EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011643 (Gene tree)
Gene ID: 100734409
Gene Symbol: -
Alias: -
Full Name: RAD54 homolog B
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 79693 bases
Position: chrDS562855.1:21045723-21125415
Accession: 100734409
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010471	ResIII	PF04851.15	5.8e-13	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011755	-	2806	XM_013144013	ENSCPOP00000010471	901 (aa)	XP_012999467	H0VJN1

Gene Model

Click here to download ENSCPOG00000011643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011643	-	55	31.528	ENSCPOG00000009000	CHD1L	50	31.528
ENSCPOG00000011643	-	61	33.032	ENSCPOG00000013601	SMARCA1	50	35.714
ENSCPOG00000011643	-	64	48.129	ENSCPOG00000006768	RAD54L	76	48.129
ENSCPOG00000011643	-	55	30.147	ENSCPOG00000003043	HELLS	63	30.147
ENSCPOG00000011643	-	65	30.252	ENSCPOG00000002259	SMARCA5	51	30.303

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011643	-	80	88.812	ENSG00000265817	FSBP	99	88.812	Homo_sapiens
ENSCPOG00000011643	-	99	84.912	ENSG00000197275	RAD54B	99	84.912	Homo_sapiens
ENSCPOG00000011643	-	99	82.547	ENSAMEG00000005834	-	100	82.547	Ailuropoda_melanoleuca
ENSCPOG00000011643	-	99	55.921	ENSACIG00000013005	rad54b	99	55.921	Amphilophus_citrinellus
ENSCPOG00000011643	-	99	55.187	ENSAOCG00000008523	rad54b	99	55.187	Amphiprion_ocellaris
ENSCPOG00000011643	-	99	55.127	ENSAPEG00000001673	rad54b	99	55.237	Amphiprion_percula
ENSCPOG00000011643	-	99	54.796	ENSATEG00000001527	rad54b	99	54.757	Anabas_testudineus
ENSCPOG00000011643	-	100	67.784	ENSAPLG00000014366	-	100	67.784	Anas_platyrhynchos
ENSCPOG00000011643	-	89	70.088	ENSACAG00000003671	-	99	70.088	Anolis_carolinensis
ENSCPOG00000011643	-	72	87.172	ENSANAG00000019528	-	99	87.172	Aotus_nancymaae
ENSCPOG00000011643	-	99	55.899	ENSACLG00000007826	rad54b	99	55.788	Astatotilapia_calliptera
ENSCPOG00000011643	-	86	57.868	ENSAMXG00000039985	rad54b	94	57.610	Astyanax_mexicanus
ENSCPOG00000011643	-	99	80.879	ENSBTAG00000000632	RAD54B	100	80.879	Bos_taurus
ENSCPOG00000011643	-	79	35.020	WBGene00013792	Y116A8C.13	85	34.620	Caenorhabditis_elegans
ENSCPOG00000011643	-	99	82.728	ENSCJAG00000000080	-	99	86.878	Callithrix_jacchus
ENSCPOG00000011643	-	99	81.010	ENSCAFG00000009179	RAD54B	99	81.010	Canis_familiaris
ENSCPOG00000011643	-	99	80.681	ENSCAFG00020012084	-	99	80.681	Canis_lupus_dingo
ENSCPOG00000011643	-	99	80.659	ENSCHIG00000008230	-	100	80.659	Capra_hircus
ENSCPOG00000011643	-	99	84.066	ENSTSYG00000013234	-	100	84.066	Carlito_syrichta
ENSCPOG00000011643	-	99	82.728	ENSCCAG00000011754	-	99	86.740	Cebus_capucinus
ENSCPOG00000011643	-	99	84.251	ENSCATG00000030661	-	99	88.260	Cercocebus_atys
ENSCPOG00000011643	-	99	92.044	ENSCLAG00000010476	-	99	92.044	Chinchilla_lanigera
ENSCPOG00000011643	-	99	83.921	ENSCSAG00000012712	-	99	83.921	Chlorocebus_sabaeus
ENSCPOG00000011643	-	99	68.988	ENSCPBG00000003204	-	99	69.412	Chrysemys_picta_bellii
ENSCPOG00000011643	-	99	83.921	ENSCANG00000017939	-	99	87.983	Colobus_angolensis_palliatus
ENSCPOG00000011643	-	99	79.621	ENSCGRG00001020184	Rad54b	99	79.621	Cricetulus_griseus_chok1gshd
ENSCPOG00000011643	-	99	78.396	ENSCGRG00000016752	Rad54b	99	78.396	Cricetulus_griseus_crigri
ENSCPOG00000011643	-	89	57.213	ENSCSEG00000001601	rad54b	96	57.213	Cynoglossus_semilaevis
ENSCPOG00000011643	-	99	57.018	ENSCVAG00000009200	rad54b	99	57.018	Cyprinodon_variegatus
ENSCPOG00000011643	-	99	53.433	ENSDARG00000092134	rad54b	99	60.031	Danio_rerio
ENSCPOG00000011643	-	99	80.571	ENSDNOG00000015535	-	99	80.571	Dasypus_novemcinctus
ENSCPOG00000011643	-	99	83.002	ENSDORG00000002492	Rad54b	100	83.002	Dipodomys_ordii
ENSCPOG00000011643	-	86	79.061	ENSETEG00000010605	-	100	79.061	Echinops_telfairi
ENSCPOG00000011643	-	99	47.178	ENSEBUG00000009104	rad54b	98	47.430	Eptatretus_burgeri
ENSCPOG00000011643	-	97	81.200	ENSEASG00005004021	-	100	81.200	Equus_asinus_asinus
ENSCPOG00000011643	-	99	81.319	ENSECAG00000021949	-	99	81.319	Equus_caballus
ENSCPOG00000011643	-	83	83.851	ENSEEUG00000008056	-	83	83.851	Erinaceus_europaeus
ENSCPOG00000011643	-	99	53.277	ENSELUG00000009287	rad54b	99	53.277	Esox_lucius
ENSCPOG00000011643	-	99	81.998	ENSFCAG00000015513	-	100	86.364	Felis_catus
ENSCPOG00000011643	-	99	67.721	ENSFALG00000005467	-	99	67.721	Ficedula_albicollis
ENSCPOG00000011643	-	99	89.868	ENSFDAG00000020541	-	100	89.868	Fukomys_damarensis
ENSCPOG00000011643	-	87	59.422	ENSFHEG00000014382	rad54b	87	59.422	Fundulus_heteroclitus
ENSCPOG00000011643	-	88	56.522	ENSGMOG00000014774	rad54b	99	56.522	Gadus_morhua
ENSCPOG00000011643	-	100	67.822	ENSGALG00000043597	RAD54B	100	67.822	Gallus_gallus
ENSCPOG00000011643	-	100	55.799	ENSGAFG00000007901	rad54b	100	55.799	Gambusia_affinis
ENSCPOG00000011643	-	99	54.113	ENSGACG00000009128	rad54b	99	54.113	Gasterosteus_aculeatus
ENSCPOG00000011643	-	99	68.668	ENSGAGG00000018747	-	99	68.668	Gopherus_agassizii
ENSCPOG00000011643	-	99	84.692	ENSGGOG00000023516	-	99	84.692	Gorilla_gorilla
ENSCPOG00000011643	-	99	54.915	ENSHBUG00000016017	rad54b	99	54.915	Haplochromis_burtoni
ENSCPOG00000011643	-	99	88.865	ENSHGLG00000008263	RAD54B	99	88.865	Heterocephalus_glaber_female
ENSCPOG00000011643	-	99	88.069	ENSHGLG00100008108	-	99	88.069	Heterocephalus_glaber_male
ENSCPOG00000011643	-	99	53.685	ENSHCOG00000004764	rad54b	98	56.034	Hippocampus_comes
ENSCPOG00000011643	-	99	52.266	ENSIPUG00000018531	rad54b	99	52.266	Ictalurus_punctatus
ENSCPOG00000011643	-	99	83.352	ENSSTOG00000010791	-	99	83.352	Ictidomys_tridecemlineatus
ENSCPOG00000011643	-	99	80.330	ENSJJAG00000010314	Rad54b	100	80.330	Jaculus_jaculus
ENSCPOG00000011643	-	90	57.579	ENSKMAG00000004744	rad54b	95	57.579	Kryptolebias_marmoratus
ENSCPOG00000011643	-	82	68.633	ENSLACG00000000859	-	100	68.633	Latimeria_chalumnae
ENSCPOG00000011643	-	99	58.387	ENSLOCG00000010100	rad54b	97	61.418	Lepisosteus_oculatus
ENSCPOG00000011643	-	90	84.035	ENSLAFG00000015315	-	100	84.035	Loxodonta_africana
ENSCPOG00000011643	-	99	84.141	ENSMFAG00000031629	-	99	88.122	Macaca_fascicularis
ENSCPOG00000011643	-	99	84.141	ENSMMUG00000005659	-	99	84.141	Macaca_mulatta
ENSCPOG00000011643	-	99	84.123	ENSMNEG00000016408	-	99	84.123	Macaca_nemestrina
ENSCPOG00000011643	-	99	84.141	ENSMLEG00000006946	-	99	84.141	Mandrillus_leucophaeus
ENSCPOG00000011643	-	99	55.275	ENSMAMG00000012269	rad54b	99	55.275	Mastacembelus_armatus
ENSCPOG00000011643	-	99	54.915	ENSMZEG00005005281	rad54b	95	60.252	Maylandia_zebra
ENSCPOG00000011643	-	100	67.389	ENSMGAG00000012024	-	100	67.389	Meleagris_gallopavo
ENSCPOG00000011643	-	99	77.358	ENSMAUG00000013586	Rad54b	100	77.358	Mesocricetus_auratus
ENSCPOG00000011643	-	99	81.354	ENSMICG00000000754	-	99	81.354	Microcebus_murinus
ENSCPOG00000011643	-	100	76.940	ENSMOCG00000020035	Rad54b	100	76.940	Microtus_ochrogaster
ENSCPOG00000011643	-	99	54.796	ENSMMOG00000003394	rad54b	99	53.963	Mola_mola
ENSCPOG00000011643	-	89	76.090	ENSMODG00000007343	-	99	76.090	Monodelphis_domestica
ENSCPOG00000011643	-	71	60.310	ENSMALG00000001520	rad54b	99	60.310	Monopterus_albus
ENSCPOG00000011643	-	99	78.619	MGP_CAROLIEiJ_G0025810	Rad54b	99	78.619	Mus_caroli
ENSCPOG00000011643	-	99	77.480	ENSMUSG00000078773	Rad54b	99	77.480	Mus_musculus
ENSCPOG00000011643	-	99	78.038	MGP_PahariEiJ_G0023933	Rad54b	99	78.038	Mus_pahari
ENSCPOG00000011643	-	99	78.372	MGP_SPRETEiJ_G0026758	Rad54b	99	78.372	Mus_spretus
ENSCPOG00000011643	-	90	84.672	ENSMPUG00000008878	-	99	84.672	Mustela_putorius_furo
ENSCPOG00000011643	-	99	80.220	ENSMLUG00000008953	-	99	80.220	Myotis_lucifugus
ENSCPOG00000011643	-	99	81.078	ENSNGAG00000017537	Rad54b	99	81.078	Nannospalax_galili
ENSCPOG00000011643	-	99	56.229	ENSNBRG00000013394	rad54b	99	56.229	Neolamprologus_brichardi
ENSCPOG00000011643	-	100	84.413	ENSNLEG00000003062	-	100	88.446	Nomascus_leucogenys
ENSCPOG00000011643	-	72	72.637	ENSMEUG00000012426	-	71	72.637	Notamacropus_eugenii
ENSCPOG00000011643	-	99	91.040	ENSODEG00000019564	-	100	91.040	Octodon_degus
ENSCPOG00000011643	-	90	84.406	ENSODEG00000002650	-	96	90.462	Octodon_degus
ENSCPOG00000011643	-	99	55.128	ENSONIG00000006067	rad54b	99	55.128	Oreochromis_niloticus
ENSCPOG00000011643	-	83	75.830	ENSOANG00000011348	-	100	75.830	Ornithorhynchus_anatinus
ENSCPOG00000011643	-	100	81.778	ENSOCUG00000016478	-	100	81.778	Oryctolagus_cuniculus
ENSCPOG00000011643	-	99	55.000	ENSORLG00000008918	rad54b	99	62.404	Oryzias_latipes
ENSCPOG00000011643	-	71	62.404	ENSORLG00020012171	rad54b	99	62.404	Oryzias_latipes_hni
ENSCPOG00000011643	-	99	54.565	ENSORLG00015018536	rad54b	99	54.565	Oryzias_latipes_hsok
ENSCPOG00000011643	-	85	60.719	ENSOMEG00000004345	rad54b	99	60.719	Oryzias_melastigma
ENSCPOG00000011643	-	99	82.398	ENSOGAG00000007854	-	99	82.308	Otolemur_garnettii
ENSCPOG00000011643	-	90	84.340	ENSOARG00000007691	-	99	84.340	Ovis_aries
ENSCPOG00000011643	-	99	83.150	ENSPPAG00000029572	-	99	83.150	Pan_paniscus
ENSCPOG00000011643	-	99	82.217	ENSPPRG00000007571	-	100	86.501	Panthera_pardus
ENSCPOG00000011643	-	81	86.639	ENSPTIG00000012670	-	100	86.639	Panthera_tigris_altaica
ENSCPOG00000011643	-	99	84.802	ENSPTRG00000020427	-	99	88.674	Pan_troglodytes
ENSCPOG00000011643	-	99	84.251	ENSPANG00000019566	-	99	84.251	Papio_anubis
ENSCPOG00000011643	-	99	56.943	ENSPKIG00000014974	rad54b	99	57.127	Paramormyrops_kingsleyae
ENSCPOG00000011643	-	99	67.283	ENSPSIG00000002383	-	98	72.615	Pelodiscus_sinensis
ENSCPOG00000011643	-	99	78.690	ENSPEMG00000012133	Rad54b	100	78.690	Peromyscus_maniculatus_bairdii
ENSCPOG00000011643	-	87	58.677	ENSPMAG00000002916	rad54b	99	58.677	Petromyzon_marinus
ENSCPOG00000011643	-	89	76.566	ENSPCIG00000020151	-	94	75.871	Phascolarctos_cinereus
ENSCPOG00000011643	-	100	54.478	ENSPFOG00000023411	rad54b	100	54.478	Poecilia_formosa
ENSCPOG00000011643	-	100	54.795	ENSPLAG00000010430	rad54b	100	54.795	Poecilia_latipinna
ENSCPOG00000011643	-	100	54.632	ENSPMEG00000016873	rad54b	100	54.632	Poecilia_mexicana
ENSCPOG00000011643	-	100	56.346	ENSPREG00000018443	rad54b	100	56.346	Poecilia_reticulata
ENSCPOG00000011643	-	99	84.471	ENSPPYG00000018750	-	99	84.471	Pongo_abelii
ENSCPOG00000011643	-	99	84.598	ENSPCOG00000026845	-	99	87.983	Propithecus_coquereli
ENSCPOG00000011643	-	88	86.351	ENSPVAG00000000261	-	86	86.351	Pteropus_vampyrus
ENSCPOG00000011643	-	87	59.647	ENSPNYG00000018303	rad54b	96	59.647	Pundamilia_nyererei
ENSCPOG00000011643	-	99	54.295	ENSPNAG00000000295	rad54b	99	54.295	Pygocentrus_nattereri
ENSCPOG00000011643	-	99	75.916	ENSRNOG00000039949	Rad54b	100	75.916	Rattus_norvegicus
ENSCPOG00000011643	-	99	83.260	ENSRBIG00000020419	-	99	83.260	Rhinopithecus_bieti
ENSCPOG00000011643	-	99	83.260	ENSRROG00000039897	-	99	83.260	Rhinopithecus_roxellana
ENSCPOG00000011643	-	79	38.059	YBR073W	RDH54	79	38.107	Saccharomyces_cerevisiae
ENSCPOG00000011643	-	99	82.838	ENSSBOG00000028501	-	99	82.838	Saimiri_boliviensis_boliviensis
ENSCPOG00000011643	-	99	72.198	ENSSHAG00000017038	-	99	72.198	Sarcophilus_harrisii
ENSCPOG00000011643	-	63	65.263	ENSSFOG00015008483	rad54b	88	65.263	Scleropages_formosus
ENSCPOG00000011643	-	99	53.594	ENSSMAG00000018659	rad54b	99	54.707	Scophthalmus_maximus
ENSCPOG00000011643	-	99	53.838	ENSSDUG00000001122	rad54b	98	53.659	Seriola_dumerili
ENSCPOG00000011643	-	99	53.911	ENSSLDG00000013787	rad54b	99	53.733	Seriola_lalandi_dorsalis
ENSCPOG00000011643	-	100	68.882	ENSSPUG00000016497	-	100	68.882	Sphenodon_punctatus
ENSCPOG00000011643	-	99	55.947	ENSSPAG00000012800	rad54b	99	55.837	Stegastes_partitus
ENSCPOG00000011643	-	99	81.195	ENSSSCG00000006101	-	99	85.571	Sus_scrofa
ENSCPOG00000011643	-	99	67.068	ENSTGUG00000011880	-	99	67.068	Taeniopygia_guttata
ENSCPOG00000011643	-	99	53.609	ENSTRUG00000010015	rad54b	99	53.609	Takifugu_rubripes
ENSCPOG00000011643	-	99	78.571	ENSTTRG00000006312	-	100	78.571	Tursiops_truncatus
ENSCPOG00000011643	-	99	82.656	ENSUMAG00000016401	-	100	82.656	Ursus_maritimus
ENSCPOG00000011643	-	99	80.702	ENSVPAG00000003157	-	100	80.702	Vicugna_pacos
ENSCPOG00000011643	-	99	55.184	ENSXETG00000025924	rad54b	99	59.398	Xenopus_tropicalis
ENSCPOG00000011643	-	100	55.738	ENSXMAG00000013141	rad54b	100	55.738	Xiphophorus_maculatus