EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000010770 (Gene tree)
Gene ID: 100725850
Gene Symbol: -
Alias: -
Full Name: factor interacting with PAPOLA and CPSF1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 72630 bases
Position: chrDS562879.1:23938624-24011253
Accession: 100725850
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000009669	Fip1	PF05182.13	6.2e-25	1	1
ENSCPOP00000028393	Fip1	PF05182.13	6.6e-25	1	1
ENSCPOP00000025185	Fip1	PF05182.13	6.8e-25	1	1
ENSCPOP00000030157	Fip1	PF05182.13	7.4e-25	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000045162	-	5809	XM_003471585	ENSCPOP00000030157	555 (aa)	XP_003471633	A0A286XXV1
ENSCPOT00000045963	-	2314	XM_005004504	ENSCPOP00000028393	510 (aa)	XP_005004561	A0A286XSD3
ENSCPOT00000010868	-	1492	-	ENSCPOP00000009669	483 (aa)	-	H0VHM8
ENSCPOT00000033050	-	2341	XM_005004503	ENSCPOP00000025185	519 (aa)	XP_005004560	A0A286XI89

Gene Model

Click here to download ENSCPOG00000010770's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010770's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010770	-	58	80.851	ENSACIG00000001454	fip1l1b	73	67.725	Amphilophus_citrinellus
ENSCPOG00000010770	-	85	65.116	ENSAOCG00000021043	fip1l1b	84	61.474	Amphiprion_ocellaris
ENSCPOG00000010770	-	85	65.116	ENSAPEG00000022229	fip1l1b	84	61.474	Amphiprion_percula
ENSCPOG00000010770	-	85	67.692	ENSATEG00000021757	fip1l1b	83	63.457	Anabas_testudineus
ENSCPOG00000010770	-	95	75.499	ENSAPLG00000003042	-	98	75.499	Anas_platyrhynchos
ENSCPOG00000010770	-	94	90.909	ENSACAG00000010556	-	97	81.129	Anolis_carolinensis
ENSCPOG00000010770	-	85	66.813	ENSACLG00000010418	fip1l1b	83	62.363	Astatotilapia_calliptera
ENSCPOG00000010770	-	57	42.193	ENSAMXG00000031045	fip1l1a	54	50.000	Astyanax_mexicanus
ENSCPOG00000010770	-	55	55.185	ENSAMXG00000011126	fip1l1b	74	63.924	Astyanax_mexicanus
ENSCPOG00000010770	-	97	97.610	ENSBTAG00000020653	FIP1L1	95	97.610	Bos_taurus
ENSCPOG00000010770	-	100	92.634	ENSCHIG00000025903	-	96	92.634	Capra_hircus
ENSCPOG00000010770	-	96	88.362	ENSCAPG00000009569	-	93	100.000	Cavia_aperea
ENSCPOG00000010770	-	97	88.704	ENSCPBG00000025019	-	93	84.545	Chrysemys_picta_bellii
ENSCPOG00000010770	-	100	96.768	ENSCGRG00001018568	Fip1l1	96	96.768	Cricetulus_griseus_chok1gshd
ENSCPOG00000010770	-	100	96.768	ENSCGRG00000000208	Fip1l1	96	96.768	Cricetulus_griseus_crigri
ENSCPOG00000010770	-	85	65.265	ENSCSEG00000006583	fip1l1b	83	64.317	Cynoglossus_semilaevis
ENSCPOG00000010770	-	85	66.447	ENSCVAG00000023435	fip1l1b	83	61.790	Cyprinodon_variegatus
ENSCPOG00000010770	-	94	75.139	ENSETEG00000018271	-	100	75.139	Echinops_telfairi
ENSCPOG00000010770	-	94	98.750	ENSEASG00005019566	-	92	98.750	Equus_asinus_asinus
ENSCPOG00000010770	-	83	95.990	ENSEEUG00000004965	-	71	95.990	Erinaceus_europaeus
ENSCPOG00000010770	-	85	65.011	ENSFHEG00000003843	fip1l1b	83	61.269	Fundulus_heteroclitus
ENSCPOG00000010770	-	77	33.069	ENSGMOG00000012065	-	56	39.303	Gadus_morhua
ENSCPOG00000010770	-	86	56.592	ENSGMOG00000004913	fip1l1b	88	53.704	Gadus_morhua
ENSCPOG00000010770	-	94	85.132	ENSGALG00000013943	-	92	85.947	Gallus_gallus
ENSCPOG00000010770	-	85	66.812	ENSGAFG00000008253	fip1l1b	82	62.151	Gambusia_affinis
ENSCPOG00000010770	-	96	51.826	ENSGACG00000015946	fip1l1b	86	54.438	Gasterosteus_aculeatus
ENSCPOG00000010770	-	97	88.704	ENSGAGG00000009763	-	93	84.727	Gopherus_agassizii
ENSCPOG00000010770	-	52	48.047	ENSGAGG00000017677	-	69	52.344	Gopherus_agassizii
ENSCPOG00000010770	-	85	66.813	ENSHBUG00000013978	fip1l1b	87	60.632	Haplochromis_burtoni
ENSCPOG00000010770	-	86	67.391	ENSHCOG00000015834	fip1l1b	83	63.261	Hippocampus_comes
ENSCPOG00000010770	-	86	56.522	ENSIPUG00000022454	fip1l1b	81	51.606	Ictalurus_punctatus
ENSCPOG00000010770	-	86	65.864	ENSKMAG00000021938	fip1l1b	83	61.488	Kryptolebias_marmoratus
ENSCPOG00000010770	-	85	63.482	ENSLBEG00000028819	fip1l1b	83	60.887	Labrus_bergylta
ENSCPOG00000010770	-	97	70.980	ENSLACG00000011991	fip1l1a	74	71.503	Latimeria_chalumnae
ENSCPOG00000010770	-	93	62.115	ENSLOCG00000014127	fip1l1b	83	63.983	Lepisosteus_oculatus
ENSCPOG00000010770	-	85	66.740	ENSMAMG00000004535	fip1l1b	83	62.500	Mastacembelus_armatus
ENSCPOG00000010770	-	85	66.813	ENSMZEG00005023828	fip1l1b	83	62.363	Maylandia_zebra
ENSCPOG00000010770	-	94	85.477	ENSMGAG00000011885	-	97	86.307	Meleagris_gallopavo
ENSCPOG00000010770	-	99	90.253	ENSMAUG00000010526	Fip1l1	95	90.975	Mesocricetus_auratus
ENSCPOG00000010770	-	100	95.703	ENSMOCG00000008020	Fip1l1	96	95.512	Microtus_ochrogaster
ENSCPOG00000010770	-	92	90.749	ENSMODG00000020654	-	85	90.308	Monodelphis_domestica
ENSCPOG00000010770	-	86	56.540	ENSMALG00000000838	fip1l1b	79	58.182	Monopterus_albus
ENSCPOG00000010770	-	100	95.871	MGP_CAROLIEiJ_G0027304	Fip1l1	96	96.768	Mus_caroli
ENSCPOG00000010770	-	100	95.871	ENSMUSG00000029227	Fip1l1	96	96.768	Mus_musculus
ENSCPOG00000010770	-	99	96.332	MGP_PahariEiJ_G0017085	Fip1l1	96	96.737	Mus_pahari
ENSCPOG00000010770	-	100	95.871	MGP_SPRETEiJ_G0028299	Fip1l1	96	96.768	Mus_spretus
ENSCPOG00000010770	-	100	98.073	ENSNGAG00000008849	Fip1l1	96	98.073	Nannospalax_galili
ENSCPOG00000010770	-	85	64.482	ENSNBRG00000017832	fip1l1b	84	60.211	Neolamprologus_brichardi
ENSCPOG00000010770	-	59	61.053	ENSMEUG00000012782	-	61	89.655	Notamacropus_eugenii
ENSCPOG00000010770	-	86	64.059	ENSONIG00000008785	fip1l1b	84	59.789	Oreochromis_niloticus
ENSCPOG00000010770	-	51	45.238	ENSOANG00000002812	-	91	57.711	Ornithorhynchus_anatinus
ENSCPOG00000010770	-	92	86.245	ENSOANG00000003384	-	98	77.419	Ornithorhynchus_anatinus
ENSCPOG00000010770	-	85	66.079	ENSORLG00000004397	fip1l1b	83	61.184	Oryzias_latipes
ENSCPOG00000010770	-	85	66.300	ENSORLG00020008716	fip1l1b	83	61.404	Oryzias_latipes_hni
ENSCPOG00000010770	-	85	66.300	ENSORLG00015006736	fip1l1b	83	61.404	Oryzias_latipes_hsok
ENSCPOG00000010770	-	86	48.637	ENSOMEG00000015730	fip1l1b	69	62.703	Oryzias_melastigma
ENSCPOG00000010770	-	99	93.045	ENSOARG00000018767	-	100	93.045	Ovis_aries
ENSCPOG00000010770	-	100	96.409	ENSPEMG00000002025	Fip1l1	96	96.409	Peromyscus_maniculatus_bairdii
ENSCPOG00000010770	-	66	92.212	ENSPCIG00000019318	-	97	88.852	Phascolarctos_cinereus
ENSCPOG00000010770	-	85	62.069	ENSPFOG00000014745	fip1l1b	83	61.588	Poecilia_formosa
ENSCPOG00000010770	-	85	62.581	ENSPLAG00000010954	fip1l1b	83	62.099	Poecilia_latipinna
ENSCPOG00000010770	-	85	62.284	ENSPMEG00000019187	fip1l1b	83	61.803	Poecilia_mexicana
ENSCPOG00000010770	-	76	47.927	ENSPREG00000012535	fip1l1b	69	59.365	Poecilia_reticulata
ENSCPOG00000010770	-	63	98.198	ENSPVAG00000000716	-	61	98.198	Pteropus_vampyrus
ENSCPOG00000010770	-	54	54.579	ENSPNYG00000015976	fip1l1b	58	65.000	Pundamilia_nyererei
ENSCPOG00000010770	-	100	95.871	ENSRNOG00000002275	Fip1l1	96	96.768	Rattus_norvegicus
ENSCPOG00000010770	-	99	87.346	ENSSHAG00000015789	-	98	82.143	Sarcophilus_harrisii
ENSCPOG00000010770	-	77	62.095	ENSSFOG00015017653	fip1l1b	75	59.840	Scleropages_formosus
ENSCPOG00000010770	-	52	45.490	ENSSFOG00015010948	-	55	56.796	Scleropages_formosus
ENSCPOG00000010770	-	85	66.300	ENSSMAG00000013444	fip1l1b	83	66.009	Scophthalmus_maximus
ENSCPOG00000010770	-	85	67.033	ENSSDUG00000004117	fip1l1b	83	63.020	Seriola_dumerili
ENSCPOG00000010770	-	85	67.621	ENSSLDG00000024099	fip1l1b	83	67.544	Seriola_lalandi_dorsalis
ENSCPOG00000010770	-	87	98.020	ENSSARG00000001973	-	87	98.020	Sorex_araneus
ENSCPOG00000010770	-	51	68.571	ENSSPUG00000017328	-	69	90.323	Sphenodon_punctatus
ENSCPOG00000010770	-	85	64.693	ENSSPAG00000017564	fip1l1b	84	60.842	Stegastes_partitus
ENSCPOG00000010770	-	94	83.264	ENSTGUG00000007834	-	99	83.300	Taeniopygia_guttata
ENSCPOG00000010770	-	86	64.629	ENSTRUG00000001545	fip1l1b	83	56.389	Takifugu_rubripes
ENSCPOG00000010770	-	87	58.513	ENSTNIG00000004104	fip1l1b	85	53.229	Tetraodon_nigroviridis
ENSCPOG00000010770	-	76	95.625	ENSTBEG00000007839	-	82	95.625	Tupaia_belangeri
ENSCPOG00000010770	-	95	96.584	ENSUMAG00000002758	-	100	96.584	Ursus_maritimus
ENSCPOG00000010770	-	88	98.020	ENSVPAG00000011574	-	90	98.020	Vicugna_pacos
ENSCPOG00000010770	-	96	73.574	ENSXETG00000011679	fip1l1	78	71.905	Xenopus_tropicalis
ENSCPOG00000010770	-	85	66.812	ENSXMAG00000017620	fip1l1b	83	62.151	Xiphophorus_maculatus