EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011394 (Gene tree)
Gene ID: 100719265
Gene Symbol: SAFB2
Alias: KIAA0138
Full Name: scaffold attachment factor B2
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 21928 bases
Position: chrDS563189.1:69855-91782
Accession: 100719265
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010241	RRM_1	PF00076.22	1.3e-13	1	1
ENSCPOP00000010241	SAP	PF02037.27	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011500	SAFB2-201	2853	XM_013146315	ENSCPOP00000010241	950 (aa)	XP_013001769	H0VJ28

Gene Model

Click here to download ENSCPOG00000011394's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011394's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011394	SAFB2	65	66.872	ENSCPOG00000026322	SAFB	100	62.249

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011394	SAFB2	100	79.226	ENSG00000130254	SAFB2	100	79.124	Homo_sapiens
ENSCPOG00000011394	SAFB2	100	78.106	ENSAMEG00000012146	SAFB2	100	77.902	Ailuropoda_melanoleuca
ENSCPOG00000011394	SAFB2	100	79.918	ENSANAG00000031936	SAFB2	100	79.816	Aotus_nancymaae
ENSCPOG00000011394	SAFB2	100	73.904	ENSBTAG00000001790	SAFB2	99	74.247	Bos_taurus
ENSCPOG00000011394	SAFB2	100	79.103	ENSCAFG00000018814	SAFB2	100	78.899	Canis_familiaris
ENSCPOG00000011394	SAFB2	100	78.921	ENSCAFG00020018939	SAFB2	100	78.717	Canis_lupus_dingo
ENSCPOG00000011394	SAFB2	100	73.469	ENSCHIG00000024547	SAFB2	100	73.571	Capra_hircus
ENSCPOG00000011394	SAFB2	93	81.969	ENSCAPG00000011771	SAFB2	100	83.315	Cavia_aperea
ENSCPOG00000011394	SAFB2	100	78.791	ENSCCAG00000017348	SAFB2	100	78.791	Cebus_capucinus
ENSCPOG00000011394	SAFB2	100	78.769	ENSCATG00000039497	SAFB2	100	78.667	Cercocebus_atys
ENSCPOG00000011394	SAFB2	100	79.022	ENSCSAG00000009959	SAFB2	100	78.921	Chlorocebus_sabaeus
ENSCPOG00000011394	SAFB2	74	65.761	ENSCHOG00000010684	SAFB2	100	65.761	Choloepus_hoffmanni
ENSCPOG00000011394	SAFB2	100	76.844	ENSCANG00000024675	SAFB2	100	76.302	Colobus_angolensis_palliatus
ENSCPOG00000011394	SAFB2	100	67.793	ENSCGRG00001015833	Safb2	100	67.296	Cricetulus_griseus_chok1gshd
ENSCPOG00000011394	SAFB2	100	67.793	ENSCGRG00000011131	Safb2	100	67.296	Cricetulus_griseus_crigri
ENSCPOG00000011394	SAFB2	95	71.975	ENSDORG00000016199	Safb2	100	71.975	Dipodomys_ordii
ENSCPOG00000011394	SAFB2	86	76.112	ENSEASG00005022952	SAFB2	89	76.174	Equus_asinus_asinus
ENSCPOG00000011394	SAFB2	96	76.352	ENSECAG00000018978	SAFB2	100	76.344	Equus_caballus
ENSCPOG00000011394	SAFB2	100	77.880	ENSFCAG00000011834	SAFB2	100	77.982	Felis_catus
ENSCPOG00000011394	SAFB2	93	77.607	ENSFDAG00000020009	SAFB2	95	77.778	Fukomys_damarensis
ENSCPOG00000011394	SAFB2	100	75.405	ENSGGOG00000015093	SAFB2	100	74.494	Gorilla_gorilla
ENSCPOG00000011394	SAFB2	100	83.809	ENSHGLG00000017442	SAFB2	100	83.707	Heterocephalus_glaber_female
ENSCPOG00000011394	SAFB2	98	74.383	ENSLAFG00000003836	SAFB2	99	73.375	Loxodonta_africana
ENSCPOG00000011394	SAFB2	100	79.508	ENSMFAG00000039706	SAFB2	100	79.406	Macaca_fascicularis
ENSCPOG00000011394	SAFB2	100	79.816	ENSMMUG00000017968	SAFB2	100	79.713	Macaca_mulatta
ENSCPOG00000011394	SAFB2	100	73.834	ENSMNEG00000032042	SAFB2	100	73.333	Macaca_nemestrina
ENSCPOG00000011394	SAFB2	100	79.713	ENSMLEG00000034562	SAFB2	100	79.611	Mandrillus_leucophaeus
ENSCPOG00000011394	SAFB2	84	74.216	ENSMAUG00000011573	Safb2	92	74.686	Mesocricetus_auratus
ENSCPOG00000011394	SAFB2	100	78.230	ENSMICG00000008711	SAFB2	100	78.411	Microcebus_murinus
ENSCPOG00000011394	SAFB2	100	67.300	ENSMOCG00000006827	Safb2	100	66.600	Microtus_ochrogaster
ENSCPOG00000011394	SAFB2	98	65.222	ENSMODG00000001178	SAFB2	100	64.545	Monodelphis_domestica
ENSCPOG00000011394	SAFB2	100	68.645	MGP_CAROLIEiJ_G0021779	Safb2	100	68.150	Mus_caroli
ENSCPOG00000011394	SAFB2	100	68.645	ENSMUSG00000042625	Safb2	100	68.348	Mus_musculus
ENSCPOG00000011394	SAFB2	100	67.260	MGP_PahariEiJ_G0020768	Safb2	99	66.901	Mus_pahari
ENSCPOG00000011394	SAFB2	91	69.041	MGP_SPRETEiJ_G0022690	Safb2	98	68.795	Mus_spretus
ENSCPOG00000011394	SAFB2	100	78.106	ENSMPUG00000006106	SAFB2	93	78.106	Mustela_putorius_furo
ENSCPOG00000011394	SAFB2	100	73.992	ENSMLUG00000001050	SAFB2	100	73.205	Myotis_lucifugus
ENSCPOG00000011394	SAFB2	100	79.205	ENSNLEG00000013514	SAFB2	100	79.103	Nomascus_leucogenys
ENSCPOG00000011394	SAFB2	93	61.915	ENSMEUG00000002456	SAFB2	100	61.480	Notamacropus_eugenii
ENSCPOG00000011394	SAFB2	100	71.066	ENSOPRG00000011523	-	100	71.066	Ochotona_princeps
ENSCPOG00000011394	SAFB2	100	79.778	ENSODEG00000014751	SAFB2	100	79.676	Octodon_degus
ENSCPOG00000011394	SAFB2	100	77.495	ENSOGAG00000006855	SAFB2	100	77.291	Otolemur_garnettii
ENSCPOG00000011394	SAFB2	97	64.884	ENSOARG00000007982	SAFB2	67	71.870	Ovis_aries
ENSCPOG00000011394	SAFB2	100	79.715	ENSPPAG00000043392	SAFB2	100	79.613	Pan_paniscus
ENSCPOG00000011394	SAFB2	100	78.186	ENSPPRG00000011310	SAFB2	100	78.287	Panthera_pardus
ENSCPOG00000011394	SAFB2	81	75.926	ENSPTIG00000015120	SAFB2	90	77.315	Panthera_tigris_altaica
ENSCPOG00000011394	SAFB2	100	74.796	ENSPTRG00000010334	SAFB2	100	74.462	Pan_troglodytes
ENSCPOG00000011394	SAFB2	100	79.406	ENSPANG00000007004	SAFB2	100	79.508	Papio_anubis
ENSCPOG00000011394	SAFB2	100	65.678	ENSPEMG00000016015	Safb2	100	65.183	Peromyscus_maniculatus_bairdii
ENSCPOG00000011394	SAFB2	64	73.191	ENSPCIG00000009518	-	99	76.015	Phascolarctos_cinereus
ENSCPOG00000011394	SAFB2	100	79.124	ENSPPYG00000009427	SAFB2	100	79.022	Pongo_abelii
ENSCPOG00000011394	SAFB2	100	72.811	ENSPCAG00000006352	SAFB2	99	73.520	Procavia_capensis
ENSCPOG00000011394	SAFB2	100	76.224	ENSPCOG00000023260	SAFB2	100	76.122	Propithecus_coquereli
ENSCPOG00000011394	SAFB2	60	78.261	ENSPVAG00000004902	-	61	78.261	Pteropus_vampyrus
ENSCPOG00000011394	SAFB2	81	68.402	ENSRNOG00000049511	AABR07066522.1	99	66.102	Rattus_norvegicus
ENSCPOG00000011394	SAFB2	82	89.161	ENSRBIG00000033446	SAFB2	99	89.161	Rhinopithecus_bieti
ENSCPOG00000011394	SAFB2	100	79.816	ENSRROG00000006606	SAFB2	100	79.713	Rhinopithecus_roxellana
ENSCPOG00000011394	SAFB2	100	79.201	ENSSBOG00000032315	SAFB2	100	79.098	Saimiri_boliviensis_boliviensis
ENSCPOG00000011394	SAFB2	97	65.474	ENSSHAG00000012703	SAFB2	99	63.897	Sarcophilus_harrisii
ENSCPOG00000011394	SAFB2	81	65.081	ENSSARG00000000649	SAFB2	100	65.081	Sorex_araneus
ENSCPOG00000011394	SAFB2	100	77.495	ENSSSCG00000013523	SAFB2	100	77.699	Sus_scrofa
ENSCPOG00000011394	SAFB2	78	67.269	ENSTBEG00000012709	SAFB2	86	66.727	Tupaia_belangeri
ENSCPOG00000011394	SAFB2	93	70.978	ENSTTRG00000013585	SAFB2	93	70.652	Tursiops_truncatus
ENSCPOG00000011394	SAFB2	98	79.375	ENSUAMG00000024695	SAFB2	97	79.167	Ursus_americanus
ENSCPOG00000011394	SAFB2	84	75.205	ENSUMAG00000009585	SAFB2	88	74.877	Ursus_maritimus
ENSCPOG00000011394	SAFB2	74	85.864	ENSVPAG00000012041	SAFB2	89	85.864	Vicugna_pacos
ENSCPOG00000011394	SAFB2	100	79.328	ENSVVUG00000013695	SAFB2	100	78.921	Vulpes_vulpes