANG00000025776	PRPF4	96	98.848	Papio_anubis
ENSCPOG00000010747	-	97	80.792	ENSPKIG00000017259	prpf4	99	80.792	Paramormyrops_kingsleyae
ENSCPOG00000010747	-	100	89.060	ENSPSIG00000010713	PRPF4	91	89.575	Pelodiscus_sinensis
ENSCPOG00000010747	-	99	58.059	ENSPMGG00000000997	prpf4	99	58.165	Periophthalmus_magnuspinnatus
ENSCPOG00000010747	-	100	98.848	ENSPEMG00000024115	Prpf4	100	98.848	Peromyscus_maniculatus_bairdii
ENSCPOG00000010747	-	99	94.358	ENSPCIG00000003821	PRPF4	99	94.358	Phascolarctos_cinereus
ENSCPOG00000010747	-	96	69.625	ENSPFOG00000013524	prpf4	98	72.981	Poecilia_formosa
ENSCPOG00000010747	-	62	71.560	ENSPLAG00000011620	prpf4	96	72.050	Poecilia_latipinna
ENSCPOG00000010747	-	92	74.096	ENSPMEG00000006813	prpf4	98	74.096	Poecilia_mexicana
ENSCPOG00000010747	-	98	98.635	ENSPCAG00000002561	PRPF4	99	98.635	Procavia_capensis
ENSCPOG00000010747	-	100	99.040	ENSPCOG00000011975	PRPF4	100	99.040	Propithecus_coquereli
ENSCPOG00000010747	-	100	95.019	ENSPVAG00000004708	PRPF4	100	95.019	Pteropus_vampyrus
ENSCPOG00000010747	-	96	76.587	ENSPNYG00000008013	prpf4	99	76.587	Pundamilia_nyererei
ENSCPOG00000010747	-	97	79.604	ENSPNAG00000000697	prpf4	99	79.604	Pygocentrus_nattereri
ENSCPOG00000010747	-	100	98.848	ENSRNOG00000014777	Prpf4	100	98.848	Rattus_norvegicus
ENSCPOG00000010747	-	100	99.040	ENSRBIG00000040221	PRPF4	100	99.040	Rhinopithecus_bieti
ENSCPOG00000010747	-	100	99.040	ENSRROG00000040240	PRPF4	100	99.040	Rhinopithecus_roxellana
ENSCPOG00000010747	-	100	94.837	ENSSHAG00000017658	PRPF4	100	94.837	Sarcophilus_harrisii
ENSCPOG00000010747	-	97	81.584	ENSSFOG00015008963	prpf4	99	81.584	Scleropages_formosus
ENSCPOG00000010747	-	96	75.198	ENSSMAG00000008889	prpf4	99	75.198	Scophthalmus_maximus
ENSCPOG00000010747	-	96	73.108	ENSSDUG00000022083	prpf4	98	73.307	Seriola_dumerili
ENSCPOG00000010747	-	96	73.307	ENSSLDG00000008115	prpf4	98	73.506	Seriola_lalandi_dorsalis
ENSCPOG00000010747	-	100	90.211	ENSSPUG00000015582	PRPF4	100	90.211	Sphenodon_punctatus
ENSCPOG00000010747	-	96	70.809	ENSSPAG00000011286	prpf4	99	70.809	Stegastes_partitus
ENSCPOG00000010747	-	100	99.232	ENSSSCG00000024648	PRPF4	100	99.232	Sus_scrofa
ENSCPOG00000010747	-	95	90.061	ENSTGUG00000002623	PRPF4	100	90.389	Taeniopygia_guttata
ENSCPOG00000010747	-	97	74.901	ENSTRUG00000008853	prpf4	99	74.901	Takifugu_rubripes
ENSCPOG00000010747	-	97	74.257	ENSTNIG00000013250	prpf4	99	74.257	Tetraodon_nigroviridis
ENSCPOG00000010747	-	100	90.613	ENSTBEG00000000821	PRPF4	100	90.613	Tupaia_belangeri
ENSCPOG00000010747	-	80	99.329	ENSTTRG00000003246	PRPF4	85	99.329	Tursiops_truncatus
ENSCPOG00000010747	-	64	96.707	ENSUAMG00000018288	PRPF4	90	96.707	Ursus_americanus
ENSCPOG00000010747	-	100	98.273	ENSUMAG00000019375	PRPF4	100	98.273	Ursus_maritimus
ENSCPOG00000010747	-	100	98.851	ENSVPAG00000005281	PRPF4	100	98.851	Vicugna_pacos
ENSCPOG00000010747	-	100	97.905	ENSVVUG00000002476	PRPF4	100	97.905	Vulpes_vulpes
ENSCPOG00000010747	-	69	58.056	ENSXCOG00000006101	prpf4	93	59.113	Xiphophorus_couchianus
ENSCPOG00000010747	-	88	64.410	ENSXMAG00000002750	prpf4	98	65.209	Xiphophorus_maculatus