EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000011526 (Gene tree)
Gene ID: 100721176
Gene Symbol: CNOT4
Alias: CLONE243|NOT4|NOT4H
Full Name: CCR4-NOT transcription complex subunit 4
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 121951 bases
Position: chrDS562865.1:13181542-13303492
Accession: 100721176
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010368	RRM_1	PF00076.22	7.2e-06	1	1
ENSCPOP00000031513	RRM_1	PF00076.22	8.8e-06	1	1
ENSCPOP00000032228	RRM_1	PF00076.22	1e-05	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000033031	CNOT4-203	1929	-	ENSCPOP00000031513	642 (aa)	-	A0A286Y1D9
ENSCPOT00000040800	CNOT4-202	2133	-	ENSCPOP00000032228	710 (aa)	XP_023423301	A0A286Y3E1
ENSCPOT00000011635	CNOT4-201	2070	XM_013158762	ENSCPOP00000010368	572 (aa)	XP_013014217	H0VJD8

Gene Model

Click here to download ENSCPOG00000011526's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011526's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011526	CNOT4	100	98.442	ENSG00000080802	CNOT4	100	98.442	Homo_sapiens
ENSCPOG00000011526	CNOT4	93	90.566	ENSAPOG00000016272	cnot4a	82	90.566	Acanthochromis_polyacanthus
ENSCPOG00000011526	CNOT4	97	97.101	ENSAMEG00000012081	CNOT4	99	97.059	Ailuropoda_melanoleuca
ENSCPOG00000011526	CNOT4	99	90.566	ENSACIG00000003011	cnot4a	91	90.566	Amphilophus_citrinellus
ENSCPOG00000011526	CNOT4	99	90.566	ENSAOCG00000010792	cnot4a	91	90.566	Amphiprion_ocellaris
ENSCPOG00000011526	CNOT4	99	90.566	ENSAPEG00000004680	cnot4a	91	90.566	Amphiprion_percula
ENSCPOG00000011526	CNOT4	99	90.189	ENSATEG00000017580	cnot4a	91	90.189	Anabas_testudineus
ENSCPOG00000011526	CNOT4	100	88.058	ENSAPLG00000016441	CNOT4	100	88.058	Anas_platyrhynchos
ENSCPOG00000011526	CNOT4	100	87.664	ENSACAG00000011154	CNOT4	100	87.664	Anolis_carolinensis
ENSCPOG00000011526	CNOT4	100	98.252	ENSANAG00000032156	CNOT4	100	98.252	Aotus_nancymaae
ENSCPOG00000011526	CNOT4	99	90.566	ENSACLG00000002514	cnot4a	91	90.566	Astatotilapia_calliptera
ENSCPOG00000011526	CNOT4	100	72.907	ENSAMXG00000001373	cnot4a	100	71.994	Astyanax_mexicanus
ENSCPOG00000011526	CNOT4	100	72.895	ENSAMXG00000011473	cnot4b	100	72.000	Astyanax_mexicanus
ENSCPOG00000011526	CNOT4	100	98.287	ENSBTAG00000017919	CNOT4	100	98.287	Bos_taurus
ENSCPOG00000011526	CNOT4	100	98.252	ENSCJAG00000012532	CNOT4	100	98.252	Callithrix_jacchus
ENSCPOG00000011526	CNOT4	100	98.601	ENSCAFG00000003223	CNOT4	100	98.601	Canis_familiaris
ENSCPOG00000011526	CNOT4	100	98.601	ENSCAFG00020000093	CNOT4	100	98.601	Canis_lupus_dingo
ENSCPOG00000011526	CNOT4	100	98.427	ENSCHIG00000010955	CNOT4	100	98.427	Capra_hircus
ENSCPOG00000011526	CNOT4	100	98.427	ENSTSYG00000000893	CNOT4	100	98.427	Carlito_syrichta
ENSCPOG00000011526	CNOT4	99	99.020	ENSCAPG00000006213	CNOT4	99	99.020	Cavia_aperea
ENSCPOG00000011526	CNOT4	100	98.442	ENSCCAG00000024414	CNOT4	100	98.442	Cebus_capucinus
ENSCPOG00000011526	CNOT4	100	98.442	ENSCATG00000022607	CNOT4	100	98.442	Cercocebus_atys
ENSCPOG00000011526	CNOT4	100	99.577	ENSCLAG00000001857	CNOT4	100	99.577	Chinchilla_lanigera
ENSCPOG00000011526	CNOT4	100	98.169	ENSCSAG00000009096	CNOT4	100	98.169	Chlorocebus_sabaeus
ENSCPOG00000011526	CNOT4	68	99.465	ENSCHOG00000010412	CNOT4	63	99.465	Choloepus_hoffmanni
ENSCPOG00000011526	CNOT4	100	94.811	ENSCPBG00000004959	CNOT4	100	94.811	Chrysemys_picta_bellii
ENSCPOG00000011526	CNOT4	66	69.323	ENSCING00000004364	-	66	69.323	Ciona_intestinalis
ENSCPOG00000011526	CNOT4	100	98.287	ENSCANG00000029319	CNOT4	100	98.287	Colobus_angolensis_palliatus
ENSCPOG00000011526	CNOT4	100	98.131	ENSCGRG00001014651	Cnot4	100	98.131	Cricetulus_griseus_chok1gshd
ENSCPOG00000011526	CNOT4	100	98.131	ENSCGRG00000005727	Cnot4	100	98.131	Cricetulus_griseus_crigri
ENSCPOG00000011526	CNOT4	94	90.566	ENSCSEG00000015080	cnot4a	84	90.566	Cynoglossus_semilaevis
ENSCPOG00000011526	CNOT4	99	90.566	ENSCVAG00000009399	cnot4a	91	90.566	Cyprinodon_variegatus
ENSCPOG00000011526	CNOT4	99	93.962	ENSDARG00000007639	cnot4b	92	92.620	Danio_rerio
ENSCPOG00000011526	CNOT4	100	70.635	ENSDARG00000007045	cnot4a	100	70.130	Danio_rerio
ENSCPOG00000011526	CNOT4	100	96.774	ENSDNOG00000009409	CNOT4	100	96.774	Dasypus_novemcinctus
ENSCPOG00000011526	CNOT4	100	97.819	ENSDORG00000012268	Cnot4	100	97.819	Dipodomys_ordii
ENSCPOG00000011526	CNOT4	100	91.585	ENSETEG00000013407	CNOT4	88	95.082	Echinops_telfairi
ENSCPOG00000011526	CNOT4	100	98.287	ENSEASG00005014430	CNOT4	100	98.287	Equus_asinus_asinus
ENSCPOG00000011526	CNOT4	100	98.287	ENSECAG00000020262	CNOT4	100	98.287	Equus_caballus
ENSCPOG00000011526	CNOT4	100	73.887	ENSELUG00000011540	cnot4b	97	72.113	Esox_lucius
ENSCPOG00000011526	CNOT4	99	90.637	ENSELUG00000008742	cnot4a	90	90.637	Esox_lucius
ENSCPOG00000011526	CNOT4	100	98.601	ENSFCAG00000011904	CNOT4	100	98.601	Felis_catus
ENSCPOG00000011526	CNOT4	100	88.189	ENSFALG00000011194	CNOT4	100	88.189	Ficedula_albicollis
ENSCPOG00000011526	CNOT4	100	98.442	ENSFDAG00000013525	CNOT4	100	98.442	Fukomys_damarensis
ENSCPOG00000011526	CNOT4	100	89.259	ENSFHEG00000006608	cnot4a	91	89.259	Fundulus_heteroclitus
ENSCPOG00000011526	CNOT4	95	59.521	ENSGMOG00000001329	cnot4a	97	60.489	Gadus_morhua
ENSCPOG00000011526	CNOT4	100	94.390	ENSGALG00000011682	CNOT4	100	94.390	Gallus_gallus
ENSCPOG00000011526	CNOT4	100	72.572	ENSGACG00000004276	cnot4a	100	71.102	Gasterosteus_aculeatus
ENSCPOG00000011526	CNOT4	100	94.530	ENSGAGG00000017331	CNOT4	100	94.530	Gopherus_agassizii
ENSCPOG00000011526	CNOT4	92	97.713	ENSGGOG00000000142	CNOT4	99	97.713	Gorilla_gorilla
ENSCPOG00000011526	CNOT4	99	90.566	ENSHBUG00000000027	cnot4a	91	90.566	Haplochromis_burtoni
ENSCPOG00000011526	CNOT4	100	98.442	ENSHGLG00000011533	CNOT4	100	98.442	Heterocephalus_glaber_female
ENSCPOG00000011526	CNOT4	100	97.739	ENSHGLG00100013058	CNOT4	100	97.739	Heterocephalus_glaber_male
ENSCPOG00000011526	CNOT4	98	89.434	ENSHCOG00000015815	cnot4a	91	89.434	Hippocampus_comes
ENSCPOG00000011526	CNOT4	100	84.718	ENSIPUG00000006393	cnot4	100	72.121	Ictalurus_punctatus
ENSCPOG00000011526	CNOT4	100	71.196	ENSIPUG00000016994	cnot4b	100	70.753	Ictalurus_punctatus
ENSCPOG00000011526	CNOT4	100	98.427	ENSSTOG00000007717	CNOT4	100	98.427	Ictidomys_tridecemlineatus
ENSCPOG00000011526	CNOT4	100	98.252	ENSJJAG00000016618	Cnot4	100	98.252	Jaculus_jaculus
ENSCPOG00000011526	CNOT4	100	80.594	ENSJJAG00000019991	-	100	80.594	Jaculus_jaculus
ENSCPOG00000011526	CNOT4	94	90.566	ENSKMAG00000004581	cnot4a	100	72.644	Kryptolebias_marmoratus
ENSCPOG00000011526	CNOT4	99	90.943	ENSLBEG00000009999	cnot4a	91	90.943	Labrus_bergylta
ENSCPOG00000011526	CNOT4	100	83.838	ENSLACG00000002647	CNOT4	99	83.838	Latimeria_chalumnae
ENSCPOG00000011526	CNOT4	100	93.382	ENSLOCG00000016126	cnot4a	92	93.382	Lepisosteus_oculatus
ENSCPOG00000011526	CNOT4	100	96.213	ENSLAFG00000000709	CNOT4	100	96.213	Loxodonta_africana
ENSCPOG00000011526	CNOT4	100	98.442	ENSMFAG00000046349	CNOT4	100	98.442	Macaca_fascicularis
ENSCPOG00000011526	CNOT4	100	98.442	ENSMMUG00000016181	CNOT4	100	98.442	Macaca_mulatta
ENSCPOG00000011526	CNOT4	100	98.252	ENSMNEG00000042164	CNOT4	100	98.252	Macaca_nemestrina
ENSCPOG00000011526	CNOT4	100	98.442	ENSMLEG00000032709	CNOT4	100	98.442	Mandrillus_leucophaeus
ENSCPOG00000011526	CNOT4	99	90.566	ENSMAMG00000023194	cnot4a	91	90.566	Mastacembelus_armatus
ENSCPOG00000011526	CNOT4	99	90.566	ENSMZEG00005007312	cnot4a	91	90.566	Maylandia_zebra
ENSCPOG00000011526	CNOT4	100	88.320	ENSMGAG00000011788	CNOT4	100	88.320	Meleagris_gallopavo
ENSCPOG00000011526	CNOT4	100	97.975	ENSMAUG00000020415	Cnot4	100	97.975	Mesocricetus_auratus
ENSCPOG00000011526	CNOT4	100	98.754	ENSMICG00000001667	CNOT4	100	98.754	Microcebus_murinus
ENSCPOG00000011526	CNOT4	100	97.975	ENSMOCG00000020955	Cnot4	100	97.975	Microtus_ochrogaster
ENSCPOG00000011526	CNOT4	94	76.007	ENSMMOG00000014565	cnot4a	97	74.709	Mola_mola
ENSCPOG00000011526	CNOT4	100	96.197	ENSMODG00000014068	CNOT4	100	96.197	Monodelphis_domestica
ENSCPOG00000011526	CNOT4	93	90.566	ENSMALG00000011662	cnot4a	80	90.566	Monopterus_albus
ENSCPOG00000011526	CNOT4	100	97.735	MGP_CAROLIEiJ_G0028217	Cnot4	100	97.735	Mus_caroli
ENSCPOG00000011526	CNOT4	100	97.902	ENSMUSG00000038784	Cnot4	100	97.902	Mus_musculus
ENSCPOG00000011526	CNOT4	100	97.902	MGP_PahariEiJ_G0021974	Cnot4	100	97.902	Mus_pahari
ENSCPOG00000011526	CNOT4	100	97.552	MGP_SPRETEiJ_G0029216	Cnot4	100	97.552	Mus_spretus
ENSCPOG00000011526	CNOT4	100	98.169	ENSMPUG00000004089	CNOT4	100	98.169	Mustela_putorius_furo
ENSCPOG00000011526	CNOT4	100	98.287	ENSMLUG00000008260	CNOT4	100	98.287	Myotis_lucifugus
ENSCPOG00000011526	CNOT4	100	97.664	ENSNGAG00000015030	Cnot4	100	97.664	Nannospalax_galili
ENSCPOG00000011526	CNOT4	100	71.128	ENSNBRG00000021144	cnot4a	100	70.977	Neolamprologus_brichardi
ENSCPOG00000011526	CNOT4	100	98.131	ENSNLEG00000013352	CNOT4	100	98.131	Nomascus_leucogenys
ENSCPOG00000011526	CNOT4	88	96.962	ENSOPRG00000001023	CNOT4	86	98.361	Ochotona_princeps
ENSCPOG00000011526	CNOT4	100	99.577	ENSODEG00000012975	CNOT4	100	99.577	Octodon_degus
ENSCPOG00000011526	CNOT4	99	90.566	ENSONIG00000008656	cnot4a	91	90.566	Oreochromis_niloticus
ENSCPOG00000011526	CNOT4	100	94.944	ENSOANG00000005006	CNOT4	100	94.944	Ornithorhynchus_anatinus
ENSCPOG00000011526	CNOT4	100	98.028	ENSOCUG00000013448	CNOT4	100	98.028	Oryctolagus_cuniculus
ENSCPOG00000011526	CNOT4	100	72.519	ENSORLG00000003727	cnot4a	91	90.943	Oryzias_latipes
ENSCPOG00000011526	CNOT4	100	72.549	ENSORLG00020015684	cnot4a	91	91.321	Oryzias_latipes_hni
ENSCPOG00000011526	CNOT4	100	72.977	ENSORLG00015008470	cnot4a	91	91.321	Oryzias_latipes_hsok
ENSCPOG00000011526	CNOT4	100	72.061	ENSOMEG00000011084	cnot4a	91	90.943	Oryzias_melastigma
ENSCPOG00000011526	CNOT4	100	97.756	ENSOGAG00000015499	CNOT4	100	97.756	Otolemur_garnettii
ENSCPOG00000011526	CNOT4	100	97.335	ENSOARG00000008803	CNOT4	100	97.335	Ovis_aries
ENSCPOG00000011526	CNOT4	100	98.131	ENSPPAG00000041937	CNOT4	100	98.131	Pan_paniscus
ENSCPOG00000011526	CNOT4	100	98.598	ENSPPRG00000023940	CNOT4	100	98.598	Panthera_pardus
ENSCPOG00000011526	CNOT4	100	98.601	ENSPTIG00000016601	CNOT4	100	98.601	Panthera_tigris_altaica
ENSCPOG00000011526	CNOT4	100	98.287	ENSPTRG00000019727	CNOT4	100	98.287	Pan_troglodytes
ENSCPOG00000011526	CNOT4	100	98.287	ENSPANG00000017724	CNOT4	100	98.287	Papio_anubis
ENSCPOG00000011526	CNOT4	100	72.136	ENSPKIG00000018137	cnot4a	100	71.827	Paramormyrops_kingsleyae
ENSCPOG00000011526	CNOT4	100	86.239	ENSPSIG00000011256	CNOT4	99	93.137	Pelodiscus_sinensis
ENSCPOG00000011526	CNOT4	100	73.193	ENSPMGG00000005671	cnot4a	100	73.042	Periophthalmus_magnuspinnatus
ENSCPOG00000011526	CNOT4	100	97.975	ENSPEMG00000021566	Cnot4	100	97.975	Peromyscus_maniculatus_bairdii
ENSCPOG00000011526	CNOT4	100	95.639	ENSPCIG00000029622	CNOT4	96	95.634	Phascolarctos_cinereus
ENSCPOG00000011526	CNOT4	68	82.508	ENSPFOG00000002228	cnot4a	97	58.232	Poecilia_formosa
ENSCPOG00000011526	CNOT4	100	73.182	ENSPLAG00000001780	cnot4a	100	72.576	Poecilia_latipinna
ENSCPOG00000011526	CNOT4	100	73.182	ENSPMEG00000006852	cnot4a	100	72.576	Poecilia_mexicana
ENSCPOG00000011526	CNOT4	100	71.721	ENSPREG00000008171	cnot4a	100	70.281	Poecilia_reticulata
ENSCPOG00000011526	CNOT4	100	97.887	ENSPPYG00000018026	CNOT4	100	97.887	Pongo_abelii
ENSCPOG00000011526	CNOT4	100	98.601	ENSPCOG00000019907	CNOT4	100	98.601	Propithecus_coquereli
ENSCPOG00000011526	CNOT4	97	95.652	ENSPVAG00000004905	CNOT4	90	95.652	Pteropus_vampyrus
ENSCPOG00000011526	CNOT4	99	90.566	ENSPNYG00000004276	cnot4a	91	90.566	Pundamilia_nyererei
ENSCPOG00000011526	CNOT4	100	93.727	ENSPNAG00000008679	cnot4b	100	74.702	Pygocentrus_nattereri
ENSCPOG00000011526	CNOT4	100	73.010	ENSPNAG00000020433	cnot4a	100	71.995	Pygocentrus_nattereri
ENSCPOG00000011526	CNOT4	100	97.183	ENSRNOG00000010795	Cnot4	100	97.183	Rattus_norvegicus
ENSCPOG00000011526	CNOT4	100	98.442	ENSRBIG00000043977	CNOT4	100	98.442	Rhinopithecus_bieti
ENSCPOG00000011526	CNOT4	100	98.427	ENSSBOG00000020808	CNOT4	100	98.427	Saimiri_boliviensis_boliviensis
ENSCPOG00000011526	CNOT4	100	95.915	ENSSHAG00000013639	CNOT4	100	95.915	Sarcophilus_harrisii
ENSCPOG00000011526	CNOT4	100	73.529	ENSSFOG00015002019	cnot4a	100	73.529	Scleropages_formosus
ENSCPOG00000011526	CNOT4	100	81.905	ENSSFOG00015017285	CNOT4	100	78.395	Scleropages_formosus
ENSCPOG00000011526	CNOT4	99	90.566	ENSSMAG00000008614	cnot4a	91	90.566	Scophthalmus_maximus
ENSCPOG00000011526	CNOT4	100	71.582	ENSSDUG00000018585	cnot4b	100	71.582	Seriola_dumerili
ENSCPOG00000011526	CNOT4	99	90.566	ENSSDUG00000022635	cnot4a	91	90.566	Seriola_dumerili
ENSCPOG00000011526	CNOT4	100	63.725	ENSSLDG00000014347	cnot4b	91	70.330	Seriola_lalandi_dorsalis
ENSCPOG00000011526	CNOT4	99	90.566	ENSSLDG00000015770	cnot4a	91	90.566	Seriola_lalandi_dorsalis
ENSCPOG00000011526	CNOT4	100	95.171	ENSSPUG00000004677	CNOT4	100	95.171	Sphenodon_punctatus
ENSCPOG00000011526	CNOT4	99	90.566	ENSSPAG00000012329	cnot4a	91	90.566	Stegastes_partitus
ENSCPOG00000011526	CNOT4	100	98.442	ENSSSCG00000021354	CNOT4	100	98.442	Sus_scrofa
ENSCPOG00000011526	CNOT4	100	88.320	ENSTGUG00000009161	CNOT4	100	88.320	Taeniopygia_guttata
ENSCPOG00000011526	CNOT4	100	82.508	ENSTRUG00000016861	cnot4a	100	71.880	Takifugu_rubripes
ENSCPOG00000011526	CNOT4	100	70.205	ENSTNIG00000016000	cnot4a	100	69.106	Tetraodon_nigroviridis
ENSCPOG00000011526	CNOT4	94	94.280	ENSTBEG00000002202	CNOT4	86	92.113	Tupaia_belangeri
ENSCPOG00000011526	CNOT4	97	97.106	ENSTTRG00000005122	CNOT4	90	97.106	Tursiops_truncatus
ENSCPOG00000011526	CNOT4	100	98.598	ENSUAMG00000026759	CNOT4	100	98.598	Ursus_americanus
ENSCPOG00000011526	CNOT4	100	97.913	ENSUMAG00000015351	CNOT4	100	97.913	Ursus_maritimus
ENSCPOG00000011526	CNOT4	100	97.975	ENSVVUG00000006200	CNOT4	100	97.975	Vulpes_vulpes
ENSCPOG00000011526	CNOT4	100	98.182	ENSXETG00000010594	cnot4	92	98.519	Xenopus_tropicalis
ENSCPOG00000011526	CNOT4	95	72.000	ENSXCOG00000020824	cnot4a	98	71.210	Xiphophorus_couchianus
ENSCPOG00000011526	CNOT4	99	90.566	ENSXMAG00000016984	cnot4a	91	90.566	Xiphophorus_maculatus