EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000010929 (Gene tree)
Gene ID: 100722788
Gene Symbol: YTHDC1
Alias: KIAA1966|YT521|YT521-B
Full Name: YTH domain containing 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 27975 bases
Position: chrDS562949.1:5368836-5396810
Accession: 100722788
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000020682	YTH	PF04146.15	8e-40	1	1
ENSCPOP00000009820	YTH	PF04146.15	8.4e-40	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011030	YTHDC1-201	2040	XM_003463766	ENSCPOP00000009820	680 (aa)	XP_003463814	H0VI15
ENSCPOT00000027942	YTHDC1-202	1986	-	ENSCPOP00000020682	662 (aa)	-	H0WCG1

Gene Model

Click here to download ENSCPOG00000010929's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000010929's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000010929	YTHDC1	100	91.197	ENSG00000083896	YTHDC1	100	91.892	Homo_sapiens
ENSCPOG00000010929	YTHDC1	54	58.961	ENSAPOG00000013997	ythdc1	57	58.034	Acanthochromis_polyacanthus
ENSCPOG00000010929	YTHDC1	100	90.014	ENSAMEG00000005688	YTHDC1	100	90.014	Ailuropoda_melanoleuca
ENSCPOG00000010929	YTHDC1	54	54.358	ENSAOCG00000000239	ythdc1	59	60.048	Amphiprion_ocellaris
ENSCPOG00000010929	YTHDC1	91	77.711	ENSAPLG00000009921	YTHDC1	92	79.367	Anas_platyrhynchos
ENSCPOG00000010929	YTHDC1	92	77.151	ENSACAG00000009697	YTHDC1	93	77.300	Anolis_carolinensis
ENSCPOG00000010929	YTHDC1	100	90.934	ENSANAG00000001522	YTHDC1	100	90.934	Aotus_nancymaae
ENSCPOG00000010929	YTHDC1	92	47.881	ENSACLG00000019371	ythdc1	59	59.039	Astatotilapia_calliptera
ENSCPOG00000010929	YTHDC1	92	56.324	ENSAMXG00000006978	ythdc1	92	59.479	Astyanax_mexicanus
ENSCPOG00000010929	YTHDC1	100	89.712	ENSBTAG00000015572	YTHDC1	100	89.712	Bos_taurus
ENSCPOG00000010929	YTHDC1	100	91.209	ENSCJAG00000009934	YTHDC1	100	91.209	Callithrix_jacchus
ENSCPOG00000010929	YTHDC1	100	90.014	ENSCAFG00000002821	YTHDC1	100	90.014	Canis_familiaris
ENSCPOG00000010929	YTHDC1	100	90.014	ENSCAFG00020027112	YTHDC1	100	90.014	Canis_lupus_dingo
ENSCPOG00000010929	YTHDC1	90	80.458	ENSCHIG00000004810	YTHDC1	95	93.143	Capra_hircus
ENSCPOG00000010929	YTHDC1	100	91.334	ENSTSYG00000011668	YTHDC1	100	91.334	Carlito_syrichta
ENSCPOG00000010929	YTHDC1	98	78.529	ENSCAPG00000008722	YTHDC1	99	78.529	Cavia_aperea
ENSCPOG00000010929	YTHDC1	100	91.197	ENSCCAG00000035754	YTHDC1	100	91.197	Cebus_capucinus
ENSCPOG00000010929	YTHDC1	100	90.845	ENSCATG00000036320	YTHDC1	97	96.571	Cercocebus_atys
ENSCPOG00000010929	YTHDC1	99	91.448	ENSCLAG00000005482	YTHDC1	99	92.275	Chinchilla_lanigera
ENSCPOG00000010929	YTHDC1	100	91.071	ENSCSAG00000005252	YTHDC1	100	91.071	Chlorocebus_sabaeus
ENSCPOG00000010929	YTHDC1	92	79.434	ENSCPBG00000021965	YTHDC1	92	82.137	Chrysemys_picta_bellii
ENSCPOG00000010929	YTHDC1	100	91.209	ENSCANG00000004769	YTHDC1	96	96.381	Colobus_angolensis_palliatus
ENSCPOG00000010929	YTHDC1	100	89.986	ENSCGRG00001000816	Ythdc1	100	89.986	Cricetulus_griseus_chok1gshd
ENSCPOG00000010929	YTHDC1	99	90.111	ENSCGRG00000009807	Ythdc1	99	90.111	Cricetulus_griseus_crigri
ENSCPOG00000010929	YTHDC1	53	54.831	ENSCVAG00000022349	ythdc1	59	57.971	Cyprinodon_variegatus
ENSCPOG00000010929	YTHDC1	92	56.083	ENSDARG00000051953	ythdc1	58	68.305	Danio_rerio
ENSCPOG00000010929	YTHDC1	92	86.944	ENSDNOG00000004949	YTHDC1	93	87.240	Dasypus_novemcinctus
ENSCPOG00000010929	YTHDC1	99	90.542	ENSDORG00000013045	Ythdc1	100	90.542	Dipodomys_ordii
ENSCPOG00000010929	YTHDC1	69	100.000	ENSETEG00000001878	YTHDC1	70	100.000	Echinops_telfairi
ENSCPOG00000010929	YTHDC1	100	90.287	ENSEASG00005018383	YTHDC1	100	90.287	Equus_asinus_asinus
ENSCPOG00000010929	YTHDC1	100	90.150	ENSECAG00000018303	YTHDC1	99	96.097	Equus_caballus
ENSCPOG00000010929	YTHDC1	92	85.460	ENSEEUG00000015466	YTHDC1	93	86.053	Erinaceus_europaeus
ENSCPOG00000010929	YTHDC1	92	57.518	ENSELUG00000014029	ythdc1	93	58.200	Esox_lucius
ENSCPOG00000010929	YTHDC1	100	90.137	ENSFCAG00000026791	YTHDC1	100	90.137	Felis_catus
ENSCPOG00000010929	YTHDC1	66	78.670	ENSFALG00000006581	YTHDC1	87	82.238	Ficedula_albicollis
ENSCPOG00000010929	YTHDC1	99	91.771	ENSFDAG00000018560	YTHDC1	100	91.771	Fukomys_damarensis
ENSCPOG00000010929	YTHDC1	54	58.730	ENSFHEG00000001286	ythdc1	56	56.393	Fundulus_heteroclitus
ENSCPOG00000010929	YTHDC1	67	60.714	ENSGMOG00000018815	ythdc1	88	60.714	Gadus_morhua
ENSCPOG00000010929	YTHDC1	91	78.806	ENSGALG00000035906	YTHDC1	88	79.810	Gallus_gallus
ENSCPOG00000010929	YTHDC1	54	56.075	ENSGACG00000015486	ythdc1	57	55.916	Gasterosteus_aculeatus
ENSCPOG00000010929	YTHDC1	92	78.963	ENSGAGG00000007108	YTHDC1	93	78.446	Gopherus_agassizii
ENSCPOG00000010929	YTHDC1	100	90.845	ENSGGOG00000021958	YTHDC1	97	96.198	Gorilla_gorilla
ENSCPOG00000010929	YTHDC1	92	47.881	ENSHBUG00000019288	ythdc1	59	59.039	Haplochromis_burtoni
ENSCPOG00000010929	YTHDC1	94	68.694	ENSHGLG00000003239	-	60	70.492	Heterocephalus_glaber_female
ENSCPOG00000010929	YTHDC1	100	91.396	ENSHGLG00000006319	-	100	91.396	Heterocephalus_glaber_female
ENSCPOG00000010929	YTHDC1	100	90.698	ENSHGLG00100001556	-	100	90.698	Heterocephalus_glaber_male
ENSCPOG00000010929	YTHDC1	94	67.208	ENSHGLG00100008060	-	60	68.140	Heterocephalus_glaber_male
ENSCPOG00000010929	YTHDC1	56	70.213	ENSHCOG00000001520	ythdc1	84	70.213	Hippocampus_comes
ENSCPOG00000010929	YTHDC1	92	59.565	ENSIPUG00000018136	ythdc1	61	74.246	Ictalurus_punctatus
ENSCPOG00000010929	YTHDC1	100	89.946	ENSSTOG00000013652	YTHDC1	100	89.946	Ictidomys_tridecemlineatus
ENSCPOG00000010929	YTHDC1	90	84.341	ENSJJAG00000010268	Ythdc1	93	84.970	Jaculus_jaculus
ENSCPOG00000010929	YTHDC1	61	63.462	ENSLBEG00000020831	ythdc1	73	75.000	Labrus_bergylta
ENSCPOG00000010929	YTHDC1	86	65.934	ENSLACG00000004893	YTHDC1	92	68.075	Latimeria_chalumnae
ENSCPOG00000010929	YTHDC1	92	65.630	ENSLOCG00000003045	ythdc1	92	78.606	Lepisosteus_oculatus
ENSCPOG00000010929	YTHDC1	100	88.707	ENSLAFG00000021592	YTHDC1	100	88.707	Loxodonta_africana
ENSCPOG00000010929	YTHDC1	100	90.986	ENSMFAG00000031927	YTHDC1	96	96.381	Macaca_fascicularis
ENSCPOG00000010929	YTHDC1	100	91.209	ENSMMUG00000002265	YTHDC1	95	97.047	Macaca_mulatta
ENSCPOG00000010929	YTHDC1	100	91.209	ENSMNEG00000033751	YTHDC1	96	96.381	Macaca_nemestrina
ENSCPOG00000010929	YTHDC1	100	91.071	ENSMLEG00000042147	YTHDC1	96	96.381	Mandrillus_leucophaeus
ENSCPOG00000010929	YTHDC1	52	54.197	ENSMAMG00000013122	ythdc1	58	59.189	Mastacembelus_armatus
ENSCPOG00000010929	YTHDC1	92	47.881	ENSMZEG00005023173	ythdc1	59	59.039	Maylandia_zebra
ENSCPOG00000010929	YTHDC1	92	77.745	ENSMGAG00000010391	YTHDC1	92	79.228	Meleagris_gallopavo
ENSCPOG00000010929	YTHDC1	100	88.980	ENSMAUG00000001286	Ythdc1	100	88.980	Mesocricetus_auratus
ENSCPOG00000010929	YTHDC1	100	89.552	ENSMICG00000034640	YTHDC1	100	89.552	Microcebus_murinus
ENSCPOG00000010929	YTHDC1	100	89.986	ENSMOCG00000020201	Ythdc1	100	89.986	Microtus_ochrogaster
ENSCPOG00000010929	YTHDC1	54	60.804	ENSMMOG00000021200	ythdc1	58	67.277	Mola_mola
ENSCPOG00000010929	YTHDC1	62	52.766	ENSMODG00000009173	-	88	55.097	Monodelphis_domestica
ENSCPOG00000010929	YTHDC1	86	62.415	ENSMODG00000014337	-	95	63.017	Monodelphis_domestica
ENSCPOG00000010929	YTHDC1	92	81.278	ENSMODG00000020754	-	92	81.426	Monodelphis_domestica
ENSCPOG00000010929	YTHDC1	96	48.000	ENSMODG00000010076	-	96	47.988	Monodelphis_domestica
ENSCPOG00000010929	YTHDC1	92	87.685	MGP_CAROLIEiJ_G0027347	Ythdc1	97	92.322	Mus_caroli
ENSCPOG00000010929	YTHDC1	92	89.185	ENSMUSG00000035851	Ythdc1	97	90.755	Mus_musculus
ENSCPOG00000010929	YTHDC1	100	90.123	MGP_PahariEiJ_G0017126	Ythdc1	100	90.123	Mus_pahari
ENSCPOG00000010929	YTHDC1	100	90.123	MGP_SPRETEiJ_G0028339	Ythdc1	100	90.123	Mus_spretus
ENSCPOG00000010929	YTHDC1	92	66.079	ENSMPUG00000001743	YTHDC1	53	85.640	Mustela_putorius_furo
ENSCPOG00000010929	YTHDC1	91	86.275	ENSMLUG00000016300	YTHDC1	92	86.425	Myotis_lucifugus
ENSCPOG00000010929	YTHDC1	63	95.476	ENSNGAG00000024000	Ythdc1	93	95.249	Nannospalax_galili
ENSCPOG00000010929	YTHDC1	53	62.466	ENSNBRG00000007663	ythdc1	72	66.575	Neolamprologus_brichardi
ENSCPOG00000010929	YTHDC1	99	89.133	ENSNLEG00000009202	YTHDC1	96	95.238	Nomascus_leucogenys
ENSCPOG00000010929	YTHDC1	81	72.575	ENSMEUG00000007128	YTHDC1	81	72.575	Notamacropus_eugenii
ENSCPOG00000010929	YTHDC1	73	88.889	ENSOPRG00000008986	YTHDC1	74	88.889	Ochotona_princeps
ENSCPOG00000010929	YTHDC1	100	92.022	ENSODEG00000001715	YTHDC1	100	92.022	Octodon_degus
ENSCPOG00000010929	YTHDC1	92	48.164	ENSONIG00000012651	ythdc1	58	61.882	Oreochromis_niloticus
ENSCPOG00000010929	YTHDC1	88	67.431	ENSOANG00000014398	YTHDC1	55	83.038	Ornithorhynchus_anatinus
ENSCPOG00000010929	YTHDC1	93	74.260	ENSOCUG00000015886	YTHDC1	57	83.166	Oryctolagus_cuniculus
ENSCPOG00000010929	YTHDC1	90	47.470	ENSORLG00000030544	ythdc1	60	58.696	Oryzias_latipes
ENSCPOG00000010929	YTHDC1	92	48.029	ENSORLG00020019316	ythdc1	60	58.696	Oryzias_latipes_hni
ENSCPOG00000010929	YTHDC1	54	52.523	ENSOMEG00000000551	ythdc1	94	50.143	Oryzias_melastigma
ENSCPOG00000010929	YTHDC1	100	90.371	ENSOGAG00000003362	YTHDC1	100	90.371	Otolemur_garnettii
ENSCPOG00000010929	YTHDC1	100	89.712	ENSOARG00000008633	YTHDC1	100	89.712	Ovis_aries
ENSCPOG00000010929	YTHDC1	100	90.973	ENSPPAG00000041315	YTHDC1	97	96.008	Pan_paniscus
ENSCPOG00000010929	YTHDC1	100	90.028	ENSPPRG00000011979	YTHDC1	100	90.028	Panthera_pardus
ENSCPOG00000010929	YTHDC1	99	89.011	ENSPTIG00000015527	YTHDC1	100	89.601	Panthera_tigris_altaica
ENSCPOG00000010929	YTHDC1	100	90.973	ENSPTRG00000016105	YTHDC1	97	96.008	Pan_troglodytes
ENSCPOG00000010929	YTHDC1	100	90.845	ENSPANG00000021590	YTHDC1	97	95.506	Papio_anubis
ENSCPOG00000010929	YTHDC1	92	65.060	ENSPKIG00000018497	ythdc1	83	74.648	Paramormyrops_kingsleyae
ENSCPOG00000010929	YTHDC1	91	79.398	ENSPSIG00000002782	YTHDC1	92	79.398	Pelodiscus_sinensis
ENSCPOG00000010929	YTHDC1	63	54.768	ENSPMGG00000000970	-	78	60.360	Periophthalmus_magnuspinnatus
ENSCPOG00000010929	YTHDC1	99	90.377	ENSPEMG00000013850	Ythdc1	100	90.377	Peromyscus_maniculatus_bairdii
ENSCPOG00000010929	YTHDC1	92	81.129	ENSPCIG00000006870	YTHDC1	92	81.278	Phascolarctos_cinereus
ENSCPOG00000010929	YTHDC1	54	53.226	ENSPFOG00000013404	ythdc1	60	58.072	Poecilia_formosa
ENSCPOG00000010929	YTHDC1	54	53.226	ENSPLAG00000011079	ythdc1	85	58.072	Poecilia_latipinna
ENSCPOG00000010929	YTHDC1	54	53.226	ENSPMEG00000009238	ythdc1	60	58.072	Poecilia_mexicana
ENSCPOG00000010929	YTHDC1	63	71.429	ENSPREG00000016973	ythdc1	56	61.582	Poecilia_reticulata
ENSCPOG00000010929	YTHDC1	86	90.348	ENSPPYG00000014726	YTHDC1	100	90.348	Pongo_abelii
ENSCPOG00000010929	YTHDC1	76	88.012	ENSPCAG00000009607	YTHDC1	77	87.135	Procavia_capensis
ENSCPOG00000010929	YTHDC1	100	84.803	ENSPCOG00000019105	YTHDC1	100	84.803	Propithecus_coquereli
ENSCPOG00000010929	YTHDC1	92	84.490	ENSPVAG00000015551	YTHDC1	93	84.490	Pteropus_vampyrus
ENSCPOG00000010929	YTHDC1	92	47.881	ENSPNYG00000011687	ythdc1	59	59.039	Pundamilia_nyererei
ENSCPOG00000010929	YTHDC1	92	63.768	ENSPNAG00000028365	ythdc1	93	63.728	Pygocentrus_nattereri
ENSCPOG00000010929	YTHDC1	92	86.277	ENSRNOG00000001996	Ythdc1	93	87.153	Rattus_norvegicus
ENSCPOG00000010929	YTHDC1	91	86.776	ENSRBIG00000028279	YTHDC1	96	93.714	Rhinopithecus_bieti
ENSCPOG00000010929	YTHDC1	100	91.209	ENSRROG00000035028	YTHDC1	96	96.381	Rhinopithecus_roxellana
ENSCPOG00000010929	YTHDC1	100	90.986	ENSSBOG00000022353	YTHDC1	96	96.381	Saimiri_boliviensis_boliviensis
ENSCPOG00000010929	YTHDC1	92	80.089	ENSSHAG00000002538	YTHDC1	91	81.175	Sarcophilus_harrisii
ENSCPOG00000010929	YTHDC1	92	62.845	ENSSFOG00015003298	ythdc1	60	76.777	Scleropages_formosus
ENSCPOG00000010929	YTHDC1	54	54.110	ENSSMAG00000009086	ythdc1	94	50.290	Scophthalmus_maximus
ENSCPOG00000010929	YTHDC1	52	53.365	ENSSDUG00000022008	ythdc1	59	59.954	Seriola_dumerili
ENSCPOG00000010929	YTHDC1	52	53.365	ENSSLDG00000007926	ythdc1	59	59.954	Seriola_lalandi_dorsalis
ENSCPOG00000010929	YTHDC1	78	89.619	ENSSARG00000010960	YTHDC1	100	89.619	Sorex_araneus
ENSCPOG00000010929	YTHDC1	92	75.332	ENSSPUG00000009357	YTHDC1	92	76.809	Sphenodon_punctatus
ENSCPOG00000010929	YTHDC1	54	55.275	ENSSPAG00000011449	ythdc1	59	60.048	Stegastes_partitus
ENSCPOG00000010929	YTHDC1	92	85.277	ENSSSCG00000035505	YTHDC1	93	85.714	Sus_scrofa
ENSCPOG00000010929	YTHDC1	92	78.783	ENSTGUG00000004452	-	92	78.783	Taeniopygia_guttata
ENSCPOG00000010929	YTHDC1	50	68.772	ENSTRUG00000010142	ythdc1	69	71.795	Takifugu_rubripes
ENSCPOG00000010929	YTHDC1	85	55.756	ENSTNIG00000013243	ythdc1	89	58.879	Tetraodon_nigroviridis
ENSCPOG00000010929	YTHDC1	92	79.941	ENSTBEG00000011546	YTHDC1	92	80.089	Tupaia_belangeri
ENSCPOG00000010929	YTHDC1	92	86.243	ENSTTRG00000005083	YTHDC1	93	86.834	Tursiops_truncatus
ENSCPOG00000010929	YTHDC1	93	89.396	ENSUAMG00000010388	YTHDC1	100	89.396	Ursus_americanus
ENSCPOG00000010929	YTHDC1	91	75.000	ENSUMAG00000013668	YTHDC1	90	73.645	Ursus_maritimus
ENSCPOG00000010929	YTHDC1	100	90.127	ENSVPAG00000009040	YTHDC1	100	90.127	Vicugna_pacos
ENSCPOG00000010929	YTHDC1	99	89.178	ENSVVUG00000005387	YTHDC1	100	89.412	Vulpes_vulpes
ENSCPOG00000010929	YTHDC1	91	66.865	ENSXETG00000017960	ythdc1	91	65.923	Xenopus_tropicalis
ENSCPOG00000010929	YTHDC1	54	52.644	ENSXMAG00000005196	ythdc1	61	57.931	Xiphophorus_maculatus