EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011761 (Gene tree)
Gene ID: -
Gene Symbol: SRSF6
Alias: B52|SFRS6|SRP55
Full Name: serine and arginine rich splicing factor 6
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 2822 bases
Position: chrDS562900.1:9748527-9751348
Accession: 100734987
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010577	RRM_1	PF00076.22	1.4e-27	1	2
ENSCPOP00000010577	RRM_1	PF00076.22	1.4e-27	2	2
ENSCPOP00000029117	RRM_1	PF00076.22	2.1e-17	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000039347	SRSF6-202	408	-	ENSCPOP00000029117	135 (aa)	-	A0A286XUA4
ENSCPOT00000011876	SRSF6-201	957	XM_003467664	ENSCPOP00000010577	318 (aa)	XP_003467712	H0VJX8

Gene Model

Click here to download ENSCPOG00000011761's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011761's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011761	SRSF6	51	42.604	ENSCPOG00000032681	-	64	43.195
ENSCPOG00000011761	SRSF6	51	47.297	ENSCPOG00000033486	SRSF9	68	40.828
ENSCPOG00000011761	SRSF6	53	37.975	ENSCPOG00000012164	RBMX	77	37.975
ENSCPOG00000011761	SRSF6	56	34.667	ENSCPOG00000013194	RBM4	52	34.667
ENSCPOG00000011761	SRSF6	50	71.642	ENSCPOG00000039926	SRSF5	58	64.417
ENSCPOG00000011761	SRSF6	56	48.101	ENSCPOG00000033318	SRSF7	58	48.101

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011761	SRSF6	100	100.000	ENSG00000124193	SRSF6	100	100.000	Homo_sapiens
ENSCPOG00000011761	SRSF6	58	93.590	ENSAPOG00000016635	-	84	83.088	Acanthochromis_polyacanthus
ENSCPOG00000011761	SRSF6	70	93.182	ENSAMEG00000003710	SRSF6	94	66.667	Ailuropoda_melanoleuca
ENSCPOG00000011761	SRSF6	86	67.368	ENSACIG00000023658	-	50	89.506	Amphilophus_citrinellus
ENSCPOG00000011761	SRSF6	63	87.059	ENSACIG00000020091	-	95	80.315	Amphilophus_citrinellus
ENSCPOG00000011761	SRSF6	65	82.955	ENSAOCG00000004309	-	57	77.717	Amphiprion_ocellaris
ENSCPOG00000011761	SRSF6	92	67.939	ENSAOCG00000019438	-	98	67.939	Amphiprion_ocellaris
ENSCPOG00000011761	SRSF6	98	61.871	ENSAPEG00000013086	-	53	82.796	Amphiprion_percula
ENSCPOG00000011761	SRSF6	63	84.706	ENSAPEG00000020746	-	65	75.135	Amphiprion_percula
ENSCPOG00000011761	SRSF6	66	83.146	ENSATEG00000007255	-	71	74.595	Anabas_testudineus
ENSCPOG00000011761	SRSF6	58	94.872	ENSACAG00000002061	SRSF6	98	69.855	Anolis_carolinensis
ENSCPOG00000011761	SRSF6	100	100.000	ENSANAG00000024080	SRSF6	100	100.000	Aotus_nancymaae
ENSCPOG00000011761	SRSF6	54	89.041	ENSACLG00000024373	-	96	79.570	Astatotilapia_calliptera
ENSCPOG00000011761	SRSF6	55	91.892	ENSAMXG00000042692	-	96	78.519	Astyanax_mexicanus
ENSCPOG00000011761	SRSF6	55	93.243	ENSAMXG00000003101	-	50	80.851	Astyanax_mexicanus
ENSCPOG00000011761	SRSF6	100	99.259	ENSBTAG00000008527	SRSF6	100	99.259	Bos_taurus
ENSCPOG00000011761	SRSF6	100	100.000	ENSCJAG00000048403	SRSF6	100	100.000	Callithrix_jacchus
ENSCPOG00000011761	SRSF6	100	99.259	ENSCAFG00000009289	SRSF6	100	99.259	Canis_familiaris
ENSCPOG00000011761	SRSF6	100	99.259	ENSCAFG00020013559	SRSF6	100	99.259	Canis_lupus_dingo
ENSCPOG00000011761	SRSF6	58	96.154	ENSCHIG00000009148	-	94	79.321	Capra_hircus
ENSCPOG00000011761	SRSF6	100	99.259	ENSCHIG00000015890	-	100	99.259	Capra_hircus
ENSCPOG00000011761	SRSF6	74	92.982	ENSTSYG00000026476	SRSF6	93	61.728	Carlito_syrichta
ENSCPOG00000011761	SRSF6	95	73.718	ENSCCAG00000018540	-	92	72.990	Cebus_capucinus
ENSCPOG00000011761	SRSF6	100	100.000	ENSCCAG00000026018	-	100	100.000	Cebus_capucinus
ENSCPOG00000011761	SRSF6	100	100.000	ENSCATG00000030794	SRSF6	100	100.000	Cercocebus_atys
ENSCPOG00000011761	SRSF6	100	100.000	ENSCLAG00000010247	SRSF6	100	100.000	Chinchilla_lanigera
ENSCPOG00000011761	SRSF6	98	68.613	ENSCSAG00000014022	SRSF6	94	80.556	Chlorocebus_sabaeus
ENSCPOG00000011761	SRSF6	58	97.436	ENSCPBG00000018200	SRSF6	94	72.308	Chrysemys_picta_bellii
ENSCPOG00000011761	SRSF6	98	68.613	ENSCANG00000037774	-	94	80.247	Colobus_angolensis_palliatus
ENSCPOG00000011761	SRSF6	70	95.652	ENSCANG00000042529	-	93	62.346	Colobus_angolensis_palliatus
ENSCPOG00000011761	SRSF6	100	98.519	ENSCGRG00001022339	Srsf6	100	98.519	Cricetulus_griseus_chok1gshd
ENSCPOG00000011761	SRSF6	58	93.590	ENSCSEG00000019778	SRSF6	90	84.252	Cynoglossus_semilaevis
ENSCPOG00000011761	SRSF6	58	92.308	ENSCVAG00000001863	SRSF6	95	85.039	Cyprinodon_variegatus
ENSCPOG00000011761	SRSF6	55	90.541	ENSDARG00000016783	srsf6b	87	89.157	Danio_rerio
ENSCPOG00000011761	SRSF6	98	68.613	ENSDNOG00000008410	SRSF6	94	78.704	Dasypus_novemcinctus
ENSCPOG00000011761	SRSF6	100	100.000	ENSDORG00000028378	Srsf6	100	100.000	Dipodomys_ordii
ENSCPOG00000011761	SRSF6	58	94.872	ENSETEG00000006221	SRSF6	94	73.765	Echinops_telfairi
ENSCPOG00000011761	SRSF6	70	95.455	ENSEASG00005023429	SRSF6	94	80.186	Equus_asinus_asinus
ENSCPOG00000011761	SRSF6	70	95.455	ENSECAG00000023932	SRSF6	94	80.186	Equus_caballus
ENSCPOG00000011761	SRSF6	98	59.286	ENSELUG00000024182	SRSF6	85	87.356	Esox_lucius
ENSCPOG00000011761	SRSF6	73	77.778	ENSELUG00000013506	SRSF6	88	77.778	Esox_lucius
ENSCPOG00000011761	SRSF6	70	93.182	ENSFCAG00000032814	SRSF6	94	79.630	Felis_catus
ENSCPOG00000011761	SRSF6	78	94.366	ENSFDAG00000012191	SRSF6	93	62.654	Fukomys_damarensis
ENSCPOG00000011761	SRSF6	87	65.232	ENSFHEG00000023065	srsf6a	55	82.065	Fundulus_heteroclitus
ENSCPOG00000011761	SRSF6	61	76.829	ENSGMOG00000006105	srsf6a	57	70.909	Gadus_morhua
ENSCPOG00000011761	SRSF6	56	90.789	ENSGMOG00000014458	srsf6a	67	64.228	Gadus_morhua
ENSCPOG00000011761	SRSF6	100	97.037	ENSGALG00000000990	SRSF6	100	97.037	Gallus_gallus
ENSCPOG00000011761	SRSF6	58	92.308	ENSGAFG00000019088	-	72	82.400	Gambusia_affinis
ENSCPOG00000011761	SRSF6	98	61.194	ENSGACG00000006084	srsf6a	53	77.419	Gasterosteus_aculeatus
ENSCPOG00000011761	SRSF6	58	97.436	ENSGAGG00000003238	SRSF6	94	72.308	Gopherus_agassizii
ENSCPOG00000011761	SRSF6	100	100.000	ENSGGOG00000009808	SRSF6	100	100.000	Gorilla_gorilla
ENSCPOG00000011761	SRSF6	56	89.474	ENSHBUG00000006386	-	58	78.261	Haplochromis_burtoni
ENSCPOG00000011761	SRSF6	98	57.576	ENSHGLG00000007701	-	99	59.394	Heterocephalus_glaber_female
ENSCPOG00000011761	SRSF6	100	100.000	ENSHGLG00000007348	SRSF6	100	100.000	Heterocephalus_glaber_female
ENSCPOG00000011761	SRSF6	78	97.183	ENSHGLG00100005043	SRSF6	93	63.580	Heterocephalus_glaber_male
ENSCPOG00000011761	SRSF6	58	89.744	ENSHCOG00000002740	srsf6a	51	84.242	Hippocampus_comes
ENSCPOG00000011761	SRSF6	58	92.308	ENSIPUG00000004776	-	64	80.978	Ictalurus_punctatus
ENSCPOG00000011761	SRSF6	53	78.409	ENSIPUG00000016856	SRSF6	58	68.293	Ictalurus_punctatus
ENSCPOG00000011761	SRSF6	100	100.000	ENSSTOG00000010866	SRSF6	100	100.000	Ictidomys_tridecemlineatus
ENSCPOG00000011761	SRSF6	87	62.021	ENSKMAG00000011934	srsf6a	59	80.435	Kryptolebias_marmoratus
ENSCPOG00000011761	SRSF6	100	68.362	ENSLACG00000005466	SRSF6	96	64.417	Latimeria_chalumnae
ENSCPOG00000011761	SRSF6	100	100.000	ENSMFAG00000036925	SRSF6	100	100.000	Macaca_fascicularis
ENSCPOG00000011761	SRSF6	100	100.000	ENSMMUG00000006742	SRSF6	100	100.000	Macaca_mulatta
ENSCPOG00000011761	SRSF6	100	98.519	ENSMNEG00000027392	-	100	98.519	Macaca_nemestrina
ENSCPOG00000011761	SRSF6	58	97.436	ENSMNEG00000038270	-	94	79.630	Macaca_nemestrina
ENSCPOG00000011761	SRSF6	63	87.059	ENSMAMG00000023477	-	89	87.059	Mastacembelus_armatus
ENSCPOG00000011761	SRSF6	98	61.871	ENSMAMG00000017161	srsf6a	64	75.336	Mastacembelus_armatus
ENSCPOG00000011761	SRSF6	98	58.333	ENSMZEG00005020658	-	54	83.030	Maylandia_zebra
ENSCPOG00000011761	SRSF6	56	89.474	ENSMZEG00005008032	-	57	78.261	Maylandia_zebra
ENSCPOG00000011761	SRSF6	100	98.519	ENSMAUG00000019086	-	100	98.519	Mesocricetus_auratus
ENSCPOG00000011761	SRSF6	100	100.000	ENSMICG00000008537	SRSF6	100	100.000	Microcebus_murinus
ENSCPOG00000011761	SRSF6	58	92.308	ENSMMOG00000015241	-	78	90.361	Mola_mola
ENSCPOG00000011761	SRSF6	58	97.436	ENSMODG00000003107	SRSF6	95	71.207	Monodelphis_domestica
ENSCPOG00000011761	SRSF6	100	98.519	MGP_CAROLIEiJ_G0024606	Srsf6	100	98.519	Mus_caroli
ENSCPOG00000011761	SRSF6	100	98.519	ENSMUSG00000016921	Srsf6	100	98.519	Mus_musculus
ENSCPOG00000011761	SRSF6	100	98.519	MGP_PahariEiJ_G0026050	Srsf6	100	98.519	Mus_pahari
ENSCPOG00000011761	SRSF6	100	98.519	MGP_SPRETEiJ_G0025528	Srsf6	100	98.519	Mus_spretus
ENSCPOG00000011761	SRSF6	58	98.718	ENSMPUG00000017692	SRSF6	99	78.125	Mustela_putorius_furo
ENSCPOG00000011761	SRSF6	100	100.000	ENSNGAG00000017560	Srsf6	100	100.000	Nannospalax_galili
ENSCPOG00000011761	SRSF6	58	93.590	ENSNBRG00000001846	-	52	82.258	Neolamprologus_brichardi
ENSCPOG00000011761	SRSF6	56	89.474	ENSNBRG00000014709	-	58	78.261	Neolamprologus_brichardi
ENSCPOG00000011761	SRSF6	100	100.000	ENSNLEG00000006524	SRSF6	100	100.000	Nomascus_leucogenys
ENSCPOG00000011761	SRSF6	58	97.436	ENSMEUG00000014615	SRSF6	99	76.221	Notamacropus_eugenii
ENSCPOG00000011761	SRSF6	100	100.000	ENSODEG00000016510	-	100	100.000	Octodon_degus
ENSCPOG00000011761	SRSF6	61	86.585	ENSONIG00000020247	-	53	78.804	Oreochromis_niloticus
ENSCPOG00000011761	SRSF6	51	61.111	ENSOCUG00000023999	-	63	61.111	Oryctolagus_cuniculus
ENSCPOG00000011761	SRSF6	98	40.541	ENSOCUG00000009785	-	98	65.878	Oryctolagus_cuniculus
ENSCPOG00000011761	SRSF6	58	94.872	ENSORLG00020017506	srsf6a	90	70.323	Oryzias_latipes_hni
ENSCPOG00000011761	SRSF6	98	68.613	ENSOGAG00000014468	SRSF6	94	78.328	Otolemur_garnettii
ENSCPOG00000011761	SRSF6	56	93.333	ENSOARG00000003117	SRSF6	94	75.926	Ovis_aries
ENSCPOG00000011761	SRSF6	58	92.308	ENSPPAG00000043131	-	96	62.424	Pan_paniscus
ENSCPOG00000011761	SRSF6	98	67.883	ENSPPAG00000034327	-	94	80.556	Pan_paniscus
ENSCPOG00000011761	SRSF6	70	93.182	ENSPPRG00000008917	SRSF6	94	79.630	Panthera_pardus
ENSCPOG00000011761	SRSF6	100	100.000	ENSPTRG00000044686	-	100	100.000	Pan_troglodytes
ENSCPOG00000011761	SRSF6	58	92.308	ENSPTRG00000046274	-	96	62.424	Pan_troglodytes
ENSCPOG00000011761	SRSF6	100	100.000	ENSPANG00000035224	SRSF6	100	100.000	Papio_anubis
ENSCPOG00000011761	SRSF6	59	77.500	ENSPKIG00000015703	-	95	61.745	Paramormyrops_kingsleyae
ENSCPOG00000011761	SRSF6	98	62.121	ENSPKIG00000018463	-	83	89.286	Paramormyrops_kingsleyae
ENSCPOG00000011761	SRSF6	58	93.590	ENSPKIG00000015603	-	88	84.252	Paramormyrops_kingsleyae
ENSCPOG00000011761	SRSF6	89	63.462	ENSPMGG00000014963	srsf6a	55	83.696	Periophthalmus_magnuspinnatus
ENSCPOG00000011761	SRSF6	85	87.931	ENSPEMG00000022405	-	96	87.931	Peromyscus_maniculatus_bairdii
ENSCPOG00000011761	SRSF6	100	98.519	ENSPCIG00000003820	SRSF6	100	98.519	Phascolarctos_cinereus
ENSCPOG00000011761	SRSF6	58	92.308	ENSPFOG00000006437	srsf6a	50	77.895	Poecilia_formosa
ENSCPOG00000011761	SRSF6	58	92.308	ENSPLAG00000009243	srsf6a	80	82.677	Poecilia_latipinna
ENSCPOG00000011761	SRSF6	58	92.308	ENSPMEG00000006042	SRSF6	54	81.081	Poecilia_mexicana
ENSCPOG00000011761	SRSF6	59	91.139	ENSPREG00000001040	srsf6a	87	83.846	Poecilia_reticulata
ENSCPOG00000011761	SRSF6	98	68.613	ENSPPYG00000011019	SRSF6	94	80.864	Pongo_abelii
ENSCPOG00000011761	SRSF6	58	98.718	ENSPCAG00000010954	SRSF6	96	74.923	Procavia_capensis
ENSCPOG00000011761	SRSF6	100	100.000	ENSPCOG00000026364	SRSF6	100	100.000	Propithecus_coquereli
ENSCPOG00000011761	SRSF6	70	90.374	ENSPVAG00000015232	SRSF6	94	77.160	Pteropus_vampyrus
ENSCPOG00000011761	SRSF6	58	93.590	ENSPNYG00000011272	-	51	82.258	Pundamilia_nyererei
ENSCPOG00000011761	SRSF6	56	89.474	ENSPNYG00000004944	-	58	78.261	Pundamilia_nyererei
ENSCPOG00000011761	SRSF6	59	95.000	ENSPNAG00000023179	-	94	84.252	Pygocentrus_nattereri
ENSCPOG00000011761	SRSF6	58	97.436	ENSRNOG00000006380	Srsf6	95	79.321	Rattus_norvegicus
ENSCPOG00000011761	SRSF6	100	96.296	ENSRBIG00000041414	SRSF6	100	96.296	Rhinopithecus_bieti
ENSCPOG00000011761	SRSF6	100	100.000	ENSRROG00000029989	SRSF6	100	100.000	Rhinopithecus_roxellana
ENSCPOG00000011761	SRSF6	70	75.532	ENSSBOG00000034078	-	93	64.952	Saimiri_boliviensis_boliviensis
ENSCPOG00000011761	SRSF6	100	100.000	ENSSBOG00000033708	-	100	100.000	Saimiri_boliviensis_boliviensis
ENSCPOG00000011761	SRSF6	58	97.436	ENSSHAG00000012805	SRSF6	95	71.207	Sarcophilus_harrisii
ENSCPOG00000011761	SRSF6	55	93.243	ENSSFOG00015015169	SRSF6	60	83.696	Scleropages_formosus
ENSCPOG00000011761	SRSF6	56	88.158	ENSSMAG00000017447	-	55	75.000	Scophthalmus_maximus
ENSCPOG00000011761	SRSF6	59	92.500	ENSSMAG00000014861	-	95	67.969	Scophthalmus_maximus
ENSCPOG00000011761	SRSF6	98	61.151	ENSSDUG00000016097	srsf6a	53	82.258	Seriola_dumerili
ENSCPOG00000011761	SRSF6	63	87.059	ENSSDUG00000011036	-	90	87.059	Seriola_dumerili
ENSCPOG00000011761	SRSF6	63	87.059	ENSSLDG00000014858	-	90	87.059	Seriola_lalandi_dorsalis
ENSCPOG00000011761	SRSF6	98	61.871	ENSSLDG00000022841	srsf6a	54	82.258	Seriola_lalandi_dorsalis
ENSCPOG00000011761	SRSF6	100	97.037	ENSSPUG00000004967	SRSF6	100	97.037	Sphenodon_punctatus
ENSCPOG00000011761	SRSF6	63	84.706	ENSSPAG00000021913	-	86	84.706	Stegastes_partitus
ENSCPOG00000011761	SRSF6	98	61.871	ENSSPAG00000002362	srsf6a	67	80.952	Stegastes_partitus
ENSCPOG00000011761	SRSF6	70	93.478	ENSSSCG00000007362	SRSF6	96	80.969	Sus_scrofa
ENSCPOG00000011761	SRSF6	58	97.436	ENSTGUG00000003455	SRSF6	94	73.089	Taeniopygia_guttata
ENSCPOG00000011761	SRSF6	59	92.500	ENSTRUG00000021397	-	87	92.500	Takifugu_rubripes
ENSCPOG00000011761	SRSF6	58	93.590	ENSTNIG00000001692	srsf6a	57	80.645	Tetraodon_nigroviridis
ENSCPOG00000011761	SRSF6	100	99.259	ENSUAMG00000003559	SRSF6	100	99.259	Ursus_americanus
ENSCPOG00000011761	SRSF6	100	78.519	ENSVVUG00000019276	-	100	78.519	Vulpes_vulpes
ENSCPOG00000011761	SRSF6	58	92.308	ENSXMAG00000021849	srsf6a	55	80.978	Xiphophorus_maculatus