EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011491 (Gene tree)
Gene ID: 100729671
Gene Symbol: -
Alias: -
Full Name: RAB13%2C member RAS oncogene family
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 4906 bases
Position: chrDS562865.1:14945307-14950212
Accession: 100729671
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000019905	MMR_HSR1	PF01926.23	9.7e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011597	-	1623	XM_003475368	ENSCPOP00000019905	203 (aa)	XP_003475416	H0WA94

Gene Model

Click here to download ENSCPOG00000011491's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011491's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011491	-	79	39.130	ENSCPOG00000008172	RAB22A	83	39.130
ENSCPOG00000011491	-	85	42.775	ENSCPOG00000002472	RAB25	81	42.775
ENSCPOG00000011491	-	83	30.387	ENSCPOG00000031264	RASL11A	74	30.387
ENSCPOG00000011491	-	85	31.034	ENSCPOG00000031743	RHEB	94	31.034
ENSCPOG00000011491	-	67	30.882	ENSCPOG00000006239	ARF5	72	30.882
ENSCPOG00000011491	-	78	30.380	ENSCPOG00000026899	-	69	30.380
ENSCPOG00000011491	-	99	51.485	ENSCPOG00000015437	RAB1A	99	51.485
ENSCPOG00000011491	-	83	30.857	ENSCPOG00000006843	DNAJC27	64	30.857
ENSCPOG00000011491	-	96	43.284	ENSCPOG00000025645	RAB37	90	43.284
ENSCPOG00000011491	-	93	48.947	ENSCPOG00000022689	RAB12	91	49.215
ENSCPOG00000011491	-	81	44.242	ENSCPOG00000036631	RAB14	77	44.242
ENSCPOG00000011491	-	91	42.079	ENSCPOG00000000119	RAB33A	85	42.079
ENSCPOG00000011491	-	79	34.940	ENSCPOG00000039323	RAB24	81	35.542
ENSCPOG00000011491	-	90	47.541	ENSCPOG00000005047	RAB30	89	47.541
ENSCPOG00000011491	-	58	30.579	ENSCPOG00000010678	ARL14	60	30.579
ENSCPOG00000011491	-	83	46.784	ENSCPOG00000039524	RAB39B	80	46.784
ENSCPOG00000011491	-	79	36.810	ENSCPOG00000034906	MRAS	78	36.810
ENSCPOG00000011491	-	78	41.772	ENSCPOG00000038813	RAB6B	76	41.772
ENSCPOG00000011491	-	92	44.920	ENSCPOG00000026575	RAB2B	87	44.920
ENSCPOG00000011491	-	91	34.409	ENSCPOG00000021833	Nras	97	34.409
ENSCPOG00000011491	-	87	42.373	ENSCPOG00000032827	RAB18	85	42.373
ENSCPOG00000011491	-	99	39.024	ENSCPOG00000030742	RAB33B	88	39.024
ENSCPOG00000011491	-	96	35.204	ENSCPOG00000000101	HRAS	98	35.204
ENSCPOG00000011491	-	87	45.455	ENSCPOG00000037599	RAB11A	81	45.455
ENSCPOG00000011491	-	80	38.235	ENSCPOG00000030676	RAB9A	83	38.235
ENSCPOG00000011491	-	83	34.884	ENSCPOG00000000528	RERG	84	34.884
ENSCPOG00000011491	-	87	45.455	ENSCPOG00000030154	RAB11B	81	45.455
ENSCPOG00000011491	-	87	39.894	ENSCPOG00000001449	RAB34	73	39.894
ENSCPOG00000011491	-	86	56.571	ENSCPOG00000014868	RAB1B	87	56.571
ENSCPOG00000011491	-	81	38.824	ENSCPOG00000034570	RAB7A	82	38.824
ENSCPOG00000011491	-	81	38.182	ENSCPOG00000030218	RAB23	69	38.182
ENSCPOG00000011491	-	95	38.860	ENSCPOG00000034818	RAB5B	89	38.860
ENSCPOG00000011491	-	79	39.506	ENSCPOG00000030290	KRAS	95	38.333
ENSCPOG00000011491	-	63	30.496	ENSCPOG00000038193	ARFRP1	68	30.496

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011491	-	99	91.089	ENSG00000143545	RAB13	99	91.089	Homo_sapiens
ENSCPOG00000011491	-	99	75.124	ENSACIG00000008584	rab13	97	75.124	Amphilophus_citrinellus
ENSCPOG00000011491	-	99	90.594	ENSANAG00000030247	-	99	90.594	Aotus_nancymaae
ENSCPOG00000011491	-	99	77.723	ENSAMXG00000030712	rab13	99	77.723	Astyanax_mexicanus
ENSCPOG00000011491	-	100	90.640	ENSBTAG00000017604	RAB13	100	90.640	Bos_taurus
ENSCPOG00000011491	-	80	47.853	WBGene00019317	K02E10.1	75	47.853	Caenorhabditis_elegans
ENSCPOG00000011491	-	93	93.122	ENSCJAG00000009933	-	99	90.594	Callithrix_jacchus
ENSCPOG00000011491	-	100	90.640	ENSCHIG00000022271	-	100	90.640	Capra_hircus
ENSCPOG00000011491	-	99	90.594	ENSCCAG00000028502	-	99	90.594	Cebus_capucinus
ENSCPOG00000011491	-	99	91.089	ENSCATG00000041779	-	99	91.089	Cercocebus_atys
ENSCPOG00000011491	-	99	98.020	ENSCLAG00000006603	-	99	98.020	Chinchilla_lanigera
ENSCPOG00000011491	-	99	91.089	ENSCANG00000036573	-	99	91.089	Colobus_angolensis_palliatus
ENSCPOG00000011491	-	99	89.109	ENSCGRG00001021505	Rab13	99	89.109	Cricetulus_griseus_chok1gshd
ENSCPOG00000011491	-	99	89.109	ENSCGRG00000012126	Rab13	99	89.109	Cricetulus_griseus_crigri
ENSCPOG00000011491	-	99	76.471	ENSCSEG00000002358	rab13	99	76.471	Cynoglossus_semilaevis
ENSCPOG00000011491	-	99	78.218	ENSDARG00000034771	rab13	99	78.218	Danio_rerio
ENSCPOG00000011491	-	99	92.079	ENSDORG00000001591	Rab13	99	92.079	Dipodomys_ordii
ENSCPOG00000011491	-	99	91.584	ENSEASG00005000683	-	99	91.584	Equus_asinus_asinus
ENSCPOG00000011491	-	99	91.584	ENSECAG00000016551	RAB13	99	91.584	Equus_caballus
ENSCPOG00000011491	-	99	87.129	ENSEEUG00000001233	-	99	87.129	Erinaceus_europaeus
ENSCPOG00000011491	-	99	75.980	ENSELUG00000012801	rab13	99	75.980	Esox_lucius
ENSCPOG00000011491	-	99	88.614	ENSFCAG00000045269	-	99	88.614	Felis_catus
ENSCPOG00000011491	-	65	96.970	ENSFDAG00000014469	-	100	96.970	Fukomys_damarensis
ENSCPOG00000011491	-	99	76.733	ENSFHEG00000021221	rab13	95	86.127	Fundulus_heteroclitus
ENSCPOG00000011491	-	99	75.248	ENSGACG00000011925	rab13	99	75.248	Gasterosteus_aculeatus
ENSCPOG00000011491	-	91	86.486	ENSGAGG00000000742	-	99	82.178	Gopherus_agassizii
ENSCPOG00000011491	-	99	91.089	ENSGGOG00000023693	RAB13	99	91.089	Gorilla_gorilla
ENSCPOG00000011491	-	99	93.069	ENSHGLG00000008749	RAB13	99	93.069	Heterocephalus_glaber_female
ENSCPOG00000011491	-	99	93.069	ENSHGLG00100013608	RAB13	99	93.069	Heterocephalus_glaber_male
ENSCPOG00000011491	-	87	85.227	ENSHCOG00000007440	rab13	97	85.227	Hippocampus_comes
ENSCPOG00000011491	-	99	77.000	ENSIPUG00000003199	rab13	99	77.000	Ictalurus_punctatus
ENSCPOG00000011491	-	99	91.584	ENSSTOG00000011222	-	99	91.584	Ictidomys_tridecemlineatus
ENSCPOG00000011491	-	99	92.079	ENSJJAG00000010575	Rab13	99	92.079	Jaculus_jaculus
ENSCPOG00000011491	-	99	75.500	ENSKMAG00000001908	rab13	99	75.500	Kryptolebias_marmoratus
ENSCPOG00000011491	-	99	76.500	ENSLBEG00000026779	rab13	99	76.500	Labrus_bergylta
ENSCPOG00000011491	-	88	75.281	ENSLACG00000008103	-	100	75.281	Latimeria_chalumnae
ENSCPOG00000011491	-	99	91.089	ENSMFAG00000041018	RAB13	99	91.089	Macaca_fascicularis
ENSCPOG00000011491	-	99	91.089	ENSMNEG00000028951	-	99	91.089	Macaca_nemestrina
ENSCPOG00000011491	-	99	91.089	ENSMLEG00000042247	-	99	91.089	Mandrillus_leucophaeus
ENSCPOG00000011491	-	99	75.248	ENSMAMG00000014602	rab13	99	75.248	Mastacembelus_armatus
ENSCPOG00000011491	-	99	88.614	ENSMAUG00000015713	Rab13	99	88.614	Mesocricetus_auratus
ENSCPOG00000011491	-	99	90.099	ENSMICG00000010340	-	99	90.099	Microcebus_murinus
ENSCPOG00000011491	-	99	90.099	ENSMOCG00000021448	Rab13	99	90.099	Microtus_ochrogaster
ENSCPOG00000011491	-	99	88.614	ENSMODG00000017295	-	84	88.614	Monodelphis_domestica
ENSCPOG00000011491	-	99	87.624	MGP_CAROLIEiJ_G0025227	Rab13	99	87.624	Mus_caroli
ENSCPOG00000011491	-	99	87.129	ENSMUSG00000027935	Rab13	99	87.129	Mus_musculus
ENSCPOG00000011491	-	99	87.624	MGP_PahariEiJ_G0026671	Rab13	99	87.624	Mus_pahari
ENSCPOG00000011491	-	99	89.604	ENSNGAG00000010309	Rab13	99	89.604	Nannospalax_galili
ENSCPOG00000011491	-	99	74.257	ENSNBRG00000004124	rab13	99	74.257	Neolamprologus_brichardi
ENSCPOG00000011491	-	99	91.089	ENSNLEG00000028944	-	99	91.089	Nomascus_leucogenys
ENSCPOG00000011491	-	99	87.685	ENSMEUG00000009667	-	99	87.685	Notamacropus_eugenii
ENSCPOG00000011491	-	63	99.213	ENSODEG00000012634	-	100	99.213	Octodon_degus
ENSCPOG00000011491	-	99	95.050	ENSODEG00000010443	-	99	95.050	Octodon_degus
ENSCPOG00000011491	-	99	76.733	ENSONIG00000006340	rab13	99	76.733	Oreochromis_niloticus
ENSCPOG00000011491	-	87	94.350	ENSOCUG00000006286	-	99	94.350	Oryctolagus_cuniculus
ENSCPOG00000011491	-	98	78.894	ENSOMEG00000008210	rab13	99	76.238	Oryzias_melastigma
ENSCPOG00000011491	-	100	88.177	ENSOGAG00000016969	-	100	88.177	Otolemur_garnettii
ENSCPOG00000011491	-	99	91.089	ENSPPAG00000028435	-	99	91.089	Pan_paniscus
ENSCPOG00000011491	-	99	88.614	ENSPPRG00000008865	-	99	88.614	Panthera_pardus
ENSCPOG00000011491	-	99	91.089	ENSPTRG00000001370	RAB13	99	91.089	Pan_troglodytes
ENSCPOG00000011491	-	99	91.089	ENSPANG00000004479	-	99	91.089	Papio_anubis
ENSCPOG00000011491	-	99	76.733	ENSPMGG00000007680	rab13	99	76.733	Periophthalmus_magnuspinnatus
ENSCPOG00000011491	-	53	97.222	ENSPEMG00000017353	-	81	97.222	Peromyscus_maniculatus_bairdii
ENSCPOG00000011491	-	99	88.177	ENSPCIG00000029350	-	99	88.177	Phascolarctos_cinereus
ENSCPOG00000011491	-	85	83.815	ENSPLAG00000005832	RAB13	93	83.815	Poecilia_latipinna
ENSCPOG00000011491	-	90	80.328	ENSPREG00000017567	rab13	99	74.752	Poecilia_reticulata
ENSCPOG00000011491	-	99	91.089	ENSPPYG00000000790	-	99	91.089	Pongo_abelii
ENSCPOG00000011491	-	99	91.089	ENSPCOG00000012189	-	99	91.089	Propithecus_coquereli
ENSCPOG00000011491	-	99	90.099	ENSPVAG00000011095	-	99	90.099	Pteropus_vampyrus
ENSCPOG00000011491	-	88	83.146	ENSPNAG00000004189	rab13	94	83.146	Pygocentrus_nattereri
ENSCPOG00000011491	-	99	88.119	ENSRNOG00000016733	Rab13	99	88.119	Rattus_norvegicus
ENSCPOG00000011491	-	99	90.594	ENSRBIG00000008552	-	99	90.594	Rhinopithecus_bieti
ENSCPOG00000011491	-	99	90.594	ENSRROG00000036885	-	99	90.594	Rhinopithecus_roxellana
ENSCPOG00000011491	-	99	90.594	ENSSBOG00000020342	-	99	90.594	Saimiri_boliviensis_boliviensis
ENSCPOG00000011491	-	99	88.177	ENSSHAG00000011866	-	99	88.177	Sarcophilus_harrisii
ENSCPOG00000011491	-	99	92.079	ENSSSCG00000006564	-	99	92.079	Sus_scrofa
ENSCPOG00000011491	-	99	76.733	ENSTRUG00000024177	rab13	99	76.733	Takifugu_rubripes
ENSCPOG00000011491	-	99	91.584	ENSTBEG00000012734	-	99	91.584	Tupaia_belangeri
ENSCPOG00000011491	-	99	91.584	ENSTTRG00000011183	-	99	91.584	Tursiops_truncatus
ENSCPOG00000011491	-	67	84.444	ENSXETG00000020729	rab13	94	75.316	Xenopus_tropicalis
ENSCPOG00000011491	-	88	80.899	ENSXCOG00000019533	rab13	95	80.899	Xiphophorus_couchianus