EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000011754 (Gene tree)
Gene ID: 100713363
Gene Symbol: TRMT1
Alias: FLJ20244|TRM1
Full Name: tRNA methyltransferase 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 11635 bases
Position: chrDS562897.1:13192759-13204393
Accession: 100713363
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010570	zf-CCCH	PF00642.24	0.00011	1	1
ENSCPOP00000010570	TRM	PF02005.16	2.1e-147	1	1
ENSCPOP00000010570	Met_10	PF02475.16	4.4e-07	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000011869	TRMT1-201	2311	XM_003468351	ENSCPOP00000010570	660 (aa)	XP_003468399	H0VJX2

Gene Model

Click here to download ENSCPOG00000011754's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011754's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011754	TRMT1	97	83.307	ENSG00000104907	TRMT1	100	89.529	Homo_sapiens
ENSCPOG00000011754	TRMT1	99	82.648	ENSAMEG00000012598	TRMT1	98	82.648	Ailuropoda_melanoleuca
ENSCPOG00000011754	TRMT1	88	58.305	ENSACIG00000018680	trmt1	90	58.305	Amphilophus_citrinellus
ENSCPOG00000011754	TRMT1	90	64.441	ENSAOCG00000006781	trmt1	88	64.441	Amphiprion_ocellaris
ENSCPOG00000011754	TRMT1	90	64.500	ENSAPEG00000007712	trmt1	88	64.500	Amphiprion_percula
ENSCPOG00000011754	TRMT1	87	66.957	ENSATEG00000001872	trmt1	84	66.957	Anabas_testudineus
ENSCPOG00000011754	TRMT1	88	66.954	ENSACAG00000003825	TRMT1	93	66.954	Anolis_carolinensis
ENSCPOG00000011754	TRMT1	99	78.571	ENSANAG00000023016	TRMT1	99	80.868	Aotus_nancymaae
ENSCPOG00000011754	TRMT1	87	63.652	ENSACLG00000010073	trmt1	92	63.652	Astatotilapia_calliptera
ENSCPOG00000011754	TRMT1	88	65.306	ENSAMXG00000012026	trmt1	87	65.306	Astyanax_mexicanus
ENSCPOG00000011754	TRMT1	98	82.435	ENSBTAG00000019325	TRMT1	92	82.435	Bos_taurus
ENSCPOG00000011754	TRMT1	80	40.706	WBGene00006613	trm-1	96	40.706	Caenorhabditis_elegans
ENSCPOG00000011754	TRMT1	98	78.254	ENSCJAG00000004566	TRMT1	100	78.254	Callithrix_jacchus
ENSCPOG00000011754	TRMT1	99	81.957	ENSCAFG00000017070	TRMT1	98	83.467	Canis_familiaris
ENSCPOG00000011754	TRMT1	98	80.982	ENSCAFG00020005397	TRMT1	99	78.440	Canis_lupus_dingo
ENSCPOG00000011754	TRMT1	99	81.763	ENSCHIG00000013569	TRMT1	99	81.763	Capra_hircus
ENSCPOG00000011754	TRMT1	97	78.261	ENSTSYG00000003207	TRMT1	99	77.966	Carlito_syrichta
ENSCPOG00000011754	TRMT1	86	93.310	ENSCAPG00000003355	TRMT1	100	93.310	Cavia_aperea
ENSCPOG00000011754	TRMT1	94	80.193	ENSCCAG00000022263	TRMT1	99	80.193	Cebus_capucinus
ENSCPOG00000011754	TRMT1	99	82.695	ENSCATG00000039850	TRMT1	99	82.695	Cercocebus_atys
ENSCPOG00000011754	TRMT1	85	69.043	ENSCATG00000038220	-	98	69.043	Cercocebus_atys
ENSCPOG00000011754	TRMT1	98	88.426	ENSCLAG00000015295	TRMT1	96	88.426	Chinchilla_lanigera
ENSCPOG00000011754	TRMT1	80	85.094	ENSCSAG00000006500	TRMT1	100	85.094	Chlorocebus_sabaeus
ENSCPOG00000011754	TRMT1	89	67.973	ENSCPBG00000023866	TRMT1	85	69.792	Chrysemys_picta_bellii
ENSCPOG00000011754	TRMT1	84	45.043	ENSCING00000002884	-	99	45.043	Ciona_intestinalis
ENSCPOG00000011754	TRMT1	83	45.946	ENSCSAVG00000010927	-	99	46.729	Ciona_savignyi
ENSCPOG00000011754	TRMT1	95	63.955	ENSCANG00000031650	-	96	63.766	Colobus_angolensis_palliatus
ENSCPOG00000011754	TRMT1	97	67.030	ENSCANG00000040631	TRMT1	98	67.030	Colobus_angolensis_palliatus
ENSCPOG00000011754	TRMT1	98	80.556	ENSCGRG00001022594	Trmt1	98	80.556	Cricetulus_griseus_chok1gshd
ENSCPOG00000011754	TRMT1	98	80.556	ENSCGRG00000017732	Trmt1	98	80.556	Cricetulus_griseus_crigri
ENSCPOG00000011754	TRMT1	87	64.685	ENSCSEG00000001643	trmt1	84	66.342	Cynoglossus_semilaevis
ENSCPOG00000011754	TRMT1	88	65.870	ENSCVAG00000011886	trmt1	88	65.870	Cyprinodon_variegatus
ENSCPOG00000011754	TRMT1	87	63.311	ENSDARG00000010978	trmt1	85	63.793	Danio_rerio
ENSCPOG00000011754	TRMT1	83	57.505	ENSDNOG00000048240	-	94	57.505	Dasypus_novemcinctus
ENSCPOG00000011754	TRMT1	97	78.947	ENSDORG00000014298	Trmt1	98	78.947	Dipodomys_ordii
ENSCPOG00000011754	TRMT1	78	48.555	FBgn0032430	CG6388	87	48.555	Drosophila_melanogaster
ENSCPOG00000011754	TRMT1	54	78.966	ENSETEG00000015483	-	54	78.966	Echinops_telfairi
ENSCPOG00000011754	TRMT1	78	52.998	ENSEBUG00000003449	trmt1	76	53.053	Eptatretus_burgeri
ENSCPOG00000011754	TRMT1	94	82.448	ENSEASG00005004050	TRMT1	98	82.109	Equus_asinus_asinus
ENSCPOG00000011754	TRMT1	94	82.770	ENSECAG00000016149	TRMT1	98	82.428	Equus_caballus
ENSCPOG00000011754	TRMT1	60	71.285	ENSEEUG00000014102	-	100	71.285	Erinaceus_europaeus
ENSCPOG00000011754	TRMT1	87	64.583	ENSELUG00000021659	trmt1	85	64.583	Esox_lucius
ENSCPOG00000011754	TRMT1	98	81.846	ENSFCAG00000000483	TRMT1	99	81.846	Felis_catus
ENSCPOG00000011754	TRMT1	97	85.404	ENSFDAG00000007386	TRMT1	97	85.404	Fukomys_damarensis
ENSCPOG00000011754	TRMT1	81	67.222	ENSFHEG00000012865	trmt1	90	67.037	Fundulus_heteroclitus
ENSCPOG00000011754	TRMT1	87	58.669	ENSGMOG00000006564	trmt1	98	58.669	Gadus_morhua
ENSCPOG00000011754	TRMT1	88	66.267	ENSGAFG00000011862	trmt1	90	66.267	Gambusia_affinis
ENSCPOG00000011754	TRMT1	95	59.141	ENSGACG00000000227	trmt1	99	59.429	Gasterosteus_aculeatus
ENSCPOG00000011754	TRMT1	89	67.940	ENSGAGG00000016432	TRMT1	89	67.940	Gopherus_agassizii
ENSCPOG00000011754	TRMT1	97	83.619	ENSGGOG00000014007	TRMT1	98	83.282	Gorilla_gorilla
ENSCPOG00000011754	TRMT1	85	57.295	ENSHBUG00000008821	trmt1	92	57.295	Haplochromis_burtoni
ENSCPOG00000011754	TRMT1	99	85.627	ENSHGLG00000015972	TRMT1	99	85.627	Heterocephalus_glaber_female
ENSCPOG00000011754	TRMT1	99	78.931	ENSHGLG00100018112	TRMT1	99	78.931	Heterocephalus_glaber_male
ENSCPOG00000011754	TRMT1	87	62.872	ENSHCOG00000009447	trmt1	88	62.872	Hippocampus_comes
ENSCPOG00000011754	TRMT1	87	63.823	ENSIPUG00000002899	trmt1	85	64.555	Ictalurus_punctatus
ENSCPOG00000011754	TRMT1	97	85.271	ENSSTOG00000012531	TRMT1	97	85.271	Ictidomys_tridecemlineatus
ENSCPOG00000011754	TRMT1	98	78.737	ENSJJAG00000017154	Trmt1	99	78.440	Jaculus_jaculus
ENSCPOG00000011754	TRMT1	87	67.776	ENSKMAG00000011809	trmt1	95	66.900	Kryptolebias_marmoratus
ENSCPOG00000011754	TRMT1	87	64.870	ENSLBEG00000012703	trmt1	84	64.870	Labrus_bergylta
ENSCPOG00000011754	TRMT1	87	56.822	ENSLACG00000014585	TRMT1	93	56.747	Latimeria_chalumnae
ENSCPOG00000011754	TRMT1	87	61.379	ENSLOCG00000006479	trmt1	97	61.512	Lepisosteus_oculatus
ENSCPOG00000011754	TRMT1	96	83.307	ENSLAFG00000014072	TRMT1	98	83.307	Loxodonta_africana
ENSCPOG00000011754	TRMT1	99	82.695	ENSMFAG00000033143	TRMT1	99	82.695	Macaca_fascicularis
ENSCPOG00000011754	TRMT1	98	77.160	ENSMMUG00000001167	TRMT1	99	77.160	Macaca_mulatta
ENSCPOG00000011754	TRMT1	99	82.542	ENSMNEG00000037867	TRMT1	99	82.542	Macaca_nemestrina
ENSCPOG00000011754	TRMT1	98	82.353	ENSMLEG00000016142	TRMT1	98	82.353	Mandrillus_leucophaeus
ENSCPOG00000011754	TRMT1	88	65.411	ENSMAMG00000004357	trmt1	87	65.411	Mastacembelus_armatus
ENSCPOG00000011754	TRMT1	87	64.174	ENSMZEG00005014510	trmt1	85	64.174	Maylandia_zebra
ENSCPOG00000011754	TRMT1	97	80.620	ENSMAUG00000011134	Trmt1	99	79.066	Mesocricetus_auratus
ENSCPOG00000011754	TRMT1	99	83.333	ENSMICG00000000793	TRMT1	99	83.333	Microcebus_murinus
ENSCPOG00000011754	TRMT1	97	80.310	ENSMOCG00000015895	Trmt1	97	80.310	Microtus_ochrogaster
ENSCPOG00000011754	TRMT1	87	65.324	ENSMMOG00000011097	trmt1	92	65.324	Mola_mola
ENSCPOG00000011754	TRMT1	90	74.419	ENSMODG00000011619	TRMT1	97	74.419	Monodelphis_domestica
ENSCPOG00000011754	TRMT1	98	80.675	MGP_CAROLIEiJ_G0031304	Trmt1	99	81.298	Mus_caroli
ENSCPOG00000011754	TRMT1	98	79.908	ENSMUSG00000001909	Trmt1	99	80.916	Mus_musculus
ENSCPOG00000011754	TRMT1	98	79.908	MGP_SPRETEiJ_G0032422	Trmt1	99	80.534	Mus_spretus
ENSCPOG00000011754	TRMT1	99	83.028	ENSMPUG00000004210	TRMT1	94	83.028	Mustela_putorius_furo
ENSCPOG00000011754	TRMT1	99	80.974	ENSMLUG00000012809	TRMT1	98	80.974	Myotis_lucifugus
ENSCPOG00000011754	TRMT1	98	78.287	ENSNGAG00000022486	Trmt1	98	78.287	Nannospalax_galili
ENSCPOG00000011754	TRMT1	75	67.164	ENSNBRG00000024376	trmt1	85	67.164	Neolamprologus_brichardi
ENSCPOG00000011754	TRMT1	78	84.132	ENSNLEG00000013019	-	98	84.132	Nomascus_leucogenys
ENSCPOG00000011754	TRMT1	90	74.536	ENSMEUG00000013756	TRMT1	99	74.536	Notamacropus_eugenii
ENSCPOG00000011754	TRMT1	78	84.323	ENSOPRG00000009471	-	79	84.323	Ochotona_princeps
ENSCPOG00000011754	TRMT1	99	86.544	ENSODEG00000010323	TRMT1	99	86.544	Octodon_degus
ENSCPOG00000011754	TRMT1	94	62.720	ENSONIG00000000400	trmt1	99	62.720	Oreochromis_niloticus
ENSCPOG00000011754	TRMT1	79	85.687	ENSOCUG00000021934	TRMT1	99	85.687	Oryctolagus_cuniculus
ENSCPOG00000011754	TRMT1	87	62.087	ENSORLG00000020074	trmt1	90	61.921	Oryzias_latipes
ENSCPOG00000011754	TRMT1	87	65.096	ENSORLG00020007561	trmt1	89	64.747	Oryzias_latipes_hni
ENSCPOG00000011754	TRMT1	87	65.096	ENSORLG00015006547	trmt1	86	65.096	Oryzias_latipes_hsok
ENSCPOG00000011754	TRMT1	87	65.165	ENSOMEG00000019343	trmt1	86	65.165	Oryzias_melastigma
ENSCPOG00000011754	TRMT1	93	81.190	ENSOGAG00000025576	TRMT1	97	81.190	Otolemur_garnettii
ENSCPOG00000011754	TRMT1	98	67.534	ENSOARG00000009397	TRMT1	92	67.688	Ovis_aries
ENSCPOG00000011754	TRMT1	97	75.078	ENSPPRG00000012117	TRMT1	99	75.078	Panthera_pardus
ENSCPOG00000011754	TRMT1	75	85.410	ENSPTIG00000008833	TRMT1	95	85.410	Panthera_tigris_altaica
ENSCPOG00000011754	TRMT1	97	83.463	ENSPTRG00000010557	TRMT1	98	83.127	Pan_troglodytes
ENSCPOG00000011754	TRMT1	97	61.550	ENSPTRG00000050421	-	99	61.550	Pan_troglodytes
ENSCPOG00000011754	TRMT1	84	69.691	ENSPANG00000034058	-	96	69.691	Papio_anubis
ENSCPOG00000011754	TRMT1	98	82.844	ENSPANG00000009247	TRMT1	98	82.844	Papio_anubis
ENSCPOG00000011754	TRMT1	87	66.608	ENSPKIG00000005309	trmt1	84	66.608	Paramormyrops_kingsleyae
ENSCPOG00000011754	TRMT1	90	56.494	ENSPSIG00000008762	TRMT1	87	56.494	Pelodiscus_sinensis
ENSCPOG00000011754	TRMT1	87	64.974	ENSPMGG00000019764	trmt1	90	64.974	Periophthalmus_magnuspinnatus
ENSCPOG00000011754	TRMT1	97	81.395	ENSPEMG00000016247	Trmt1	97	81.395	Peromyscus_maniculatus_bairdii
ENSCPOG00000011754	TRMT1	90	59.396	ENSPMAG00000004329	trmt1	92	59.396	Petromyzon_marinus
ENSCPOG00000011754	TRMT1	95	72.170	ENSPCIG00000019273	TRMT1	98	72.170	Phascolarctos_cinereus
ENSCPOG00000011754	TRMT1	88	67.295	ENSPFOG00000008527	trmt1	89	67.295	Poecilia_formosa
ENSCPOG00000011754	TRMT1	88	66.952	ENSPLAG00000018788	trmt1	89	69.376	Poecilia_latipinna
ENSCPOG00000011754	TRMT1	88	67.123	ENSPMEG00000013120	trmt1	89	67.123	Poecilia_mexicana
ENSCPOG00000011754	TRMT1	87	66.841	ENSPREG00000000211	trmt1	85	66.841	Poecilia_reticulata
ENSCPOG00000011754	TRMT1	97	83.775	ENSPPYG00000009622	TRMT1	98	83.437	Pongo_abelii
ENSCPOG00000011754	TRMT1	98	75.231	ENSPCAG00000003698	TRMT1	99	75.231	Procavia_capensis
ENSCPOG00000011754	TRMT1	97	83.282	ENSPCOG00000008653	TRMT1	98	83.282	Propithecus_coquereli
ENSCPOG00000011754	TRMT1	98	82.308	ENSPVAG00000015076	TRMT1	99	82.308	Pteropus_vampyrus
ENSCPOG00000011754	TRMT1	87	62.261	ENSPNYG00000013960	trmt1	92	62.261	Pundamilia_nyererei
ENSCPOG00000011754	TRMT1	81	67.223	ENSPNAG00000024859	trmt1	88	67.223	Pygocentrus_nattereri
ENSCPOG00000011754	TRMT1	94	81.410	ENSRNOG00000002914	Trmt1	97	81.410	Rattus_norvegicus
ENSCPOG00000011754	TRMT1	99	82.236	ENSRBIG00000038324	TRMT1	99	82.236	Rhinopithecus_bieti
ENSCPOG00000011754	TRMT1	95	64.706	ENSRBIG00000037505	-	97	64.511	Rhinopithecus_bieti
ENSCPOG00000011754	TRMT1	95	64.070	ENSRROG00000031847	-	97	63.880	Rhinopithecus_roxellana
ENSCPOG00000011754	TRMT1	99	82.083	ENSRROG00000028599	TRMT1	99	82.083	Rhinopithecus_roxellana
ENSCPOG00000011754	TRMT1	77	36.735	YDR120C	-	92	36.735	Saccharomyces_cerevisiae
ENSCPOG00000011754	TRMT1	94	81.059	ENSSBOG00000028861	TRMT1	99	80.484	Saimiri_boliviensis_boliviensis
ENSCPOG00000011754	TRMT1	89	75.639	ENSSHAG00000014381	TRMT1	94	75.639	Sarcophilus_harrisii
ENSCPOG00000011754	TRMT1	87	65.149	ENSSFOG00015004139	trmt1	90	62.075	Scleropages_formosus
ENSCPOG00000011754	TRMT1	87	65.854	ENSSMAG00000021136	trmt1	85	65.854	Scophthalmus_maximus
ENSCPOG00000011754	TRMT1	87	65.511	ENSSDUG00000012740	trmt1	84	65.511	Seriola_dumerili
ENSCPOG00000011754	TRMT1	87	65.165	ENSSLDG00000005971	trmt1	84	65.165	Seriola_lalandi_dorsalis
ENSCPOG00000011754	TRMT1	86	80.986	ENSSARG00000005138	TRMT1	100	80.986	Sorex_araneus
ENSCPOG00000011754	TRMT1	88	54.003	ENSSPUG00000001084	TRMT1	94	53.821	Sphenodon_punctatus
ENSCPOG00000011754	TRMT1	90	63.000	ENSSPAG00000007153	trmt1	97	63.000	Stegastes_partitus
ENSCPOG00000011754	TRMT1	95	84.579	ENSSSCG00000013744	TRMT1	99	84.579	Sus_scrofa
ENSCPOG00000011754	TRMT1	86	62.087	ENSTRUG00000010700	trmt1	86	62.435	Takifugu_rubripes
ENSCPOG00000011754	TRMT1	87	65.445	ENSTNIG00000018808	trmt1	98	65.445	Tetraodon_nigroviridis
ENSCPOG00000011754	TRMT1	96	81.034	ENSTTRG00000006379	TRMT1	99	80.769	Tursiops_truncatus
ENSCPOG00000011754	TRMT1	97	83.127	ENSUAMG00000022911	TRMT1	99	83.127	Ursus_americanus
ENSCPOG00000011754	TRMT1	95	83.121	ENSUMAG00000006027	TRMT1	99	83.121	Ursus_maritimus
ENSCPOG00000011754	TRMT1	99	81.583	ENSVVUG00000024177	TRMT1	99	81.583	Vulpes_vulpes
ENSCPOG00000011754	TRMT1	70	70.499	ENSXETG00000033863	TRMT1	92	70.499	Xenopus_tropicalis
ENSCPOG00000011754	TRMT1	87	67.190	ENSXCOG00000015733	trmt1	88	67.190	Xiphophorus_couchianus
ENSCPOG00000011754	TRMT1	87	66.608	ENSXMAG00000013823	trmt1	97	66.841	Xiphophorus_maculatus