EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000011443 (Gene tree)
Gene ID: 100729827
Gene Symbol: SHQ1
Alias: FLJ10539|Shq1p
Full Name: SHQ1%2C H/ACA ribonucleoprotein assembly factor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 122964 bases
Position: chrDS562871.1:24722398-24845361
Accession: 100729827
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010287	SHQ1	PF04925.15	1.3e-69	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011549	SHQ1-201	3992	XM_003473366	ENSCPOP00000010287	585 (aa)	XP_003473414	H0VJ68

Gene Model

Click here to download ENSCPOG00000011443's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011443's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011443	SHQ1	99	77.797	ENSG00000144736	SHQ1	100	90.000	Homo_sapiens
ENSCPOG00000011443	SHQ1	98	51.986	ENSAPOG00000000397	shq1	92	53.195	Acanthochromis_polyacanthus
ENSCPOG00000011443	SHQ1	99	77.265	ENSAMEG00000015140	SHQ1	99	77.265	Ailuropoda_melanoleuca
ENSCPOG00000011443	SHQ1	74	60.369	ENSACIG00000021249	shq1	92	52.273	Amphilophus_citrinellus
ENSCPOG00000011443	SHQ1	74	62.385	ENSAOCG00000023311	shq1	91	53.701	Amphiprion_ocellaris
ENSCPOG00000011443	SHQ1	96	54.035	ENSAPEG00000021686	shq1	91	53.380	Amphiprion_percula
ENSCPOG00000011443	SHQ1	74	61.697	ENSATEG00000008475	shq1	71	61.239	Anabas_testudineus
ENSCPOG00000011443	SHQ1	76	66.741	ENSAPLG00000013926	SHQ1	89	66.887	Anas_platyrhynchos
ENSCPOG00000011443	SHQ1	98	58.014	ENSACAG00000014809	SHQ1	84	59.107	Anolis_carolinensis
ENSCPOG00000011443	SHQ1	97	60.035	ENSANAG00000030500	-	98	57.692	Aotus_nancymaae
ENSCPOG00000011443	SHQ1	98	78.313	ENSANAG00000029241	SHQ1	98	76.724	Aotus_nancymaae
ENSCPOG00000011443	SHQ1	74	59.954	ENSACLG00000023077	shq1	94	47.326	Astatotilapia_calliptera
ENSCPOG00000011443	SHQ1	74	54.630	ENSAMXG00000043822	shq1	77	53.642	Astyanax_mexicanus
ENSCPOG00000011443	SHQ1	99	74.957	ENSBTAG00000005436	SHQ1	99	74.873	Bos_taurus
ENSCPOG00000011443	SHQ1	73	34.773	WBGene00021655	Y48A5A.1	92	33.886	Caenorhabditis_elegans
ENSCPOG00000011443	SHQ1	99	75.000	ENSCJAG00000015131	SHQ1	99	74.830	Callithrix_jacchus
ENSCPOG00000011443	SHQ1	99	76.410	ENSCAFG00000006434	SHQ1	98	77.265	Canis_familiaris
ENSCPOG00000011443	SHQ1	99	76.239	ENSCAFG00020016743	SHQ1	98	77.094	Canis_lupus_dingo
ENSCPOG00000011443	SHQ1	99	75.170	ENSCHIG00000012271	SHQ1	90	75.722	Capra_hircus
ENSCPOG00000011443	SHQ1	99	72.061	ENSTSYG00000014439	SHQ1	99	71.891	Carlito_syrichta
ENSCPOG00000011443	SHQ1	92	80.633	ENSCAPG00000009343	SHQ1	100	91.379	Cavia_aperea
ENSCPOG00000011443	SHQ1	98	67.753	ENSCCAG00000027080	SHQ1	98	67.581	Cebus_capucinus
ENSCPOG00000011443	SHQ1	97	60.733	ENSCCAG00000036087	-	97	59.686	Cebus_capucinus
ENSCPOG00000011443	SHQ1	99	76.661	ENSCATG00000041238	SHQ1	99	76.491	Cercocebus_atys
ENSCPOG00000011443	SHQ1	100	85.324	ENSCLAG00000004206	SHQ1	100	83.447	Chinchilla_lanigera
ENSCPOG00000011443	SHQ1	84	72.745	ENSCSAG00000011514	SHQ1	99	72.545	Chlorocebus_sabaeus
ENSCPOG00000011443	SHQ1	50	95.000	ENSCHOG00000003273	-	84	95.000	Choloepus_hoffmanni
ENSCPOG00000011443	SHQ1	99	60.069	ENSCPBG00000006441	SHQ1	93	60.611	Chrysemys_picta_bellii
ENSCPOG00000011443	SHQ1	71	42.417	ENSCING00000008013	-	90	42.217	Ciona_intestinalis
ENSCPOG00000011443	SHQ1	68	42.857	ENSCSAVG00000002332	-	99	41.986	Ciona_savignyi
ENSCPOG00000011443	SHQ1	99	77.891	ENSCANG00000039295	SHQ1	99	76.962	Colobus_angolensis_palliatus
ENSCPOG00000011443	SHQ1	99	73.711	ENSCGRG00001012583	Shq1	98	84.426	Cricetulus_griseus_chok1gshd
ENSCPOG00000011443	SHQ1	99	73.711	ENSCGRG00000009849	Shq1	98	84.426	Cricetulus_griseus_crigri
ENSCPOG00000011443	SHQ1	71	60.671	ENSCSEG00000007829	shq1	90	52.613	Cynoglossus_semilaevis
ENSCPOG00000011443	SHQ1	74	60.550	ENSCVAG00000020049	shq1	96	51.111	Cyprinodon_variegatus
ENSCPOG00000011443	SHQ1	74	57.110	ENSDARG00000058522	shq1	75	55.876	Danio_rerio
ENSCPOG00000011443	SHQ1	99	76.150	ENSDNOG00000033937	SHQ1	99	76.320	Dasypus_novemcinctus
ENSCPOG00000011443	SHQ1	99	63.918	ENSETEG00000005766	SHQ1	99	64.212	Echinops_telfairi
ENSCPOG00000011443	SHQ1	74	45.455	ENSEBUG00000005445	shq1	73	50.000	Eptatretus_burgeri
ENSCPOG00000011443	SHQ1	99	77.740	ENSEASG00005002237	SHQ1	100	77.740	Equus_asinus_asinus
ENSCPOG00000011443	SHQ1	98	77.873	ENSECAG00000015673	SHQ1	96	77.873	Equus_caballus
ENSCPOG00000011443	SHQ1	99	74.530	ENSEEUG00000010568	SHQ1	99	74.872	Erinaceus_europaeus
ENSCPOG00000011443	SHQ1	71	60.241	ENSELUG00000003476	shq1	81	58.355	Esox_lucius
ENSCPOG00000011443	SHQ1	99	77.778	ENSFCAG00000012781	SHQ1	99	76.712	Felis_catus
ENSCPOG00000011443	SHQ1	99	59.897	ENSFALG00000013428	SHQ1	93	59.796	Ficedula_albicollis
ENSCPOG00000011443	SHQ1	100	81.544	ENSFDAG00000005595	SHQ1	92	81.040	Fukomys_damarensis
ENSCPOG00000011443	SHQ1	96	53.004	ENSFHEG00000017552	shq1	93	52.650	Fundulus_heteroclitus
ENSCPOG00000011443	SHQ1	68	57.828	ENSGMOG00000007350	shq1	100	57.828	Gadus_morhua
ENSCPOG00000011443	SHQ1	99	58.448	ENSGALG00000007798	SHQ1	93	58.362	Gallus_gallus
ENSCPOG00000011443	SHQ1	68	59.343	ENSGACG00000011797	shq1	100	59.343	Gasterosteus_aculeatus
ENSCPOG00000011443	SHQ1	99	76.949	ENSGGOG00000034818	SHQ1	99	75.680	Gorilla_gorilla
ENSCPOG00000011443	SHQ1	99	50.424	ENSHBUG00000010857	shq1	94	50.510	Haplochromis_burtoni
ENSCPOG00000011443	SHQ1	100	83.531	ENSHGLG00000003637	SHQ1	91	84.550	Heterocephalus_glaber_female
ENSCPOG00000011443	SHQ1	100	84.668	ENSHGLG00100011957	SHQ1	91	84.668	Heterocephalus_glaber_male
ENSCPOG00000011443	SHQ1	95	50.633	ENSHCOG00000010799	shq1	90	50.452	Hippocampus_comes
ENSCPOG00000011443	SHQ1	74	57.895	ENSIPUG00000001247	shq1	71	57.518	Ictalurus_punctatus
ENSCPOG00000011443	SHQ1	99	70.934	ENSSTOG00000010043	SHQ1	100	71.799	Ictidomys_tridecemlineatus
ENSCPOG00000011443	SHQ1	99	74.099	ENSJJAG00000017611	Shq1	99	84.426	Jaculus_jaculus
ENSCPOG00000011443	SHQ1	96	53.451	ENSKMAG00000004457	shq1	91	53.274	Kryptolebias_marmoratus
ENSCPOG00000011443	SHQ1	99	56.336	ENSLACG00000014243	SHQ1	87	56.336	Latimeria_chalumnae
ENSCPOG00000011443	SHQ1	98	53.859	ENSLOCG00000009970	shq1	98	51.624	Lepisosteus_oculatus
ENSCPOG00000011443	SHQ1	99	56.186	ENSMFAG00000037396	-	99	54.717	Macaca_fascicularis
ENSCPOG00000011443	SHQ1	99	76.831	ENSMFAG00000039148	SHQ1	99	76.661	Macaca_fascicularis
ENSCPOG00000011443	SHQ1	99	56.186	ENSMMUG00000021761	-	99	54.717	Macaca_mulatta
ENSCPOG00000011443	SHQ1	91	75.139	ENSMMUG00000009571	SHQ1	95	74.954	Macaca_mulatta
ENSCPOG00000011443	SHQ1	99	76.831	ENSMNEG00000032667	SHQ1	99	76.661	Macaca_nemestrina
ENSCPOG00000011443	SHQ1	99	76.491	ENSMLEG00000038493	SHQ1	99	76.320	Mandrillus_leucophaeus
ENSCPOG00000011443	SHQ1	96	53.322	ENSMAMG00000023432	shq1	87	53.439	Mastacembelus_armatus
ENSCPOG00000011443	SHQ1	99	50.594	ENSMZEG00005008649	shq1	94	50.680	Maylandia_zebra
ENSCPOG00000011443	SHQ1	99	58.591	ENSMGAG00000009640	SHQ1	93	58.763	Meleagris_gallopavo
ENSCPOG00000011443	SHQ1	99	74.828	ENSMAUG00000022030	Shq1	98	84.426	Mesocricetus_auratus
ENSCPOG00000011443	SHQ1	99	76.271	ENSMICG00000009224	SHQ1	99	75.552	Microcebus_murinus
ENSCPOG00000011443	SHQ1	99	73.162	ENSMOCG00000017836	Shq1	98	83.607	Microtus_ochrogaster
ENSCPOG00000011443	SHQ1	74	59.447	ENSMMOG00000010569	shq1	77	57.549	Mola_mola
ENSCPOG00000011443	SHQ1	95	63.750	ENSMODG00000003926	SHQ1	78	74.600	Monodelphis_domestica
ENSCPOG00000011443	SHQ1	98	53.002	ENSMALG00000008870	shq1	92	53.460	Monopterus_albus
ENSCPOG00000011443	SHQ1	90	83.197	MGP_CAROLIEiJ_G0028689	Shq1	98	83.197	Mus_caroli
ENSCPOG00000011443	SHQ1	99	72.913	ENSMUSG00000035378	Shq1	98	83.197	Mus_musculus
ENSCPOG00000011443	SHQ1	99	73.891	MGP_PahariEiJ_G0022440	Shq1	98	84.426	Mus_pahari
ENSCPOG00000011443	SHQ1	99	73.242	MGP_SPRETEiJ_G0029717	Shq1	98	82.377	Mus_spretus
ENSCPOG00000011443	SHQ1	99	75.897	ENSMPUG00000017006	SHQ1	97	76.752	Mustela_putorius_furo
ENSCPOG00000011443	SHQ1	91	71.298	ENSMLUG00000013539	SHQ1	98	71.298	Myotis_lucifugus
ENSCPOG00000011443	SHQ1	99	66.781	ENSNGAG00000023317	Shq1	99	66.096	Nannospalax_galili
ENSCPOG00000011443	SHQ1	59	58.621	ENSNBRG00000024004	shq1	70	56.712	Neolamprologus_brichardi
ENSCPOG00000011443	SHQ1	99	79.287	ENSNLEG00000002731	SHQ1	99	77.041	Nomascus_leucogenys
ENSCPOG00000011443	SHQ1	71	64.815	ENSMEUG00000009350	-	73	64.815	Notamacropus_eugenii
ENSCPOG00000011443	SHQ1	100	78.328	ENSODEG00000009192	SHQ1	100	88.525	Octodon_degus
ENSCPOG00000011443	SHQ1	74	59.725	ENSONIG00000020264	shq1	94	49.660	Oreochromis_niloticus
ENSCPOG00000011443	SHQ1	99	76.962	ENSOCUG00000016695	SHQ1	99	76.410	Oryctolagus_cuniculus
ENSCPOG00000011443	SHQ1	74	59.491	ENSORLG00000023538	shq1	80	58.427	Oryzias_latipes
ENSCPOG00000011443	SHQ1	74	59.954	ENSORLG00020003697	shq1	79	58.876	Oryzias_latipes_hni
ENSCPOG00000011443	SHQ1	74	59.954	ENSORLG00015021040	shq1	79	58.957	Oryzias_latipes_hsok
ENSCPOG00000011443	SHQ1	74	60.557	ENSOMEG00000001225	shq1	80	59.508	Oryzias_melastigma
ENSCPOG00000011443	SHQ1	99	77.683	ENSOGAG00000003898	SHQ1	100	76.280	Otolemur_garnettii
ENSCPOG00000011443	SHQ1	99	74.155	ENSOARG00000009547	SHQ1	99	74.579	Ovis_aries
ENSCPOG00000011443	SHQ1	99	58.179	ENSPPAG00000043263	-	99	54.941	Pan_paniscus
ENSCPOG00000011443	SHQ1	99	77.797	ENSPPAG00000027714	SHQ1	99	76.531	Pan_paniscus
ENSCPOG00000011443	SHQ1	99	78.291	ENSPPRG00000004769	SHQ1	99	77.226	Panthera_pardus
ENSCPOG00000011443	SHQ1	99	74.315	ENSPTIG00000011478	SHQ1	99	73.242	Panthera_tigris_altaica
ENSCPOG00000011443	SHQ1	99	77.797	ENSPTRG00000015106	SHQ1	99	76.531	Pan_troglodytes
ENSCPOG00000011443	SHQ1	99	57.336	ENSPTRG00000048303	-	99	54.104	Pan_troglodytes
ENSCPOG00000011443	SHQ1	99	75.980	ENSPANG00000002881	SHQ1	99	77.172	Papio_anubis
ENSCPOG00000011443	SHQ1	73	56.944	ENSPKIG00000021517	shq1	72	56.250	Paramormyrops_kingsleyae
ENSCPOG00000011443	SHQ1	99	59.725	ENSPSIG00000005536	SHQ1	93	60.102	Pelodiscus_sinensis
ENSCPOG00000011443	SHQ1	75	57.534	ENSPMGG00000008838	shq1	76	56.416	Periophthalmus_magnuspinnatus
ENSCPOG00000011443	SHQ1	90	84.016	ENSPEMG00000000251	Shq1	98	84.016	Peromyscus_maniculatus_bairdii
ENSCPOG00000011443	SHQ1	75	54.688	ENSPMAG00000005372	shq1	99	55.111	Petromyzon_marinus
ENSCPOG00000011443	SHQ1	74	59.361	ENSPFOG00000003118	shq1	82	58.150	Poecilia_formosa
ENSCPOG00000011443	SHQ1	59	57.061	ENSPMEG00000011076	shq1	79	55.647	Poecilia_mexicana
ENSCPOG00000011443	SHQ1	68	54.545	ENSPREG00000000591	shq1	76	55.556	Poecilia_reticulata
ENSCPOG00000011443	SHQ1	99	77.381	ENSPPYG00000013717	SHQ1	99	76.190	Pongo_abelii
ENSCPOG00000011443	SHQ1	97	75.874	ENSPCAG00000009035	SHQ1	99	75.472	Procavia_capensis
ENSCPOG00000011443	SHQ1	99	75.552	ENSPCOG00000008415	SHQ1	99	76.650	Propithecus_coquereli
ENSCPOG00000011443	SHQ1	99	77.853	ENSPVAG00000017392	SHQ1	99	77.853	Pteropus_vampyrus
ENSCPOG00000011443	SHQ1	74	59.954	ENSPNYG00000003878	shq1	94	48.557	Pundamilia_nyererei
ENSCPOG00000011443	SHQ1	74	58.199	ENSPNAG00000026840	shq1	68	57.279	Pygocentrus_nattereri
ENSCPOG00000011443	SHQ1	99	71.289	ENSRNOG00000005433	Shq1	98	71.173	Rattus_norvegicus
ENSCPOG00000011443	SHQ1	99	73.810	ENSRBIG00000026280	SHQ1	99	72.696	Rhinopithecus_bieti
ENSCPOG00000011443	SHQ1	99	77.551	ENSRROG00000034126	SHQ1	99	76.451	Rhinopithecus_roxellana
ENSCPOG00000011443	SHQ1	99	69.454	ENSSBOG00000021038	SHQ1	99	69.113	Saimiri_boliviensis_boliviensis
ENSCPOG00000011443	SHQ1	96	63.066	ENSSHAG00000015077	SHQ1	98	62.369	Sarcophilus_harrisii
ENSCPOG00000011443	SHQ1	76	62.921	ENSSFOG00015016241	shq1	80	62.921	Scleropages_formosus
ENSCPOG00000011443	SHQ1	96	53.710	ENSSMAG00000016151	shq1	90	53.322	Scophthalmus_maximus
ENSCPOG00000011443	SHQ1	100	51.510	ENSSDUG00000011986	shq1	95	52.196	Seriola_dumerili
ENSCPOG00000011443	SHQ1	100	51.597	ENSSLDG00000013908	shq1	95	52.632	Seriola_lalandi_dorsalis
ENSCPOG00000011443	SHQ1	99	62.607	ENSSARG00000007119	SHQ1	99	60.377	Sorex_araneus
ENSCPOG00000011443	SHQ1	84	56.487	ENSSPUG00000011526	-	90	57.171	Sphenodon_punctatus
ENSCPOG00000011443	SHQ1	99	74.490	ENSSSCG00000011518	SHQ1	99	74.873	Sus_scrofa
ENSCPOG00000011443	SHQ1	99	57.705	ENSTGUG00000009933	SHQ1	99	58.136	Taeniopygia_guttata
ENSCPOG00000011443	SHQ1	96	50.353	ENSTRUG00000009446	shq1	92	50.000	Takifugu_rubripes
ENSCPOG00000011443	SHQ1	71	55.663	ENSTNIG00000007354	shq1	99	54.646	Tetraodon_nigroviridis
ENSCPOG00000011443	SHQ1	69	93.617	ENSTBEG00000011295	SHQ1	79	93.617	Tupaia_belangeri
ENSCPOG00000011443	SHQ1	98	75.130	ENSTTRG00000005320	SHQ1	98	75.387	Tursiops_truncatus
ENSCPOG00000011443	SHQ1	98	75.387	ENSUMAG00000024031	SHQ1	98	75.559	Ursus_maritimus
ENSCPOG00000011443	SHQ1	91	65.804	ENSVPAG00000004880	SHQ1	84	70.996	Vicugna_pacos
ENSCPOG00000011443	SHQ1	99	76.239	ENSVVUG00000013906	SHQ1	98	77.094	Vulpes_vulpes
ENSCPOG00000011443	SHQ1	76	65.837	ENSXETG00000032215	shq1	72	65.688	Xenopus_tropicalis