EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000011329 (Gene tree)
Gene ID: -
Gene Symbol: YBX3
Alias: CSDA|CSDA1|ZONAB|dbpA
Full Name: Y-box-binding protein 3
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 19900 bases
Position: chrDS562883.1:3241991-3261890
Accession: 100721154
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000024783	CSD	PF00313.22	3.1e-26	1	1
ENSCPOP00000010185	CSD	PF00313.22	4.4e-26	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011435	YBX3-201	1020	XM_005003910	ENSCPOP00000010185	339 (aa)	XP_005003967	H0VIX9
ENSCPOT00000038635	YBX3-202	813	-	ENSCPOP00000024783	270 (aa)	-	A0A286XH32

Gene Model

Click here to download ENSCPOG00000011329's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011329's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011329	YBX3	86	87.713	ENSG00000060138	YBX3	91	97.619	Homo_sapiens
ENSCPOG00000011329	YBX3	85	91.349	ENSAMEG00000009393	YBX3	83	91.379	Ailuropoda_melanoleuca
ENSCPOG00000011329	YBX3	84	68.056	ENSAPLG00000003147	YBX3	100	68.056	Anas_platyrhynchos
ENSCPOG00000011329	YBX3	83	66.087	ENSANAG00000033366	-	64	85.484	Aotus_nancymaae
ENSCPOG00000011329	YBX3	86	87.713	ENSANAG00000024492	-	93	87.713	Aotus_nancymaae
ENSCPOG00000011329	YBX3	94	88.013	ENSBTAG00000009663	YBX3	77	87.329	Bos_taurus
ENSCPOG00000011329	YBX3	86	87.713	ENSCJAG00000021660	-	79	87.713	Callithrix_jacchus
ENSCPOG00000011329	YBX3	98	63.774	ENSCJAG00000033824	-	70	83.333	Callithrix_jacchus
ENSCPOG00000011329	YBX3	85	89.547	ENSCAFG00000013401	YBX3	100	93.088	Canis_familiaris
ENSCPOG00000011329	YBX3	86	86.986	ENSCAFG00020006412	YBX3	78	87.031	Canis_lupus_dingo
ENSCPOG00000011329	YBX3	94	87.382	ENSCHIG00000010863	YBX3	82	89.726	Capra_hircus
ENSCPOG00000011329	YBX3	83	81.696	ENSTSYG00000035821	-	72	95.745	Carlito_syrichta
ENSCPOG00000011329	YBX3	84	88.153	ENSTSYG00000004204	-	88	88.153	Carlito_syrichta
ENSCPOG00000011329	YBX3	84	99.301	ENSCAPG00000015039	YBX3	93	99.301	Cavia_aperea
ENSCPOG00000011329	YBX3	83	90.625	ENSCCAG00000016469	YBX3	79	87.372	Cebus_capucinus
ENSCPOG00000011329	YBX3	86	87.031	ENSCATG00000034411	YBX3	79	87.031	Cercocebus_atys
ENSCPOG00000011329	YBX3	84	95.804	ENSCLAG00000016030	YBX3	94	95.804	Chinchilla_lanigera
ENSCPOG00000011329	YBX3	86	87.372	ENSCSAG00000008744	YBX3	79	87.372	Chlorocebus_sabaeus
ENSCPOG00000011329	YBX3	81	84.545	ENSCPBG00000014147	YBX3	70	95.699	Chrysemys_picta_bellii
ENSCPOG00000011329	YBX3	86	88.055	ENSCANG00000036801	YBX3	91	90.625	Colobus_angolensis_palliatus
ENSCPOG00000011329	YBX3	90	89.754	ENSCGRG00001016148	Ybx3	80	89.384	Cricetulus_griseus_chok1gshd
ENSCPOG00000011329	YBX3	84	87.629	ENSCGRG00000004563	Ybx3	98	87.629	Cricetulus_griseus_crigri
ENSCPOG00000011329	YBX3	100	77.247	ENSDORG00000009103	Ybx3	81	89.161	Dipodomys_ordii
ENSCPOG00000011329	YBX3	83	79.577	ENSETEG00000002557	YBX3	99	78.169	Echinops_telfairi
ENSCPOG00000011329	YBX3	86	84.932	ENSEASG00005014726	YBX3	78	84.932	Equus_asinus_asinus
ENSCPOG00000011329	YBX3	86	88.014	ENSECAG00000013777	YBX3	79	88.014	Equus_caballus
ENSCPOG00000011329	YBX3	83	86.972	ENSEEUG00000010415	YBX3	100	87.324	Erinaceus_europaeus
ENSCPOG00000011329	YBX3	86	88.396	ENSFCAG00000027748	YBX3	78	88.396	Felis_catus
ENSCPOG00000011329	YBX3	80	94.444	ENSFALG00000003661	YBX3	100	62.369	Ficedula_albicollis
ENSCPOG00000011329	YBX3	84	89.510	ENSFDAG00000021192	YBX3	92	89.510	Fukomys_damarensis
ENSCPOG00000011329	YBX3	81	83.105	ENSGALG00000031890	YBX3	76	82.432	Gallus_gallus
ENSCPOG00000011329	YBX3	81	85.000	ENSGAGG00000017780	YBX3	69	98.925	Gopherus_agassizii
ENSCPOG00000011329	YBX3	86	87.713	ENSGGOG00000001352	YBX3	79	87.713	Gorilla_gorilla
ENSCPOG00000011329	YBX3	80	83.516	ENSHGLG00000015495	-	80	81.618	Heterocephalus_glaber_female
ENSCPOG00000011329	YBX3	89	81.699	ENSHGLG00000014798	-	87	82.492	Heterocephalus_glaber_female
ENSCPOG00000011329	YBX3	80	96.330	ENSHGLG00100003589	YBX3	87	96.330	Heterocephalus_glaber_male
ENSCPOG00000011329	YBX3	86	84.247	ENSSTOG00000032577	-	83	84.932	Ictidomys_tridecemlineatus
ENSCPOG00000011329	YBX3	84	82.168	ENSSTOG00000002108	-	88	82.168	Ictidomys_tridecemlineatus
ENSCPOG00000011329	YBX3	86	68.136	ENSJJAG00000014239	Ybx3	95	86.207	Jaculus_jaculus
ENSCPOG00000011329	YBX3	86	89.726	ENSLAFG00000017247	YBX3	87	84.589	Loxodonta_africana
ENSCPOG00000011329	YBX3	86	87.372	ENSMFAG00000039369	YBX3	79	87.372	Macaca_fascicularis
ENSCPOG00000011329	YBX3	86	87.372	ENSMMUG00000022469	YBX3	90	87.372	Macaca_mulatta
ENSCPOG00000011329	YBX3	86	87.372	ENSMNEG00000045109	YBX3	79	87.372	Macaca_nemestrina
ENSCPOG00000011329	YBX3	84	88.462	ENSMLEG00000033618	YBX3	81	88.462	Mandrillus_leucophaeus
ENSCPOG00000011329	YBX3	78	98.095	ENSMGAG00000014224	YBX3	100	82.407	Meleagris_gallopavo
ENSCPOG00000011329	YBX3	94	86.435	ENSMAUG00000012185	Ybx3	91	89.041	Mesocricetus_auratus
ENSCPOG00000011329	YBX3	100	69.231	ENSMICG00000031459	-	78	76.682	Microcebus_murinus
ENSCPOG00000011329	YBX3	86	91.781	ENSMICG00000038002	-	79	91.781	Microcebus_murinus
ENSCPOG00000011329	YBX3	86	91.416	ENSMOCG00000016291	Ybx3	86	100.000	Microtus_ochrogaster
ENSCPOG00000011329	YBX3	84	83.566	ENSMODG00000018248	YBX3	85	85.019	Monodelphis_domestica
ENSCPOG00000011329	YBX3	90	89.754	MGP_CAROLIEiJ_G0028947	Ybx3	81	89.078	Mus_caroli
ENSCPOG00000011329	YBX3	92	87.540	ENSMUSG00000030189	Ybx3	81	89.078	Mus_musculus
ENSCPOG00000011329	YBX3	92	88.179	MGP_PahariEiJ_G0022709	Ybx3	81	89.761	Mus_pahari
ENSCPOG00000011329	YBX3	92	87.859	MGP_SPRETEiJ_G0029994	Ybx3	81	89.420	Mus_spretus
ENSCPOG00000011329	YBX3	86	72.425	ENSMPUG00000011810	YBX3	79	71.523	Mustela_putorius_furo
ENSCPOG00000011329	YBX3	78	88.104	ENSMLUG00000007476	YBX3	100	85.874	Myotis_lucifugus
ENSCPOG00000011329	YBX3	86	82.712	ENSNGAG00000000710	Ybx3	91	83.186	Nannospalax_galili
ENSCPOG00000011329	YBX3	86	85.324	ENSNLEG00000034844	YBX3	83	83.618	Nomascus_leucogenys
ENSCPOG00000011329	YBX3	51	75.145	ENSMEUG00000002507	-	81	75.145	Notamacropus_eugenii
ENSCPOG00000011329	YBX3	94	89.062	ENSODEG00000017957	YBX3	86	90.785	Octodon_degus
ENSCPOG00000011329	YBX3	86	84.300	ENSOCUG00000001889	YBX3	85	84.300	Oryctolagus_cuniculus
ENSCPOG00000011329	YBX3	88	96.850	ENSOGAG00000013245	YBX3	80	88.667	Otolemur_garnettii
ENSCPOG00000011329	YBX3	76	100.000	ENSOARG00000020919	YBX3	99	81.293	Ovis_aries
ENSCPOG00000011329	YBX3	86	87.713	ENSPPAG00000039068	YBX3	82	87.713	Pan_paniscus
ENSCPOG00000011329	YBX3	86	88.396	ENSPPRG00000005859	YBX3	78	88.396	Panthera_pardus
ENSCPOG00000011329	YBX3	84	90.141	ENSPTIG00000005322	YBX3	81	89.860	Panthera_tigris_altaica
ENSCPOG00000011329	YBX3	86	87.713	ENSPTRG00000004681	YBX3	78	87.713	Pan_troglodytes
ENSCPOG00000011329	YBX3	86	87.031	ENSPANG00000010280	YBX3	79	87.031	Papio_anubis
ENSCPOG00000011329	YBX3	80	85.116	ENSPSIG00000009247	YBX3	90	100.000	Pelodiscus_sinensis
ENSCPOG00000011329	YBX3	94	86.435	ENSPEMG00000012132	-	92	89.041	Peromyscus_maniculatus_bairdii
ENSCPOG00000011329	YBX3	90	89.344	ENSPEMG00000010391	-	77	100.000	Peromyscus_maniculatus_bairdii
ENSCPOG00000011329	YBX3	76	79.923	ENSPCIG00000029949	YBX3	93	82.427	Phascolarctos_cinereus
ENSCPOG00000011329	YBX3	86	87.372	ENSPPYG00000004279	YBX3	79	87.372	Pongo_abelii
ENSCPOG00000011329	YBX3	63	92.019	ENSPCAG00000001397	YBX3	72	91.787	Procavia_capensis
ENSCPOG00000011329	YBX3	53	86.740	ENSPCOG00000011663	YBX3	70	86.740	Propithecus_coquereli
ENSCPOG00000011329	YBX3	92	76.115	ENSPVAG00000006740	YBX3	55	92.754	Pteropus_vampyrus
ENSCPOG00000011329	YBX3	92	87.859	ENSRNOG00000005480	Ybx3	80	89.726	Rattus_norvegicus
ENSCPOG00000011329	YBX3	86	87.372	ENSRBIG00000039208	YBX3	79	87.372	Rhinopithecus_bieti
ENSCPOG00000011329	YBX3	86	87.372	ENSRROG00000029638	YBX3	79	87.372	Rhinopithecus_roxellana
ENSCPOG00000011329	YBX3	89	86.379	ENSSBOG00000030573	YBX3	83	89.161	Saimiri_boliviensis_boliviensis
ENSCPOG00000011329	YBX3	73	98.837	ENSSHAG00000003262	YBX3	98	77.320	Sarcophilus_harrisii
ENSCPOG00000011329	YBX3	51	90.647	ENSSPUG00000009911	-	66	88.489	Sphenodon_punctatus
ENSCPOG00000011329	YBX3	85	89.310	ENSSSCG00000000633	YBX3	77	89.420	Sus_scrofa
ENSCPOG00000011329	YBX3	79	97.143	ENSTGUG00000012047	YBX3	75	97.143	Taeniopygia_guttata
ENSCPOG00000011329	YBX3	91	85.065	ENSTBEG00000012570	YBX3	81	87.415	Tupaia_belangeri
ENSCPOG00000011329	YBX3	77	81.203	ENSTTRG00000008045	YBX3	100	80.827	Tursiops_truncatus
ENSCPOG00000011329	YBX3	82	87.365	ENSUAMG00000016662	YBX3	100	87.365	Ursus_americanus
ENSCPOG00000011329	YBX3	84	90.845	ENSUMAG00000016118	YBX3	94	90.559	Ursus_maritimus
ENSCPOG00000011329	YBX3	64	100.000	ENSVPAG00000000876	YBX3	100	67.368	Vicugna_pacos
ENSCPOG00000011329	YBX3	82	85.560	ENSVVUG00000004956	YBX3	100	85.921	Vulpes_vulpes
ENSCPOG00000011329	YBX3	81	73.303	ENSXETG00000016239	ybx3	69	77.457	Xenopus_tropicalis