EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011727 (Gene tree)
Gene ID: 100716876
Gene Symbol: GFI1
Alias: GFI-1|GFI1A|ZNF163
Full Name: growth factor independent 1 transcriptional repressor
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 8821 bases
Position: chrDS562857.1:18360000-18368820
Accession: 100716876
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010546	zf-C2H2	PF00096.26	5.7e-28	1	6
ENSCPOP00000010546	zf-C2H2	PF00096.26	5.7e-28	2	6
ENSCPOP00000010546	zf-C2H2	PF00096.26	5.7e-28	3	6
ENSCPOP00000010546	zf-C2H2	PF00096.26	5.7e-28	4	6
ENSCPOP00000010546	zf-C2H2	PF00096.26	5.7e-28	5	6
ENSCPOP00000010546	zf-C2H2	PF00096.26	5.7e-28	6	6
ENSCPOP00000010546	zf-met	PF12874.7	1.2e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011841	GFI1-201	2921	XM_005007815	ENSCPOP00000010546	420 (aa)	XP_005007872	H0VJV1

Gene Model

Click here to download ENSCPOG00000011727's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011727's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011727	GFI1	53	43.182	ENSCPOG00000000634	ZFP1	68	43.182
ENSCPOG00000011727	GFI1	57	40.000	ENSCPOG00000000162	ZNF423	66	40.000
ENSCPOG00000011727	GFI1	66	43.787	ENSCPOG00000034791	-	72	43.787

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011727	GFI1	100	91.706	ENSG00000162676	GFI1	100	92.417	Homo_sapiens
ENSCPOG00000011727	GFI1	100	63.357	ENSAPOG00000015189	gfi1ab	100	61.358	Acanthochromis_polyacanthus
ENSCPOG00000011727	GFI1	100	63.443	ENSACIG00000016354	gfi1ab	100	62.500	Amphilophus_citrinellus
ENSCPOG00000011727	GFI1	100	54.333	ENSAOCG00000008339	gfi1ab	100	52.000	Amphiprion_ocellaris
ENSCPOG00000011727	GFI1	100	62.937	ENSAPEG00000023870	gfi1ab	100	62.061	Amphiprion_percula
ENSCPOG00000011727	GFI1	100	60.417	ENSATEG00000009167	gfi1ab	89	60.000	Anabas_testudineus
ENSCPOG00000011727	GFI1	87	75.676	ENSAPLG00000015700	GFI1	99	74.595	Anas_platyrhynchos
ENSCPOG00000011727	GFI1	100	71.230	ENSACAG00000004498	GFI1	100	70.534	Anolis_carolinensis
ENSCPOG00000011727	GFI1	100	91.943	ENSANAG00000019656	GFI1	100	91.469	Aotus_nancymaae
ENSCPOG00000011727	GFI1	100	63.294	ENSACLG00000026458	gfi1ab	93	62.118	Astatotilapia_calliptera
ENSCPOG00000011727	GFI1	75	57.585	ENSAMXG00000006669	GFI1	59	87.027	Astyanax_mexicanus
ENSCPOG00000011727	GFI1	100	60.471	ENSAMXG00000039600	gfi1ab	100	60.000	Astyanax_mexicanus
ENSCPOG00000011727	GFI1	67	45.695	ENSAMXG00000015228	-	56	62.147	Astyanax_mexicanus
ENSCPOG00000011727	GFI1	100	89.549	ENSBTAG00000016723	GFI1	100	89.786	Bos_taurus
ENSCPOG00000011727	GFI1	100	89.810	ENSCJAG00000017609	GFI1	100	90.521	Callithrix_jacchus
ENSCPOG00000011727	GFI1	100	90.047	ENSCAFG00000020155	GFI1	100	90.047	Canis_familiaris
ENSCPOG00000011727	GFI1	100	90.047	ENSCAFG00020013371	GFI1	88	89.810	Canis_lupus_dingo
ENSCPOG00000011727	GFI1	100	89.074	ENSCHIG00000016135	GFI1	100	89.549	Capra_hircus
ENSCPOG00000011727	GFI1	100	90.521	ENSCCAG00000036072	GFI1	100	91.469	Cebus_capucinus
ENSCPOG00000011727	GFI1	100	91.232	ENSCATG00000037873	GFI1	100	91.943	Cercocebus_atys
ENSCPOG00000011727	GFI1	100	88.571	ENSCLAG00000005915	GFI1	100	88.453	Chinchilla_lanigera
ENSCPOG00000011727	GFI1	86	90.934	ENSCSAG00000001469	GFI1	100	90.659	Chlorocebus_sabaeus
ENSCPOG00000011727	GFI1	100	90.995	ENSCANG00000034077	GFI1	100	91.706	Colobus_angolensis_palliatus
ENSCPOG00000011727	GFI1	100	86.256	ENSCGRG00001015432	Gfi1	100	87.915	Cricetulus_griseus_chok1gshd
ENSCPOG00000011727	GFI1	100	57.576	ENSCSEG00000017729	GFI1	100	55.809	Cynoglossus_semilaevis
ENSCPOG00000011727	GFI1	100	58.140	ENSCVAG00000004930	GFI1	100	60.187	Cyprinodon_variegatus
ENSCPOG00000011727	GFI1	100	62.383	ENSCVAG00000011828	gfi1ab	100	60.698	Cyprinodon_variegatus
ENSCPOG00000011727	GFI1	100	63.850	ENSDARG00000044457	gfi1ab	100	63.850	Danio_rerio
ENSCPOG00000011727	GFI1	100	89.598	ENSDNOG00000000782	GFI1	97	91.489	Dasypus_novemcinctus
ENSCPOG00000011727	GFI1	100	90.284	ENSEASG00005015509	GFI1	86	89.100	Equus_asinus_asinus
ENSCPOG00000011727	GFI1	92	83.763	ENSECAG00000006647	GFI1	92	85.052	Equus_caballus
ENSCPOG00000011727	GFI1	100	84.048	ENSEEUG00000000198	GFI1	100	84.286	Erinaceus_europaeus
ENSCPOG00000011727	GFI1	100	63.889	ENSELUG00000003015	gfi1ab	99	64.037	Esox_lucius
ENSCPOG00000011727	GFI1	100	59.906	ENSELUG00000019033	GFI1	100	59.906	Esox_lucius
ENSCPOG00000011727	GFI1	100	90.521	ENSFCAG00000005914	GFI1	100	90.284	Felis_catus
ENSCPOG00000011727	GFI1	100	62.617	ENSFHEG00000010997	gfi1ab	100	61.060	Fundulus_heteroclitus
ENSCPOG00000011727	GFI1	100	58.430	ENSFHEG00000000341	GFI1	100	58.891	Fundulus_heteroclitus
ENSCPOG00000011727	GFI1	100	62.150	ENSGMOG00000007737	gfi1ab	100	61.449	Gadus_morhua
ENSCPOG00000011727	GFI1	100	73.893	ENSGALG00000043650	GFI1	100	72.960	Gallus_gallus
ENSCPOG00000011727	GFI1	100	57.569	ENSGAFG00000018063	GFI1	100	60.563	Gambusia_affinis
ENSCPOG00000011727	GFI1	100	61.982	ENSGAFG00000016637	gfi1ab	100	61.290	Gambusia_affinis
ENSCPOG00000011727	GFI1	100	62.911	ENSGACG00000004257	gfi1ab	97	62.617	Gasterosteus_aculeatus
ENSCPOG00000011727	GFI1	100	91.706	ENSGGOG00000005320	GFI1	100	92.417	Gorilla_gorilla
ENSCPOG00000011727	GFI1	100	64.066	ENSHBUG00000011969	gfi1ab	100	62.175	Haplochromis_burtoni
ENSCPOG00000011727	GFI1	100	94.762	ENSHGLG00000008020	GFI1	100	94.762	Heterocephalus_glaber_female
ENSCPOG00000011727	GFI1	100	94.762	ENSHGLG00100000610	GFI1	100	94.762	Heterocephalus_glaber_male
ENSCPOG00000011727	GFI1	100	53.795	ENSHCOG00000008590	gfi1ab	100	50.885	Hippocampus_comes
ENSCPOG00000011727	GFI1	100	57.809	ENSHCOG00000019555	GFI1	84	88.172	Hippocampus_comes
ENSCPOG00000011727	GFI1	100	59.390	ENSIPUG00000013414	GFI1	100	58.237	Ictalurus_punctatus
ENSCPOG00000011727	GFI1	100	62.322	ENSIPUG00000010071	gfi1ab	87	61.682	Ictalurus_punctatus
ENSCPOG00000011727	GFI1	100	90.047	ENSSTOG00000014583	GFI1	100	90.521	Ictidomys_tridecemlineatus
ENSCPOG00000011727	GFI1	100	62.118	ENSKMAG00000003810	gfi1ab	100	62.118	Kryptolebias_marmoratus
ENSCPOG00000011727	GFI1	100	61.697	ENSLBEG00000027776	gfi1ab	100	61.468	Labrus_bergylta
ENSCPOG00000011727	GFI1	99	76.667	ENSLACG00000017590	-	99	76.667	Latimeria_chalumnae
ENSCPOG00000011727	GFI1	100	69.484	ENSLACG00000013362	GFI1	98	69.014	Latimeria_chalumnae
ENSCPOG00000011727	GFI1	100	66.357	ENSLOCG00000004711	gfi1ab	100	66.125	Lepisosteus_oculatus
ENSCPOG00000011727	GFI1	100	84.561	ENSLAFG00000018346	GFI1	100	84.323	Loxodonta_africana
ENSCPOG00000011727	GFI1	100	91.232	ENSMFAG00000045801	GFI1	100	91.943	Macaca_fascicularis
ENSCPOG00000011727	GFI1	100	91.232	ENSMNEG00000036338	GFI1	100	91.943	Macaca_nemestrina
ENSCPOG00000011727	GFI1	100	91.232	ENSMLEG00000036181	GFI1	100	91.943	Mandrillus_leucophaeus
ENSCPOG00000011727	GFI1	100	63.170	ENSMAMG00000008125	gfi1ab	100	62.704	Mastacembelus_armatus
ENSCPOG00000011727	GFI1	100	63.529	ENSMZEG00005009895	gfi1ab	100	62.353	Maylandia_zebra
ENSCPOG00000011727	GFI1	87	76.423	ENSMGAG00000008187	GFI1	99	75.339	Meleagris_gallopavo
ENSCPOG00000011727	GFI1	100	91.943	ENSMICG00000047208	GFI1	100	91.943	Microcebus_murinus
ENSCPOG00000011727	GFI1	100	59.070	ENSMMOG00000005556	gfi1ab	100	59.070	Mola_mola
ENSCPOG00000011727	GFI1	100	78.851	ENSMODG00000011802	GFI1	100	79.080	Monodelphis_domestica
ENSCPOG00000011727	GFI1	100	62.500	ENSMALG00000014672	gfi1ab	100	62.264	Monopterus_albus
ENSCPOG00000011727	GFI1	100	88.180	MGP_CAROLIEiJ_G0027508	Gfi1	100	99.259	Mus_caroli
ENSCPOG00000011727	GFI1	100	89.125	ENSMUSG00000029275	Gfi1	100	86.998	Mus_musculus
ENSCPOG00000011727	GFI1	100	87.470	MGP_PahariEiJ_G0017280	Gfi1	100	99.259	Mus_pahari
ENSCPOG00000011727	GFI1	100	87.943	MGP_SPRETEiJ_G0028507	Gfi1	100	88.652	Mus_spretus
ENSCPOG00000011727	GFI1	100	81.948	ENSMPUG00000004178	GFI1	97	81.948	Mustela_putorius_furo
ENSCPOG00000011727	GFI1	100	88.889	ENSMLUG00000015191	GFI1	97	87.470	Myotis_lucifugus
ENSCPOG00000011727	GFI1	100	61.927	ENSNBRG00000015774	gfi1ab	100	61.009	Neolamprologus_brichardi
ENSCPOG00000011727	GFI1	93	89.770	ENSNLEG00000010470	GFI1	97	90.537	Nomascus_leucogenys
ENSCPOG00000011727	GFI1	100	92.891	ENSOPRG00000001473	GFI1	100	93.128	Ochotona_princeps
ENSCPOG00000011727	GFI1	100	63.380	ENSONIG00000019246	gfi1ab	100	62.118	Oreochromis_niloticus
ENSCPOG00000011727	GFI1	86	88.525	ENSOCUG00000023553	GFI1	93	89.617	Oryctolagus_cuniculus
ENSCPOG00000011727	GFI1	100	59.722	ENSORLG00000005060	GFI1	100	59.259	Oryzias_latipes
ENSCPOG00000011727	GFI1	100	62.383	ENSORLG00000013806	gfi1ab	100	61.682	Oryzias_latipes
ENSCPOG00000011727	GFI1	100	53.774	ENSORLG00020002817	GFI1	90	61.656	Oryzias_latipes_hni
ENSCPOG00000011727	GFI1	100	63.121	ENSORLG00020001602	gfi1ab	100	62.648	Oryzias_latipes_hni
ENSCPOG00000011727	GFI1	100	59.719	ENSORLG00015006070	GFI1	100	59.016	Oryzias_latipes_hsok
ENSCPOG00000011727	GFI1	100	58.741	ENSOMEG00000016722	GFI1	100	58.411	Oryzias_melastigma
ENSCPOG00000011727	GFI1	100	77.197	ENSOGAG00000027913	GFI1	100	66.905	Otolemur_garnettii
ENSCPOG00000011727	GFI1	71	97.143	ENSOARG00000016329	GFI1	94	97.143	Ovis_aries
ENSCPOG00000011727	GFI1	100	78.622	ENSPPAG00000042186	GFI1	100	67.062	Pan_paniscus
ENSCPOG00000011727	GFI1	100	90.521	ENSPPRG00000007521	GFI1	100	90.284	Panthera_pardus
ENSCPOG00000011727	GFI1	100	91.706	ENSPTRG00000043053	GFI1	100	92.417	Pan_troglodytes
ENSCPOG00000011727	GFI1	100	91.232	ENSPANG00000016433	GFI1	100	91.943	Papio_anubis
ENSCPOG00000011727	GFI1	100	65.509	ENSPKIG00000004263	GFI1	100	63.470	Paramormyrops_kingsleyae
ENSCPOG00000011727	GFI1	90	73.753	ENSPSIG00000008734	GFI1	99	73.753	Pelodiscus_sinensis
ENSCPOG00000011727	GFI1	100	60.000	ENSPMGG00000012546	gfi1ab	100	60.000	Periophthalmus_magnuspinnatus
ENSCPOG00000011727	GFI1	100	80.607	ENSPCIG00000013728	GFI1	100	80.607	Phascolarctos_cinereus
ENSCPOG00000011727	GFI1	100	61.395	ENSPFOG00000023214	gfi1ab	100	61.939	Poecilia_formosa
ENSCPOG00000011727	GFI1	100	61.395	ENSPLAG00000010879	gfi1ab	100	61.939	Poecilia_latipinna
ENSCPOG00000011727	GFI1	100	59.165	ENSPLAG00000005376	GFI1	91	61.502	Poecilia_latipinna
ENSCPOG00000011727	GFI1	100	59.397	ENSPMEG00000019299	GFI1	100	61.268	Poecilia_mexicana
ENSCPOG00000011727	GFI1	100	62.884	ENSPMEG00000013694	gfi1ab	100	62.411	Poecilia_mexicana
ENSCPOG00000011727	GFI1	100	53.864	ENSPREG00000007997	GFI1	100	54.091	Poecilia_reticulata
ENSCPOG00000011727	GFI1	100	62.150	ENSPREG00000014097	gfi1ab	100	61.449	Poecilia_reticulata
ENSCPOG00000011727	GFI1	100	77.647	ENSPCAG00000011020	GFI1	100	78.118	Procavia_capensis
ENSCPOG00000011727	GFI1	100	91.943	ENSPCOG00000020540	GFI1	100	91.943	Propithecus_coquereli
ENSCPOG00000011727	GFI1	100	88.599	ENSPVAG00000006928	GFI1	100	87.648	Pteropus_vampyrus
ENSCPOG00000011727	GFI1	100	63.294	ENSPNYG00000021183	gfi1ab	100	62.118	Pundamilia_nyererei
ENSCPOG00000011727	GFI1	100	61.466	ENSPNAG00000027258	gfi1ab	100	60.284	Pygocentrus_nattereri
ENSCPOG00000011727	GFI1	100	62.147	ENSPNAG00000014299	-	58	62.147	Pygocentrus_nattereri
ENSCPOG00000011727	GFI1	100	55.189	ENSPNAG00000028014	GFI1	100	53.846	Pygocentrus_nattereri
ENSCPOG00000011727	GFI1	100	88.652	ENSRNOG00000002042	Gfi1	100	88.652	Rattus_norvegicus
ENSCPOG00000011727	GFI1	100	91.232	ENSRBIG00000036467	GFI1	100	91.943	Rhinopithecus_bieti
ENSCPOG00000011727	GFI1	100	91.232	ENSRROG00000031687	GFI1	100	91.943	Rhinopithecus_roxellana
ENSCPOG00000011727	GFI1	100	89.810	ENSSBOG00000031300	GFI1	100	90.758	Saimiri_boliviensis_boliviensis
ENSCPOG00000011727	GFI1	100	66.821	ENSSFOG00015020295	gfi1	100	66.589	Scleropages_formosus
ENSCPOG00000011727	GFI1	100	61.894	ENSSMAG00000002782	gfi1ab	100	61.717	Scophthalmus_maximus
ENSCPOG00000011727	GFI1	100	61.995	ENSSDUG00000022410	gfi1ab	100	61.137	Seriola_dumerili
ENSCPOG00000011727	GFI1	100	61.611	ENSSLDG00000020163	gfi1ab	100	61.374	Seriola_lalandi_dorsalis
ENSCPOG00000011727	GFI1	81	80.645	ENSSPAG00000009140	gfi1ab	99	80.645	Stegastes_partitus
ENSCPOG00000011727	GFI1	100	91.429	ENSSSCG00000006902	GFI1	100	90.238	Sus_scrofa
ENSCPOG00000011727	GFI1	87	75.749	ENSTGUG00000006060	GFI1	99	74.659	Taeniopygia_guttata
ENSCPOG00000011727	GFI1	100	60.142	ENSTRUG00000000415	gfi1ab	100	60.142	Takifugu_rubripes
ENSCPOG00000011727	GFI1	100	59.813	ENSTNIG00000000651	gfi1ab	52	84.541	Tetraodon_nigroviridis
ENSCPOG00000011727	GFI1	100	89.311	ENSTTRG00000000082	GFI1	100	89.074	Tursiops_truncatus
ENSCPOG00000011727	GFI1	100	86.493	ENSUAMG00000021124	GFI1	91	86.493	Ursus_americanus
ENSCPOG00000011727	GFI1	100	68.720	ENSXETG00000023006	gfi1	98	66.903	Xenopus_tropicalis
ENSCPOG00000011727	GFI1	100	51.872	ENSXMAG00000009274	GFI1	70	54.865	Xiphophorus_maculatus
ENSCPOG00000011727	GFI1	100	61.916	ENSXMAG00000010523	gfi1ab	100	61.215	Xiphophorus_maculatus