EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000011299 (Gene tree)
Gene ID
100732642
Gene Symbol
CPSF3
Alias
CPSF-73|CPSF73|YSH1
Full Name
cleavage and polyadenylation specific factor 3
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Plus strand
Length
21909 bases
Position
chrDS562930.1:6964919-6986827
Accession
100732642
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000010160CPSF73-100_CPF11718.82.7e-5511
ENSCPOP00000010160Beta-CaspPF10996.84.4e-3411
ENSCPOP00000010160Lactamase_BPF00753.271e-1811
ENSCPOP00000010160RMMBLPF07521.129.8e-2211
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000011405CPSF3-2012867XM_003464954ENSCPOP00000010160684 (aa)XP_003465002H0VIV6
Gene Model
Click here to download ENSCPOG00000011299's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011299's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000011299CPSF36540.044ENSCPOG00000005152INTS117439.780
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000011299CPSF310097.953ENSG00000119203CPSF3100100.000Homo_sapiens
ENSCPOG00000011299CPSF37396.794ENSAPOG00000012241CPSF39096.781Acanthochromis_polyacanthus
ENSCPOG00000011299CPSF39985.714ENSAPOG00000022087cpsf39885.714Acanthochromis_polyacanthus
ENSCPOG00000011299CPSF310097.953ENSAMEG00000008493CPSF310097.953Ailuropoda_melanoleuca
ENSCPOG00000011299CPSF39286.825ENSACIG00000023663CPSF39986.825Amphilophus_citrinellus
ENSCPOG00000011299CPSF39283.599ENSACIG00000009846cpsf39983.599Amphilophus_citrinellus
ENSCPOG00000011299CPSF39988.088ENSAOCG00000010077CPSF39888.088Amphiprion_ocellaris
ENSCPOG00000011299CPSF39985.862ENSAOCG00000022056cpsf39491.156Amphiprion_ocellaris
ENSCPOG00000011299CPSF39988.088ENSAPEG00000021167CPSF39888.088Amphiprion_percula
ENSCPOG00000011299CPSF39986.009ENSAPEG00000019526cpsf39886.009Amphiprion_percula
ENSCPOG00000011299CPSF39986.009ENSATEG00000003959cpsf39886.009Anabas_testudineus
ENSCPOG00000011299CPSF39983.529ENSATEG00000014525CPSF39883.529Anabas_testudineus
ENSCPOG00000011299CPSF39894.345ENSAPLG00000006941CPSF39894.345Anas_platyrhynchos
ENSCPOG00000011299CPSF39392.126ENSACAG00000001759CPSF39992.126Anolis_carolinensis
ENSCPOG00000011299CPSF310091.520ENSANAG00000031254CPSF310091.520Aotus_nancymaae
ENSCPOG00000011299CPSF39786.015ENSACLG00000014484cpsf39986.015Astatotilapia_calliptera
ENSCPOG00000011299CPSF39286.667ENSACLG00000018846CPSF39986.667Astatotilapia_calliptera
ENSCPOG00000011299CPSF39987.794ENSAMXG00000004786cpsf39887.794Astyanax_mexicanus
ENSCPOG00000011299CPSF310098.099ENSBTAG00000019735CPSF310098.099Bos_taurus
ENSCPOG00000011299CPSF39159.055WBGene00013460cpsf-38959.055Caenorhabditis_elegans
ENSCPOG00000011299CPSF310097.515ENSCJAG00000006276CPSF310097.515Callithrix_jacchus
ENSCPOG00000011299CPSF310097.953ENSCAFG00000003375CPSF39597.953Canis_familiaris
ENSCPOG00000011299CPSF39098.384ENSCAFG00020026799CPSF310098.384Canis_lupus_dingo
ENSCPOG00000011299CPSF310098.099ENSCHIG00000013973CPSF310098.099Capra_hircus
ENSCPOG00000011299CPSF310097.807ENSTSYG00000002967CPSF310097.807Carlito_syrichta
ENSCPOG00000011299CPSF39899.850ENSCAPG00000013851CPSF310099.850Cavia_aperea
ENSCPOG00000011299CPSF310097.661ENSCCAG00000036730CPSF310097.661Cebus_capucinus
ENSCPOG00000011299CPSF310095.182ENSCATG00000014770CPSF39999.139Cercocebus_atys
ENSCPOG00000011299CPSF310099.123ENSCLAG00000002727CPSF310099.123Chinchilla_lanigera
ENSCPOG00000011299CPSF310090.058ENSCSAG00000007125CPSF310090.058Chlorocebus_sabaeus
ENSCPOG00000011299CPSF386100.000ENSCHOG00000000180CPSF38571.053Choloepus_hoffmanni
ENSCPOG00000011299CPSF39994.428ENSCPBG00000014074CPSF39994.428Chrysemys_picta_bellii
ENSCPOG00000011299CPSF39967.737ENSCING00000007214-9867.737Ciona_intestinalis
ENSCPOG00000011299CPSF310085.174ENSCANG00000034435CPSF310085.174Colobus_angolensis_palliatus
ENSCPOG00000011299CPSF310097.515ENSCGRG00001013134Cpsf310097.515Cricetulus_griseus_chok1gshd
ENSCPOG00000011299CPSF310097.515ENSCGRG00000018319Cpsf310097.515Cricetulus_griseus_crigri
ENSCPOG00000011299CPSF39987.078ENSCSEG00000002021CPSF39986.862Cynoglossus_semilaevis
ENSCPOG00000011299CPSF39988.382ENSCVAG00000015067CPSF39888.382Cyprinodon_variegatus
ENSCPOG00000011299CPSF39988.235ENSDARG00000027649cpsf39888.235Danio_rerio
ENSCPOG00000011299CPSF310096.496ENSDNOG00000008940CPSF39596.496Dasypus_novemcinctus
ENSCPOG00000011299CPSF39597.696ENSDORG00000014263Cpsf310097.696Dipodomys_ordii
ENSCPOG00000011299CPSF39967.305FBgn0261065Cpsf739867.305Drosophila_melanogaster
ENSCPOG00000011299CPSF39584.025ENSETEG00000003893CPSF310084.025Echinops_telfairi
ENSCPOG00000011299CPSF39978.510ENSEBUG00000009018cpsf39878.653Eptatretus_burgeri
ENSCPOG00000011299CPSF310097.953ENSEASG00005003970CPSF310097.953Equus_asinus_asinus
ENSCPOG00000011299CPSF310097.953ENSECAG00000019911CPSF310097.953Equus_caballus
ENSCPOG00000011299CPSF310082.310ENSEEUG00000015422CPSF310082.310Erinaceus_europaeus
ENSCPOG00000011299CPSF39988.088ENSELUG00000013775cpsf39888.088Esox_lucius
ENSCPOG00000011299CPSF310098.099ENSFCAG00000007852CPSF310098.099Felis_catus
ENSCPOG00000011299CPSF39593.972ENSFALG00000006572CPSF310093.972Ficedula_albicollis
ENSCPOG00000011299CPSF39998.534ENSFDAG00000006317CPSF39998.534Fukomys_damarensis
ENSCPOG00000011299CPSF39985.420ENSFHEG00000014774cpsf39885.420Fundulus_heteroclitus
ENSCPOG00000011299CPSF35969.756ENSFHEG00000012186CPSF39969.756Fundulus_heteroclitus
ENSCPOG00000011299CPSF39986.912ENSGMOG00000003157cpsf39886.912Gadus_morhua
ENSCPOG00000011299CPSF39994.126ENSGALG00000016424CPSF39994.126Gallus_gallus
ENSCPOG00000011299CPSF39988.218ENSGAFG00000008016CPSF39888.218Gambusia_affinis
ENSCPOG00000011299CPSF39282.989ENSGAFG00000019449cpsf39982.989Gambusia_affinis
ENSCPOG00000011299CPSF36891.863ENSGAGG00000025583CPSF39391.863Gopherus_agassizii
ENSCPOG00000011299CPSF310095.565ENSGGOG00000001757CPSF310097.795Gorilla_gorilla
ENSCPOG00000011299CPSF39985.903ENSHBUG00000001188cpsf39985.903Haplochromis_burtoni
ENSCPOG00000011299CPSF35981.975ENSHBUG00000014332CPSF39981.975Haplochromis_burtoni
ENSCPOG00000011299CPSF310098.246ENSHGLG00000000666CPSF39998.246Heterocephalus_glaber_female
ENSCPOG00000011299CPSF310098.246ENSHGLG00100007765CPSF39998.246Heterocephalus_glaber_male
ENSCPOG00000011299CPSF39985.484ENSHCOG00000007251cpsf39985.484Hippocampus_comes
ENSCPOG00000011299CPSF39986.324ENSHCOG00000015957CPSF39786.324Hippocampus_comes
ENSCPOG00000011299CPSF39986.912ENSIPUG00000023488cpsf39886.912Ictalurus_punctatus
ENSCPOG00000011299CPSF310097.368ENSSTOG00000004476CPSF310097.368Ictidomys_tridecemlineatus
ENSCPOG00000011299CPSF310096.491ENSJJAG00000023415Cpsf310096.491Jaculus_jaculus
ENSCPOG00000011299CPSF39985.125ENSKMAG00000002806cpsf39885.125Kryptolebias_marmoratus
ENSCPOG00000011299CPSF39988.088ENSKMAG00000007317CPSF39888.088Kryptolebias_marmoratus
ENSCPOG00000011299CPSF39979.706ENSLBEG00000020569cpsf39479.706Labrus_bergylta
ENSCPOG00000011299CPSF35580.161ENSLBEG00000015018-9980.161Labrus_bergylta
ENSCPOG00000011299CPSF39588.889ENSLBEG00000013492CPSF39888.889Labrus_bergylta
ENSCPOG00000011299CPSF39983.211ENSLACG00000008308CPSF39883.211Latimeria_chalumnae
ENSCPOG00000011299CPSF39988.546ENSLOCG00000016823cpsf39888.546Lepisosteus_oculatus
ENSCPOG00000011299CPSF39996.176ENSLAFG00000009467CPSF310096.176Loxodonta_africana
ENSCPOG00000011299CPSF310097.807ENSMFAG00000001339CPSF310097.807Macaca_fascicularis
ENSCPOG00000011299CPSF39597.682ENSMMUG00000018038CPSF310097.682Macaca_mulatta
ENSCPOG00000011299CPSF310085.088ENSMNEG00000039447CPSF310085.088Macaca_nemestrina
ENSCPOG00000011299CPSF310097.953ENSMLEG00000026825CPSF310097.953Mandrillus_leucophaeus
ENSCPOG00000011299CPSF39285.443ENSMAMG00000008835CPSF39985.443Mastacembelus_armatus
ENSCPOG00000011299CPSF39985.714ENSMAMG00000003076cpsf39885.714Mastacembelus_armatus
ENSCPOG00000011299CPSF39985.903ENSMZEG00005014358cpsf39985.903Maylandia_zebra
ENSCPOG00000011299CPSF39988.824ENSMZEG00005006258CPSF39888.824Maylandia_zebra
ENSCPOG00000011299CPSF39894.153ENSMGAG00000013995CPSF310094.153Meleagris_gallopavo
ENSCPOG00000011299CPSF35594.415ENSMAUG00000000166Cpsf310094.415Mesocricetus_auratus
ENSCPOG00000011299CPSF310092.544ENSMICG00000002363CPSF310092.544Microcebus_murinus
ENSCPOG00000011299CPSF310093.129ENSMOCG00000020067Cpsf310093.129Microtus_ochrogaster
ENSCPOG00000011299CPSF39482.171ENSMMOG00000018212CPSF39882.171Mola_mola
ENSCPOG00000011299CPSF38071.779ENSMMOG00000011923CPSF38477.857Mola_mola
ENSCPOG00000011299CPSF310095.080ENSMODG00000014703CPSF310095.080Monodelphis_domestica
ENSCPOG00000011299CPSF39986.050ENSMALG00000016416cpsf39986.050Monopterus_albus
ENSCPOG00000011299CPSF39383.438ENSMALG00000011474CPSF39983.438Monopterus_albus
ENSCPOG00000011299CPSF310097.222MGP_CAROLIEiJ_G0017640Cpsf310097.222Mus_caroli
ENSCPOG00000011299CPSF310097.222ENSMUSG00000054309Cpsf310097.222Mus_musculus
ENSCPOG00000011299CPSF310097.076MGP_PahariEiJ_G0029397Cpsf310097.076Mus_pahari
ENSCPOG00000011299CPSF310097.222MGP_SPRETEiJ_G0018481Cpsf310097.222Mus_spretus
ENSCPOG00000011299CPSF310097.368ENSMPUG00000013213CPSF310097.368Mustela_putorius_furo
ENSCPOG00000011299CPSF310097.226ENSMLUG00000010636CPSF310097.226Myotis_lucifugus
ENSCPOG00000011299CPSF310097.222ENSNGAG00000019836Cpsf310097.222Nannospalax_galili
ENSCPOG00000011299CPSF39985.463ENSNBRG00000004770cpsf39985.463Neolamprologus_brichardi
ENSCPOG00000011299CPSF39286.667ENSNBRG00000010525CPSF39986.667Neolamprologus_brichardi
ENSCPOG00000011299CPSF310097.807ENSNLEG00000013359CPSF310097.807Nomascus_leucogenys
ENSCPOG00000011299CPSF310064.181ENSMEUG00000013117-10064.181Notamacropus_eugenii
ENSCPOG00000011299CPSF310088.158ENSOPRG00000008902CPSF310088.158Ochotona_princeps
ENSCPOG00000011299CPSF310098.684ENSODEG00000003129CPSF310098.684Octodon_degus
ENSCPOG00000011299CPSF39986.197ENSONIG00000018812cpsf39986.197Oreochromis_niloticus
ENSCPOG00000011299CPSF38295.213ENSOANG00000008577CPSF310095.213Ornithorhynchus_anatinus
ENSCPOG00000011299CPSF310097.515ENSOCUG00000003728CPSF310097.515Oryctolagus_cuniculus
ENSCPOG00000011299CPSF39983.700ENSORLG00000018854cpsf39983.700Oryzias_latipes
ENSCPOG00000011299CPSF39983.847ENSORLG00020013331cpsf39983.847Oryzias_latipes_hni
ENSCPOG00000011299CPSF39983.700ENSORLG00015011017cpsf39983.700Oryzias_latipes_hsok
ENSCPOG00000011299CPSF39983.847ENSOMEG00000010647cpsf39483.847Oryzias_melastigma
ENSCPOG00000011299CPSF310087.865ENSOGAG00000001680CPSF310087.865Otolemur_garnettii
ENSCPOG00000011299CPSF310098.099ENSOARG00000015073CPSF310098.099Ovis_aries
ENSCPOG00000011299CPSF310097.953ENSPPAG00000042457CPSF310097.953Pan_paniscus
ENSCPOG00000011299CPSF310097.807ENSPPRG00000016790CPSF310097.807Panthera_pardus
ENSCPOG00000011299CPSF39997.794ENSPTIG00000003920CPSF310097.638Panthera_tigris_altaica
ENSCPOG00000011299CPSF310097.953ENSPTRG00000011638CPSF310097.953Pan_troglodytes
ENSCPOG00000011299CPSF310097.661ENSPANG00000016798CPSF310097.661Papio_anubis
ENSCPOG00000011299CPSF39989.265ENSPKIG00000023646cpsf39988.992Paramormyrops_kingsleyae
ENSCPOG00000011299CPSF39992.972ENSPSIG00000016144CPSF310092.972Pelodiscus_sinensis
ENSCPOG00000011299CPSF38385.515ENSPMGG00000006141-9985.515Periophthalmus_magnuspinnatus
ENSCPOG00000011299CPSF35979.259ENSPMGG00000015311CPSF39979.259Periophthalmus_magnuspinnatus
ENSCPOG00000011299CPSF310097.076ENSPEMG00000017668Cpsf310097.076Peromyscus_maniculatus_bairdii
ENSCPOG00000011299CPSF37890.317ENSPMAG00000004841cpsf39990.317Petromyzon_marinus
ENSCPOG00000011299CPSF39896.402ENSPCIG00000009823CPSF39896.626Phascolarctos_cinereus
ENSCPOG00000011299CPSF39984.604ENSPFOG00000015922cpsf39984.604Poecilia_formosa
ENSCPOG00000011299CPSF39987.923ENSPFOG00000010418-9887.923Poecilia_formosa
ENSCPOG00000011299CPSF39984.604ENSPLAG00000000882cpsf39984.604Poecilia_latipinna
ENSCPOG00000011299CPSF35980.941ENSPLAG00000021300-9980.941Poecilia_latipinna
ENSCPOG00000011299CPSF39984.751ENSPMEG00000018309cpsf39984.751Poecilia_mexicana
ENSCPOG00000011299CPSF39983.063ENSPREG00000004482CPSF39883.063Poecilia_reticulata
ENSCPOG00000011299CPSF39282.353ENSPREG00000014875cpsf39982.353Poecilia_reticulata
ENSCPOG00000011299CPSF310093.421ENSPPYG00000012666CPSF310093.421Pongo_abelii
ENSCPOG00000011299CPSF39563.134ENSPCAG00000015042CPSF310063.134Procavia_capensis
ENSCPOG00000011299CPSF39088.215ENSPCOG00000023016CPSF310088.215Propithecus_coquereli
ENSCPOG00000011299CPSF39997.801ENSPVAG00000005324CPSF39997.801Pteropus_vampyrus
ENSCPOG00000011299CPSF39985.903ENSPNYG00000004405cpsf39985.903Pundamilia_nyererei
ENSCPOG00000011299CPSF37991.513ENSPNYG00000021047CPSF39091.513Pundamilia_nyererei
ENSCPOG00000011299CPSF39987.647ENSPNAG00000023060cpsf39887.647Pygocentrus_nattereri
ENSCPOG00000011299CPSF39997.214ENSRNOG00000052418Cpsf39997.214Rattus_norvegicus
ENSCPOG00000011299CPSF310091.959ENSRBIG00000041615CPSF39993.199Rhinopithecus_bieti
ENSCPOG00000011299CPSF310097.953ENSRROG00000033792CPSF310097.953Rhinopithecus_roxellana
ENSCPOG00000011299CPSF39340.403YLR277CYSH19540.403Saccharomyces_cerevisiae
ENSCPOG00000011299CPSF310091.594ENSSBOG00000027263CPSF310091.594Saimiri_boliviensis_boliviensis
ENSCPOG00000011299CPSF310096.637ENSSHAG00000007024CPSF310096.637Sarcophilus_harrisii
ENSCPOG00000011299CPSF39989.134ENSSFOG00015002108cpsf39989.134Scleropages_formosus
ENSCPOG00000011299CPSF39587.519ENSSMAG00000020534CPSF39587.519Scophthalmus_maximus
ENSCPOG00000011299CPSF39988.382ENSSDUG00000018498CPSF39888.382Seriola_dumerili
ENSCPOG00000011299CPSF39986.197ENSSDUG00000002828cpsf39686.197Seriola_dumerili
ENSCPOG00000011299CPSF39986.197ENSSLDG00000008469cpsf39687.781Seriola_lalandi_dorsalis
ENSCPOG00000011299CPSF39988.382ENSSLDG00000005234CPSF39888.382Seriola_lalandi_dorsalis
ENSCPOG00000011299CPSF310080.409ENSSARG00000005186CPSF310080.409Sorex_araneus
ENSCPOG00000011299CPSF39891.207ENSSPUG00000015525CPSF39791.207Sphenodon_punctatus
ENSCPOG00000011299CPSF39986.009ENSSPAG00000018579cpsf39886.009Stegastes_partitus
ENSCPOG00000011299CPSF39988.088ENSSPAG00000002906CPSF39888.088Stegastes_partitus
ENSCPOG00000011299CPSF39998.097ENSSSCG00000020799CPSF39998.097Sus_scrofa
ENSCPOG00000011299CPSF39994.126ENSTGUG00000013016CPSF39994.126Taeniopygia_guttata
ENSCPOG00000011299CPSF35972.482ENSTRUG00000013905CPSF39972.482Takifugu_rubripes
ENSCPOG00000011299CPSF39985.147ENSTRUG00000007030cpsf39785.147Takifugu_rubripes
ENSCPOG00000011299CPSF38593.699ENSTBEG00000002707CPSF38593.699Tupaia_belangeri
ENSCPOG00000011299CPSF38893.548ENSTTRG00000000861CPSF38893.548Tursiops_truncatus
ENSCPOG00000011299CPSF39698.021ENSUAMG00000007535CPSF39498.021Ursus_americanus
ENSCPOG00000011299CPSF39597.836ENSUMAG00000003676CPSF310097.836Ursus_maritimus
ENSCPOG00000011299CPSF39395.268ENSVPAG00000008041CPSF310095.268Vicugna_pacos
ENSCPOG00000011299CPSF310097.953ENSVVUG00000002194CPSF310097.953Vulpes_vulpes
ENSCPOG00000011299CPSF39989.721ENSXETG00000008263cpsf39889.721Xenopus_tropicalis
ENSCPOG00000011299CPSF35479.245ENSXCOG00000000957-8779.245Xiphophorus_couchianus
ENSCPOG00000011299CPSF39984.897ENSXCOG00000019695cpsf39984.897Xiphophorus_couchianus
ENSCPOG00000011299CPSF39987.923ENSXMAG00000027291CPSF39887.923Xiphophorus_maculatus
ENSCPOG00000011299CPSF39984.457ENSXMAG00000009784cpsf39984.457Xiphophorus_maculatus

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