EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011314 (Gene tree)
Gene ID: 100723769
Gene Symbol: RBFOX1
Alias: A2BP1|FOX-1|HRNBP1
Full Name: RNA binding fox-1 homolog 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 561405 bases
Position: chrDS562859.1:26499913-27061317
Accession: 100723769
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010173	Fox-1_C	PF12414.8	1e-42	1	1
ENSCPOP00000029564	Fox-1_C	PF12414.8	1.1e-42	1	1
ENSCPOP00000024157	Fox-1_C	PF12414.8	1.2e-40	1	1
ENSCPOP00000024157	RRM_1	PF00076.22	2.7e-18	1	1
ENSCPOP00000010173	RRM_1	PF00076.22	2.8e-18	1	1
ENSCPOP00000029564	RRM_1	PF00076.22	2.8e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000039484	RBFOX1-201	1194	XM_013142028	ENSCPOP00000029564	397 (aa)	XP_012997482	A0A286XW96
ENSCPOT00000046626	RBFOX1-202	4111	XM_013142023	ENSCPOP00000024157	418 (aa)	XP_012997477	A0A286XFB1
ENSCPOT00000011420	RBFOX1-203	1179	-	ENSCPOP00000010173	392 (aa)	-	H0VIW7

Gene Model

Click here to download ENSCPOG00000011314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011314	RBFOX1	93	58.173	ENSCPOG00000021703	RBFOX3	100	61.637
ENSCPOG00000011314	RBFOX1	99	62.654	ENSCPOG00000022180	RBFOX2	99	60.294

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011314	RBFOX1	100	98.237	ENSG00000078328	RBFOX1	100	98.237	Homo_sapiens
ENSCPOG00000011314	RBFOX1	100	76.145	ENSAPOG00000003197	rbfox1	100	76.627	Acanthochromis_polyacanthus
ENSCPOG00000011314	RBFOX1	60	94.400	ENSAMEG00000008605	RBFOX1	100	94.400	Ailuropoda_melanoleuca
ENSCPOG00000011314	RBFOX1	68	64.865	ENSACIG00000005478	rbfox1	68	65.320	Amphilophus_citrinellus
ENSCPOG00000011314	RBFOX1	74	70.645	ENSAOCG00000008283	rbfox1	97	70.323	Amphiprion_ocellaris
ENSCPOG00000011314	RBFOX1	96	71.693	ENSAPEG00000010636	rbfox1	100	71.579	Amphiprion_percula
ENSCPOG00000011314	RBFOX1	74	69.579	ENSATEG00000007513	rbfox1	97	69.132	Anabas_testudineus
ENSCPOG00000011314	RBFOX1	99	93.590	ENSAPLG00000013263	RBFOX1	98	93.590	Anas_platyrhynchos
ENSCPOG00000011314	RBFOX1	99	86.990	ENSACAG00000004013	RBFOX1	100	85.965	Anolis_carolinensis
ENSCPOG00000011314	RBFOX1	100	95.420	ENSANAG00000029527	RBFOX1	98	98.205	Aotus_nancymaae
ENSCPOG00000011314	RBFOX1	57	86.547	ENSAMXG00000002431	rbfox1	72	78.656	Astyanax_mexicanus
ENSCPOG00000011314	RBFOX1	100	95.420	ENSBTAG00000007210	RBFOX1	98	98.205	Bos_taurus
ENSCPOG00000011314	RBFOX1	100	97.368	ENSCJAG00000017351	RBFOX1	100	97.368	Callithrix_jacchus
ENSCPOG00000011314	RBFOX1	100	97.608	ENSCAFG00000019082	RBFOX1	100	97.608	Canis_familiaris
ENSCPOG00000011314	RBFOX1	71	97.297	ENSCAFG00020024881	RBFOX1	83	97.297	Canis_lupus_dingo
ENSCPOG00000011314	RBFOX1	100	95.420	ENSCHIG00000023549	RBFOX1	98	98.205	Capra_hircus
ENSCPOG00000011314	RBFOX1	99	95.887	ENSTSYG00000005334	RBFOX1	100	97.943	Carlito_syrichta
ENSCPOG00000011314	RBFOX1	100	100.000	ENSCAPG00000017669	RBFOX1	100	100.000	Cavia_aperea
ENSCPOG00000011314	RBFOX1	100	97.368	ENSCCAG00000023031	RBFOX1	100	97.368	Cebus_capucinus
ENSCPOG00000011314	RBFOX1	100	97.368	ENSCATG00000033816	RBFOX1	100	97.368	Cercocebus_atys
ENSCPOG00000011314	RBFOX1	100	99.522	ENSCLAG00000012761	RBFOX1	100	99.522	Chinchilla_lanigera
ENSCPOG00000011314	RBFOX1	85	95.509	ENSCSAG00000008739	RBFOX1	89	95.509	Chlorocebus_sabaeus
ENSCPOG00000011314	RBFOX1	100	75.837	ENSCHOG00000012843	RBFOX1	100	75.837	Choloepus_hoffmanni
ENSCPOG00000011314	RBFOX1	99	94.072	ENSCPBG00000026626	RBFOX1	98	93.846	Chrysemys_picta_bellii
ENSCPOG00000011314	RBFOX1	100	97.368	ENSCANG00000033125	RBFOX1	100	97.368	Colobus_angolensis_palliatus
ENSCPOG00000011314	RBFOX1	100	97.229	ENSCGRG00001013729	Rbfox1	100	97.229	Cricetulus_griseus_chok1gshd
ENSCPOG00000011314	RBFOX1	100	97.229	ENSCGRG00000003272	Rbfox1	100	97.229	Cricetulus_griseus_crigri
ENSCPOG00000011314	RBFOX1	96	71.537	ENSCSEG00000008840	rbfox1	100	71.537	Cynoglossus_semilaevis
ENSCPOG00000011314	RBFOX1	100	80.407	ENSDARG00000014746	rbfox1	100	86.341	Danio_rerio
ENSCPOG00000011314	RBFOX1	100	97.194	ENSDNOG00000043612	RBFOX1	94	97.949	Dasypus_novemcinctus
ENSCPOG00000011314	RBFOX1	100	94.684	ENSDORG00000010024	Rbfox1	100	93.317	Dipodomys_ordii
ENSCPOG00000011314	RBFOX1	100	78.230	ENSETEG00000003771	RBFOX1	100	78.230	Echinops_telfairi
ENSCPOG00000011314	RBFOX1	99	98.715	ENSEASG00005011599	RBFOX1	98	98.974	Equus_asinus_asinus
ENSCPOG00000011314	RBFOX1	99	96.923	ENSECAG00000012667	RBFOX1	98	98.272	Equus_caballus
ENSCPOG00000011314	RBFOX1	83	67.816	ENSELUG00000013096	rbfox1	97	67.816	Esox_lucius
ENSCPOG00000011314	RBFOX1	99	97.943	ENSFCAG00000025322	RBFOX1	96	91.148	Felis_catus
ENSCPOG00000011314	RBFOX1	82	93.808	ENSFALG00000004027	RBFOX1	100	91.892	Ficedula_albicollis
ENSCPOG00000011314	RBFOX1	100	99.522	ENSFDAG00000007388	RBFOX1	100	99.522	Fukomys_damarensis
ENSCPOG00000011314	RBFOX1	100	92.105	ENSGALG00000034325	RBFOX1	100	92.105	Gallus_gallus
ENSCPOG00000011314	RBFOX1	100	91.388	ENSGAGG00000023681	RBFOX1	100	94.164	Gopherus_agassizii
ENSCPOG00000011314	RBFOX1	100	97.368	ENSGGOG00000016871	-	100	97.368	Gorilla_gorilla
ENSCPOG00000011314	RBFOX1	100	99.282	ENSHGLG00000016944	RBFOX1	100	99.282	Heterocephalus_glaber_female
ENSCPOG00000011314	RBFOX1	100	99.282	ENSHGLG00100003272	RBFOX1	100	99.282	Heterocephalus_glaber_male
ENSCPOG00000011314	RBFOX1	86	70.893	ENSHCOG00000016419	rbfox1	91	70.977	Hippocampus_comes
ENSCPOG00000011314	RBFOX1	96	83.289	ENSIPUG00000015215	rbfox1	100	83.289	Ictalurus_punctatus
ENSCPOG00000011314	RBFOX1	100	97.733	ENSSTOG00000000322	RBFOX1	100	97.733	Ictidomys_tridecemlineatus
ENSCPOG00000011314	RBFOX1	100	94.207	ENSJJAG00000002575	Rbfox1	100	94.207	Jaculus_jaculus
ENSCPOG00000011314	RBFOX1	99	73.485	ENSLBEG00000014659	rbfox1	99	73.201	Labrus_bergylta
ENSCPOG00000011314	RBFOX1	99	85.751	ENSLOCG00000006675	rbfox1	99	86.005	Lepisosteus_oculatus
ENSCPOG00000011314	RBFOX1	78	98.377	ENSLAFG00000011480	RBFOX1	100	98.701	Loxodonta_africana
ENSCPOG00000011314	RBFOX1	100	97.129	ENSMFAG00000036447	RBFOX1	100	97.129	Macaca_fascicularis
ENSCPOG00000011314	RBFOX1	100	97.129	ENSMMUG00000003458	RBFOX1	100	97.129	Macaca_mulatta
ENSCPOG00000011314	RBFOX1	100	97.129	ENSMNEG00000032034	RBFOX1	100	97.129	Macaca_nemestrina
ENSCPOG00000011314	RBFOX1	100	97.368	ENSMLEG00000015382	RBFOX1	100	97.368	Mandrillus_leucophaeus
ENSCPOG00000011314	RBFOX1	96	75.000	ENSMAMG00000003142	rbfox1	100	75.510	Mastacembelus_armatus
ENSCPOG00000011314	RBFOX1	72	87.324	ENSMGAG00000008606	RBFOX1	96	87.143	Meleagris_gallopavo
ENSCPOG00000011314	RBFOX1	99	56.818	ENSMAUG00000020570	Rbfox1	99	55.808	Mesocricetus_auratus
ENSCPOG00000011314	RBFOX1	99	90.513	ENSMICG00000034286	RBFOX1	100	88.834	Microcebus_murinus
ENSCPOG00000011314	RBFOX1	100	97.481	ENSMOCG00000020932	Rbfox1	100	97.481	Microtus_ochrogaster
ENSCPOG00000011314	RBFOX1	88	71.304	ENSMMOG00000009716	rbfox1	86	71.681	Mola_mola
ENSCPOG00000011314	RBFOX1	81	94.357	ENSMODG00000005826	RBFOX1	90	94.357	Monodelphis_domestica
ENSCPOG00000011314	RBFOX1	100	76.039	ENSMALG00000003337	rbfox1	100	76.039	Monopterus_albus
ENSCPOG00000011314	RBFOX1	100	97.481	MGP_CAROLIEiJ_G0020427	Rbfox1	100	97.481	Mus_caroli
ENSCPOG00000011314	RBFOX1	100	97.229	ENSMUSG00000008658	Rbfox1	100	99.248	Mus_musculus
ENSCPOG00000011314	RBFOX1	100	97.481	MGP_PahariEiJ_G0016135	Rbfox1	100	97.481	Mus_pahari
ENSCPOG00000011314	RBFOX1	100	96.977	MGP_SPRETEiJ_G0021321	Rbfox1	100	96.977	Mus_spretus
ENSCPOG00000011314	RBFOX1	85	95.783	ENSMPUG00000014822	RBFOX1	91	93.333	Mustela_putorius_furo
ENSCPOG00000011314	RBFOX1	78	99.023	ENSMLUG00000015896	RBFOX1	100	99.023	Myotis_lucifugus
ENSCPOG00000011314	RBFOX1	100	97.368	ENSNGAG00000023276	Rbfox1	100	97.938	Nannospalax_galili
ENSCPOG00000011314	RBFOX1	99	60.723	ENSNBRG00000011084	rbfox1	94	61.259	Neolamprologus_brichardi
ENSCPOG00000011314	RBFOX1	100	97.129	ENSNLEG00000010017	-	100	97.129	Nomascus_leucogenys
ENSCPOG00000011314	RBFOX1	100	79.665	ENSMEUG00000012525	RBFOX1	100	79.665	Notamacropus_eugenii
ENSCPOG00000011314	RBFOX1	100	79.187	ENSOPRG00000006199	-	100	77.990	Ochotona_princeps
ENSCPOG00000011314	RBFOX1	100	98.565	ENSODEG00000013166	RBFOX1	100	98.565	Octodon_degus
ENSCPOG00000011314	RBFOX1	85	93.114	ENSOANG00000002379	RBFOX1	89	93.114	Ornithorhynchus_anatinus
ENSCPOG00000011314	RBFOX1	56	96.818	ENSOCUG00000001205	-	98	96.818	Oryctolagus_cuniculus
ENSCPOG00000011314	RBFOX1	100	97.449	ENSOGAG00000025535	RBFOX1	100	96.474	Otolemur_garnettii
ENSCPOG00000011314	RBFOX1	63	85.714	ENSOARG00000005135	RBFOX1	100	84.462	Ovis_aries
ENSCPOG00000011314	RBFOX1	99	98.196	ENSPPAG00000036238	-	100	98.196	Pan_paniscus
ENSCPOG00000011314	RBFOX1	100	97.368	ENSPPRG00000006546	RBFOX1	100	97.368	Panthera_pardus
ENSCPOG00000011314	RBFOX1	99	87.113	ENSPTIG00000021154	RBFOX1	99	86.340	Panthera_tigris_altaica
ENSCPOG00000011314	RBFOX1	100	97.368	ENSPTRG00000007744	RBFOX1	100	97.368	Pan_troglodytes
ENSCPOG00000011314	RBFOX1	100	97.368	ENSPANG00000026500	RBFOX1	100	97.368	Papio_anubis
ENSCPOG00000011314	RBFOX1	75	81.973	ENSPKIG00000019353	rbfox1	87	81.973	Paramormyrops_kingsleyae
ENSCPOG00000011314	RBFOX1	100	81.203	ENSPKIG00000009667	-	95	82.609	Paramormyrops_kingsleyae
ENSCPOG00000011314	RBFOX1	100	93.367	ENSPSIG00000006523	RBFOX1	98	93.367	Pelodiscus_sinensis
ENSCPOG00000011314	RBFOX1	100	97.481	ENSPEMG00000017607	Rbfox1	100	97.481	Peromyscus_maniculatus_bairdii
ENSCPOG00000011314	RBFOX1	74	92.069	ENSPCIG00000026887	RBFOX1	100	92.069	Phascolarctos_cinereus
ENSCPOG00000011314	RBFOX1	85	95.783	ENSPPYG00000007079	-	91	93.333	Pongo_abelii
ENSCPOG00000011314	RBFOX1	90	88.095	ENSPCAG00000002630	RBFOX1	100	88.095	Procavia_capensis
ENSCPOG00000011314	RBFOX1	100	97.368	ENSPCOG00000025687	RBFOX1	100	97.368	Propithecus_coquereli
ENSCPOG00000011314	RBFOX1	100	93.780	ENSPVAG00000013467	RBFOX1	100	93.780	Pteropus_vampyrus
ENSCPOG00000011314	RBFOX1	96	80.303	ENSPNAG00000023109	rbfox1	100	80.303	Pygocentrus_nattereri
ENSCPOG00000011314	RBFOX1	99	96.667	ENSRNOG00000002827	Rbfox1	100	94.737	Rattus_norvegicus
ENSCPOG00000011314	RBFOX1	99	98.196	ENSRBIG00000044478	RBFOX1	100	98.196	Rhinopithecus_bieti
ENSCPOG00000011314	RBFOX1	100	97.368	ENSRROG00000044411	RBFOX1	100	97.368	Rhinopithecus_roxellana
ENSCPOG00000011314	RBFOX1	100	97.449	ENSSBOG00000033726	RBFOX1	98	97.449	Saimiri_boliviensis_boliviensis
ENSCPOG00000011314	RBFOX1	99	93.041	ENSSHAG00000009257	RBFOX1	100	91.688	Sarcophilus_harrisii
ENSCPOG00000011314	RBFOX1	100	68.182	ENSSFOG00015023675	rbfox1	93	87.826	Scleropages_formosus
ENSCPOG00000011314	RBFOX1	90	69.444	ENSSFOG00015009955	-	87	68.182	Scleropages_formosus
ENSCPOG00000011314	RBFOX1	99	77.094	ENSSMAG00000015505	rbfox1	96	73.460	Scophthalmus_maximus
ENSCPOG00000011314	RBFOX1	100	73.990	ENSSDUG00000016413	rbfox1	99	74.490	Seriola_dumerili
ENSCPOG00000011314	RBFOX1	86	72.647	ENSSLDG00000009353	rbfox1	97	72.321	Seriola_lalandi_dorsalis
ENSCPOG00000011314	RBFOX1	86	81.765	ENSSPUG00000009732	RBFOX1	87	81.818	Sphenodon_punctatus
ENSCPOG00000011314	RBFOX1	99	76.355	ENSSPAG00000009723	rbfox1	100	76.108	Stegastes_partitus
ENSCPOG00000011314	RBFOX1	97	97.284	ENSSSCG00000007917	RBFOX1	98	97.284	Sus_scrofa
ENSCPOG00000011314	RBFOX1	99	94.087	ENSTGUG00000004562	RBFOX1	100	94.087	Taeniopygia_guttata
ENSCPOG00000011314	RBFOX1	100	75.550	ENSTRUG00000020940	rbfox1	100	75.550	Takifugu_rubripes
ENSCPOG00000011314	RBFOX1	68	57.325	ENSTNIG00000002567	rbfox1	100	58.917	Tetraodon_nigroviridis
ENSCPOG00000011314	RBFOX1	81	82.759	ENSTBEG00000009169	-	81	82.759	Tupaia_belangeri
ENSCPOG00000011314	RBFOX1	100	97.368	ENSTTRG00000005700	RBFOX1	100	97.368	Tursiops_truncatus
ENSCPOG00000011314	RBFOX1	100	92.132	ENSUAMG00000024633	RBFOX1	100	92.132	Ursus_americanus
ENSCPOG00000011314	RBFOX1	100	83.503	ENSUMAG00000003579	RBFOX1	100	83.503	Ursus_maritimus
ENSCPOG00000011314	RBFOX1	81	98.701	ENSVPAG00000001284	RBFOX1	81	98.701	Vicugna_pacos
ENSCPOG00000011314	RBFOX1	99	97.943	ENSVVUG00000017311	RBFOX1	96	91.148	Vulpes_vulpes