EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011662 (Gene tree)
Gene ID: 100731454
Gene Symbol: GRSF1
Alias: -
Full Name: G-rich RNA sequence binding factor 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 18384 bases
Position: chrDS562902.1:2987479-3005862
Accession: 100731454
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000027936	RRM_1	PF00076.22	1.1e-20	1	1
ENSCPOP00000010488	RRM_1	PF00076.22	3.8e-20	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000041074	GRSF1-202	5294	-	ENSCPOP00000027936	361 (aa)	-	A0A286XRN0
ENSCPOT00000011774	GRSF1-201	1416	XM_013150106	ENSCPOP00000010488	471 (aa)	-	H0VJP7

Gene Model

Click here to download ENSCPOG00000011662's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011662's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011662	GRSF1	93	40.108	ENSCPOG00000003678	HNRNPF	87	40.108
ENSCPOG00000011662	GRSF1	72	45.455	ENSCPOG00000034133	-	71	45.455
ENSCPOG00000011662	GRSF1	93	56.962	ENSCPOG00000012405	HNRNPH2	61	56.962
ENSCPOG00000011662	GRSF1	93	39.296	ENSCPOG00000012889	-	83	39.181
ENSCPOG00000011662	GRSF1	93	58.228	ENSCPOG00000001485	-	61	57.500
ENSCPOG00000011662	GRSF1	93	36.236	ENSCPOG00000039226	-	84	36.236

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011662	GRSF1	100	88.366	ENSG00000132463	GRSF1	100	89.308	Homo_sapiens
ENSCPOG00000011662	GRSF1	100	89.197	ENSAMEG00000005896	GRSF1	100	88.950	Ailuropoda_melanoleuca
ENSCPOG00000011662	GRSF1	99	68.144	ENSACAG00000012921	GRSF1	91	56.939	Anolis_carolinensis
ENSCPOG00000011662	GRSF1	100	90.582	ENSANAG00000022114	GRSF1	97	90.584	Aotus_nancymaae
ENSCPOG00000011662	GRSF1	100	88.643	ENSBTAG00000008577	GRSF1	99	88.643	Bos_taurus
ENSCPOG00000011662	GRSF1	100	90.582	ENSCJAG00000014477	GRSF1	99	90.584	Callithrix_jacchus
ENSCPOG00000011662	GRSF1	91	89.680	ENSCAFG00000002922	GRSF1	100	89.680	Canis_familiaris
ENSCPOG00000011662	GRSF1	100	89.197	ENSCAFG00020027060	GRSF1	99	89.333	Canis_lupus_dingo
ENSCPOG00000011662	GRSF1	100	88.643	ENSCHIG00000021580	GRSF1	100	82.917	Capra_hircus
ENSCPOG00000011662	GRSF1	100	90.028	ENSTSYG00000008487	-	100	90.252	Carlito_syrichta
ENSCPOG00000011662	GRSF1	99	73.056	ENSTSYG00000028860	-	99	73.056	Carlito_syrichta
ENSCPOG00000011662	GRSF1	91	100.000	ENSCAPG00000000156	GRSF1	100	100.000	Cavia_aperea
ENSCPOG00000011662	GRSF1	100	89.474	ENSCCAG00000028735	-	100	82.881	Cebus_capucinus
ENSCPOG00000011662	GRSF1	91	78.764	ENSCCAG00000024189	-	87	75.182	Cebus_capucinus
ENSCPOG00000011662	GRSF1	100	89.474	ENSCATG00000035808	GRSF1	99	90.000	Cercocebus_atys
ENSCPOG00000011662	GRSF1	100	89.751	ENSCLAG00000003057	GRSF1	100	89.751	Chinchilla_lanigera
ENSCPOG00000011662	GRSF1	100	88.920	ENSCSAG00000004856	GRSF1	100	82.881	Chlorocebus_sabaeus
ENSCPOG00000011662	GRSF1	100	66.575	ENSCPBG00000019502	GRSF1	86	61.653	Chrysemys_picta_bellii
ENSCPOG00000011662	GRSF1	91	90.252	ENSCANG00000037992	GRSF1	100	90.252	Colobus_angolensis_palliatus
ENSCPOG00000011662	GRSF1	100	88.643	ENSCGRG00001019953	Grsf1	99	88.643	Cricetulus_griseus_chok1gshd
ENSCPOG00000011662	GRSF1	100	88.643	ENSCGRG00000005357	Grsf1	100	88.643	Cricetulus_griseus_crigri
ENSCPOG00000011662	GRSF1	100	89.751	ENSDORG00000015145	Grsf1	100	94.891	Dipodomys_ordii
ENSCPOG00000011662	GRSF1	96	88.986	ENSETEG00000013786	GRSF1	100	88.986	Echinops_telfairi
ENSCPOG00000011662	GRSF1	100	88.089	ENSEASG00005016685	GRSF1	94	82.292	Equus_asinus_asinus
ENSCPOG00000011662	GRSF1	100	87.812	ENSECAG00000024208	GRSF1	94	82.255	Equus_caballus
ENSCPOG00000011662	GRSF1	99	42.222	ENSELUG00000011613	-	91	42.033	Esox_lucius
ENSCPOG00000011662	GRSF1	100	88.643	ENSFCAG00000007270	GRSF1	100	83.090	Felis_catus
ENSCPOG00000011662	GRSF1	93	53.043	ENSFALG00000008394	GRSF1	98	54.252	Ficedula_albicollis
ENSCPOG00000011662	GRSF1	76	88.321	ENSFDAG00000008167	-	100	88.321	Fukomys_damarensis
ENSCPOG00000011662	GRSF1	99	47.684	ENSGALG00000031160	GRSF1	78	47.804	Gallus_gallus
ENSCPOG00000011662	GRSF1	100	67.308	ENSGAGG00000006013	GRSF1	99	61.814	Gopherus_agassizii
ENSCPOG00000011662	GRSF1	91	88.994	ENSGGOG00000014852	-	100	88.994	Gorilla_gorilla
ENSCPOG00000011662	GRSF1	100	86.704	ENSHGLG00000000661	GRSF1	100	86.704	Heterocephalus_glaber_female
ENSCPOG00000011662	GRSF1	100	86.704	ENSHGLG00100005974	GRSF1	100	91.241	Heterocephalus_glaber_male
ENSCPOG00000011662	GRSF1	100	89.751	ENSSTOG00000011569	GRSF1	99	89.751	Ictidomys_tridecemlineatus
ENSCPOG00000011662	GRSF1	98	85.797	ENSJJAG00000005325	Grsf1	100	91.971	Jaculus_jaculus
ENSCPOG00000011662	GRSF1	97	53.009	ENSLACG00000009507	GRSF1	96	53.009	Latimeria_chalumnae
ENSCPOG00000011662	GRSF1	97	45.869	ENSLOCG00000011589	GRSF1	77	45.869	Lepisosteus_oculatus
ENSCPOG00000011662	GRSF1	100	87.845	ENSLAFG00000017032	-	100	81.405	Loxodonta_africana
ENSCPOG00000011662	GRSF1	100	89.197	ENSMFAG00000037346	GRSF1	99	89.677	Macaca_fascicularis
ENSCPOG00000011662	GRSF1	100	89.197	ENSMMUG00000000380	GRSF1	99	89.935	Macaca_mulatta
ENSCPOG00000011662	GRSF1	100	82.320	ENSMNEG00000023162	GRSF1	99	85.366	Macaca_nemestrina
ENSCPOG00000011662	GRSF1	100	89.474	ENSMLEG00000007180	GRSF1	99	90.000	Mandrillus_leucophaeus
ENSCPOG00000011662	GRSF1	93	50.445	ENSMGAG00000009940	GRSF1	98	50.445	Meleagris_gallopavo
ENSCPOG00000011662	GRSF1	100	88.920	ENSMICG00000005385	GRSF1	99	88.920	Microcebus_murinus
ENSCPOG00000011662	GRSF1	71	94.891	ENSMOCG00000012769	-	100	94.891	Microtus_ochrogaster
ENSCPOG00000011662	GRSF1	100	79.558	ENSMODG00000019088	GRSF1	90	73.292	Monodelphis_domestica
ENSCPOG00000011662	GRSF1	100	88.366	MGP_CAROLIEiJ_G0027377	Grsf1	100	93.431	Mus_caroli
ENSCPOG00000011662	GRSF1	100	88.366	ENSMUSG00000044221	Grsf1	100	93.431	Mus_musculus
ENSCPOG00000011662	GRSF1	100	86.981	MGP_PahariEiJ_G0017155	Grsf1	100	92.701	Mus_pahari
ENSCPOG00000011662	GRSF1	100	88.366	MGP_SPRETEiJ_G0028374	Grsf1	99	88.366	Mus_spretus
ENSCPOG00000011662	GRSF1	100	88.366	ENSMPUG00000009499	GRSF1	97	87.705	Mustela_putorius_furo
ENSCPOG00000011662	GRSF1	100	86.813	ENSMLUG00000028158	GRSF1	100	86.575	Myotis_lucifugus
ENSCPOG00000011662	GRSF1	71	92.701	ENSNGAG00000022132	-	100	92.701	Nannospalax_galili
ENSCPOG00000011662	GRSF1	91	88.350	ENSNLEG00000007721	-	99	88.065	Nomascus_leucogenys
ENSCPOG00000011662	GRSF1	99	68.715	ENSMEUG00000015942	GRSF1	99	68.715	Notamacropus_eugenii
ENSCPOG00000011662	GRSF1	98	86.333	ENSOPRG00000010148	-	78	86.333	Ochotona_princeps
ENSCPOG00000011662	GRSF1	100	78.670	ENSODEG00000004897	-	100	78.670	Octodon_degus
ENSCPOG00000011662	GRSF1	94	78.824	ENSODEG00000010775	-	99	78.824	Octodon_degus
ENSCPOG00000011662	GRSF1	100	90.028	ENSODEG00000001826	-	100	86.017	Octodon_degus
ENSCPOG00000011662	GRSF1	89	60.163	ENSOANG00000013696	-	100	60.163	Ornithorhynchus_anatinus
ENSCPOG00000011662	GRSF1	100	89.474	ENSOCUG00000010029	GRSF1	100	72.336	Oryctolagus_cuniculus
ENSCPOG00000011662	GRSF1	100	85.440	ENSOGAG00000000141	-	100	85.205	Otolemur_garnettii
ENSCPOG00000011662	GRSF1	100	77.839	ENSOGAG00000026370	-	99	68.884	Otolemur_garnettii
ENSCPOG00000011662	GRSF1	100	88.462	ENSOARG00000011898	GRSF1	100	88.219	Ovis_aries
ENSCPOG00000011662	GRSF1	91	89.308	ENSPPAG00000042456	-	100	89.308	Pan_paniscus
ENSCPOG00000011662	GRSF1	100	88.643	ENSPPRG00000022913	GRSF1	100	83.090	Panthera_pardus
ENSCPOG00000011662	GRSF1	100	88.366	ENSPTIG00000008060	GRSF1	99	88.366	Panthera_tigris_altaica
ENSCPOG00000011662	GRSF1	100	87.812	ENSPTRG00000016136	GRSF1	99	88.710	Pan_troglodytes
ENSCPOG00000011662	GRSF1	100	88.643	ENSPANG00000018597	GRSF1	99	89.032	Papio_anubis
ENSCPOG00000011662	GRSF1	98	72.500	ENSPSIG00000014267	-	97	72.139	Pelodiscus_sinensis
ENSCPOG00000011662	GRSF1	100	88.920	ENSPEMG00000012814	Grsf1	99	88.920	Peromyscus_maniculatus_bairdii
ENSCPOG00000011662	GRSF1	100	80.609	ENSPCIG00000000627	GRSF1	100	74.530	Phascolarctos_cinereus
ENSCPOG00000011662	GRSF1	100	69.806	ENSPPYG00000014812	GRSF1	100	69.439	Pongo_abelii
ENSCPOG00000011662	GRSF1	100	89.197	ENSPCAG00000013949	GRSF1	100	82.403	Procavia_capensis
ENSCPOG00000011662	GRSF1	100	88.643	ENSPVAG00000004338	GRSF1	100	82.415	Pteropus_vampyrus
ENSCPOG00000011662	GRSF1	100	88.089	ENSRNOG00000003392	Grsf1	95	88.089	Rattus_norvegicus
ENSCPOG00000011662	GRSF1	100	89.197	ENSRBIG00000036494	GRSF1	99	90.000	Rhinopithecus_bieti
ENSCPOG00000011662	GRSF1	100	88.920	ENSRROG00000035735	GRSF1	99	89.677	Rhinopithecus_roxellana
ENSCPOG00000011662	GRSF1	91	92.208	ENSSBOG00000032141	GRSF1	100	92.208	Saimiri_boliviensis_boliviensis
ENSCPOG00000011662	GRSF1	99	82.123	ENSSHAG00000018365	GRSF1	97	79.679	Sarcophilus_harrisii
ENSCPOG00000011662	GRSF1	91	88.312	ENSSARG00000011681	GRSF1	100	88.312	Sorex_araneus
ENSCPOG00000011662	GRSF1	98	60.000	ENSSPUG00000007576	GRSF1	99	56.579	Sphenodon_punctatus
ENSCPOG00000011662	GRSF1	100	88.366	ENSSSCG00000008940	GRSF1	100	81.837	Sus_scrofa
ENSCPOG00000011662	GRSF1	96	55.143	ENSTGUG00000001644	GRSF1	100	55.143	Taeniopygia_guttata
ENSCPOG00000011662	GRSF1	91	89.935	ENSTBEG00000010173	GRSF1	100	89.935	Tupaia_belangeri
ENSCPOG00000011662	GRSF1	100	83.657	ENSTTRG00000008405	GRSF1	98	83.938	Tursiops_truncatus
ENSCPOG00000011662	GRSF1	98	91.120	ENSUAMG00000008901	GRSF1	93	91.120	Ursus_americanus
ENSCPOG00000011662	GRSF1	100	89.474	ENSUMAG00000003757	GRSF1	87	89.474	Ursus_maritimus
ENSCPOG00000011662	GRSF1	100	76.454	ENSVPAG00000011889	GRSF1	100	76.454	Vicugna_pacos
ENSCPOG00000011662	GRSF1	95	89.826	ENSVVUG00000004150	GRSF1	100	89.826	Vulpes_vulpes
ENSCPOG00000011662	GRSF1	99	50.000	ENSXETG00000013850	grsf1	100	50.565	Xenopus_tropicalis