EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000011887 (Gene tree)
Gene ID: 100725944
Gene Symbol: HNRNPU
Alias: C1orf199|FLJ30202|FLJ37978|HNRNPU-AS1|HNRPU|NCRNA00201|SAF-A|hnRNPU
Full Name: heterogeneous nuclear ribonucleoprotein U
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 10250 bases
Position: chrDS562868.1:11542771-11553020
Accession: 100725944
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010693	SAP	PF02037.27	1.6e-10	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012002	HNRNPU-201	3782	XM_003474260	ENSCPOP00000010693	822 (aa)	XP_003474308	H0VK81

Gene Model

Click here to download ENSCPOG00000011887's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000011887's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000011887	HNRNPU	60	59.318	ENSCPOG00000008101	-	65	58.537

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000011887	HNRNPU	100	97.939	ENSG00000153187	HNRNPU	100	100.000	Homo_sapiens
ENSCPOG00000011887	HNRNPU	79	79.167	ENSAPOG00000017400	hnrnpub	87	79.167	Acanthochromis_polyacanthus
ENSCPOG00000011887	HNRNPU	100	94.189	ENSAMEG00000009145	HNRNPU	100	94.310	Ailuropoda_melanoleuca
ENSCPOG00000011887	HNRNPU	81	60.197	ENSACIG00000012138	hnrnpub	87	83.333	Amphilophus_citrinellus
ENSCPOG00000011887	HNRNPU	79	77.083	ENSAOCG00000015843	hnrnpub	89	63.077	Amphiprion_ocellaris
ENSCPOG00000011887	HNRNPU	79	77.083	ENSAPEG00000014679	hnrnpub	89	63.077	Amphiprion_percula
ENSCPOG00000011887	HNRNPU	74	74.510	ENSATEG00000016178	hnrnpub	81	59.736	Anabas_testudineus
ENSCPOG00000011887	HNRNPU	81	84.296	ENSACAG00000004511	HNRNPU	72	89.701	Anolis_carolinensis
ENSCPOG00000011887	HNRNPU	100	95.515	ENSANAG00000033895	-	100	95.515	Aotus_nancymaae
ENSCPOG00000011887	HNRNPU	78	85.714	ENSACLG00000008165	hnrnpub	85	85.714	Astatotilapia_calliptera
ENSCPOG00000011887	HNRNPU	100	98.182	ENSBTAG00000007606	HNRNPU	100	98.182	Bos_taurus
ENSCPOG00000011887	HNRNPU	100	97.818	ENSCJAG00000016914	HNRNPU	100	97.818	Callithrix_jacchus
ENSCPOG00000011887	HNRNPU	100	96.121	ENSCAFG00020000918	HNRNPU	100	96.121	Canis_lupus_dingo
ENSCPOG00000011887	HNRNPU	100	95.879	ENSCHIG00000004900	HNRNPU	100	95.879	Capra_hircus
ENSCPOG00000011887	HNRNPU	100	97.576	ENSCCAG00000037859	-	100	97.576	Cebus_capucinus
ENSCPOG00000011887	HNRNPU	100	97.576	ENSCATG00000035273	HNRNPU	100	97.576	Cercocebus_atys
ENSCPOG00000011887	HNRNPU	100	99.757	ENSCLAG00000007100	HNRNPU	100	99.757	Chinchilla_lanigera
ENSCPOG00000011887	HNRNPU	100	95.273	ENSCSAG00000009219	HNRNPU	100	95.273	Chlorocebus_sabaeus
ENSCPOG00000011887	HNRNPU	79	98.333	ENSCHOG00000001387	HNRNPU	79	98.333	Choloepus_hoffmanni
ENSCPOG00000011887	HNRNPU	100	79.905	ENSCPBG00000009415	HNRNPU	98	81.125	Chrysemys_picta_bellii
ENSCPOG00000011887	HNRNPU	100	93.576	ENSCANG00000022780	HNRNPU	100	93.091	Colobus_angolensis_palliatus
ENSCPOG00000011887	HNRNPU	100	95.499	ENSCGRG00001020525	Hnrnpu	100	94.526	Cricetulus_griseus_chok1gshd
ENSCPOG00000011887	HNRNPU	80	68.852	ENSCSEG00000010804	hnrnpub	89	65.625	Cynoglossus_semilaevis
ENSCPOG00000011887	HNRNPU	79	73.214	ENSCVAG00000004280	hnrnpub	85	73.214	Cyprinodon_variegatus
ENSCPOG00000011887	HNRNPU	78	83.333	ENSDARG00000004735	hnrnpub	90	59.056	Danio_rerio
ENSCPOG00000011887	HNRNPU	79	62.319	ENSDARG00000015206	hnrnpua	89	62.319	Danio_rerio
ENSCPOG00000011887	HNRNPU	79	99.832	ENSDNOG00000000215	HNRNPU	88	99.832	Dasypus_novemcinctus
ENSCPOG00000011887	HNRNPU	100	90.998	ENSDORG00000015491	Hnrnpu	100	90.998	Dipodomys_ordii
ENSCPOG00000011887	HNRNPU	100	91.273	ENSETEG00000014565	HNRNPU	100	90.424	Echinops_telfairi
ENSCPOG00000011887	HNRNPU	100	96.000	ENSEASG00005003017	HNRNPU	100	96.000	Equus_asinus_asinus
ENSCPOG00000011887	HNRNPU	100	95.879	ENSECAG00000007955	HNRNPU	100	95.879	Equus_caballus
ENSCPOG00000011887	HNRNPU	89	56.169	ENSELUG00000011966	hnrnpua	67	72.973	Esox_lucius
ENSCPOG00000011887	HNRNPU	73	57.632	ENSELUG00000010733	hnrnpub	62	65.996	Esox_lucius
ENSCPOG00000011887	HNRNPU	100	95.874	ENSFCAG00000002156	HNRNPU	99	95.874	Felis_catus
ENSCPOG00000011887	HNRNPU	91	96.602	ENSFDAG00000006026	HNRNPU	100	96.602	Fukomys_damarensis
ENSCPOG00000011887	HNRNPU	80	71.429	ENSFHEG00000022639	hnrnpub	69	71.429	Fundulus_heteroclitus
ENSCPOG00000011887	HNRNPU	73	58.665	ENSGMOG00000001755	hnrnpub	77	61.120	Gadus_morhua
ENSCPOG00000011887	HNRNPU	100	78.824	ENSGALG00000010671	HNRNPU	100	78.000	Gallus_gallus
ENSCPOG00000011887	HNRNPU	62	80.435	ENSGAFG00000009369	hnrnpub	84	80.435	Gambusia_affinis
ENSCPOG00000011887	HNRNPU	74	60.697	ENSGACG00000004679	hnrnpub	73	61.794	Gasterosteus_aculeatus
ENSCPOG00000011887	HNRNPU	100	97.455	ENSGGOG00000004061	HNRNPU	100	97.455	Gorilla_gorilla
ENSCPOG00000011887	HNRNPU	78	85.714	ENSHBUG00000012290	hnrnpub	85	85.714	Haplochromis_burtoni
ENSCPOG00000011887	HNRNPU	100	97.821	ENSHGLG00000010594	-	100	97.821	Heterocephalus_glaber_female
ENSCPOG00000011887	HNRNPU	81	99.172	ENSHGLG00100015093	HNRNPU	100	99.172	Heterocephalus_glaber_male
ENSCPOG00000011887	HNRNPU	78	80.435	ENSIPUG00000007749	hnrnpu	92	74.510	Ictalurus_punctatus
ENSCPOG00000011887	HNRNPU	100	96.602	ENSJJAG00000011371	Hnrnpu	100	96.602	Jaculus_jaculus
ENSCPOG00000011887	HNRNPU	81	64.615	ENSKMAG00000004532	hnrnpub	88	60.563	Kryptolebias_marmoratus
ENSCPOG00000011887	HNRNPU	82	60.000	ENSLBEG00000022520	hnrnpub	80	58.372	Labrus_bergylta
ENSCPOG00000011887	HNRNPU	72	71.262	ENSLACG00000017463	HNRNPU	74	70.569	Latimeria_chalumnae
ENSCPOG00000011887	HNRNPU	73	69.677	ENSLOCG00000016652	hnrnpua	76	66.511	Lepisosteus_oculatus
ENSCPOG00000011887	HNRNPU	100	97.212	ENSLAFG00000021377	HNRNPU	100	97.212	Loxodonta_africana
ENSCPOG00000011887	HNRNPU	100	97.576	ENSMFAG00000037308	HNRNPU	100	97.576	Macaca_fascicularis
ENSCPOG00000011887	HNRNPU	100	95.273	ENSMMUG00000021098	HNRNPU	100	95.273	Macaca_mulatta
ENSCPOG00000011887	HNRNPU	100	97.576	ENSMNEG00000043645	HNRNPU	100	97.576	Macaca_nemestrina
ENSCPOG00000011887	HNRNPU	80	75.000	ENSMAMG00000007196	hnrnpub	86	75.000	Mastacembelus_armatus
ENSCPOG00000011887	HNRNPU	78	85.714	ENSMZEG00005003185	hnrnpub	85	85.714	Maylandia_zebra
ENSCPOG00000011887	HNRNPU	100	94.417	ENSMAUG00000008842	Hnrnpu	100	94.282	Mesocricetus_auratus
ENSCPOG00000011887	HNRNPU	100	97.697	ENSMICG00000004616	HNRNPU	100	97.697	Microcebus_murinus
ENSCPOG00000011887	HNRNPU	100	94.417	ENSMOCG00000015623	Hnrnpu	100	94.282	Microtus_ochrogaster
ENSCPOG00000011887	HNRNPU	100	90.235	ENSMODG00000006515	HNRNPU	100	92.235	Monodelphis_domestica
ENSCPOG00000011887	HNRNPU	77	72.549	ENSMALG00000018243	hnrnpub	79	63.316	Monopterus_albus
ENSCPOG00000011887	HNRNPU	100	94.532	MGP_CAROLIEiJ_G0014962	Hnrnpu	100	94.532	Mus_caroli
ENSCPOG00000011887	HNRNPU	100	94.654	ENSMUSG00000039630	Hnrnpu	100	94.654	Mus_musculus
ENSCPOG00000011887	HNRNPU	100	93.811	MGP_PahariEiJ_G0028193	Hnrnpu	100	93.811	Mus_pahari
ENSCPOG00000011887	HNRNPU	100	94.654	MGP_SPRETEiJ_G0015761	Hnrnpu	100	94.654	Mus_spretus
ENSCPOG00000011887	HNRNPU	73	96.990	ENSMLUG00000000475	HNRNPU	74	97.311	Myotis_lucifugus
ENSCPOG00000011887	HNRNPU	100	95.255	ENSNGAG00000019075	Hnrnpu	100	95.255	Nannospalax_galili
ENSCPOG00000011887	HNRNPU	78	85.714	ENSNBRG00000017855	hnrnpub	85	85.714	Neolamprologus_brichardi
ENSCPOG00000011887	HNRNPU	99	87.923	ENSMEUG00000000541	HNRNPU	100	90.097	Notamacropus_eugenii
ENSCPOG00000011887	HNRNPU	70	99.029	ENSODEG00000014458	-	100	99.029	Octodon_degus
ENSCPOG00000011887	HNRNPU	78	85.714	ENSONIG00000001260	hnrnpub	88	85.714	Oreochromis_niloticus
ENSCPOG00000011887	HNRNPU	98	98.020	ENSOCUG00000014469	HNRNPU	93	98.020	Oryctolagus_cuniculus
ENSCPOG00000011887	HNRNPU	79	80.435	ENSORLG00020005363	hnrnpub	86	85.714	Oryzias_latipes_hni
ENSCPOG00000011887	HNRNPU	79	80.435	ENSORLG00015001190	hnrnpub	86	85.714	Oryzias_latipes_hsok
ENSCPOG00000011887	HNRNPU	79	80.435	ENSOMEG00000014951	hnrnpub	86	85.714	Oryzias_melastigma
ENSCPOG00000011887	HNRNPU	100	95.394	ENSOGAG00000014024	HNRNPU	100	95.394	Otolemur_garnettii
ENSCPOG00000011887	HNRNPU	81	98.831	ENSOARG00000004985	HNRNPU	91	99.161	Ovis_aries
ENSCPOG00000011887	HNRNPU	100	97.939	ENSPPAG00000038652	HNRNPU	100	97.939	Pan_paniscus
ENSCPOG00000011887	HNRNPU	100	97.939	ENSPPRG00000002662	HNRNPU	100	97.939	Panthera_pardus
ENSCPOG00000011887	HNRNPU	100	97.939	ENSPTRG00000002182	HNRNPU	100	97.939	Pan_troglodytes
ENSCPOG00000011887	HNRNPU	100	95.273	ENSPANG00000011643	HNRNPU	100	95.273	Papio_anubis
ENSCPOG00000011887	HNRNPU	85	66.614	ENSPKIG00000022332	hnrnpub	84	80.435	Paramormyrops_kingsleyae
ENSCPOG00000011887	HNRNPU	99	54.959	ENSPKIG00000006885	hnrnpua	78	66.826	Paramormyrops_kingsleyae
ENSCPOG00000011887	HNRNPU	100	93.795	ENSPCIG00000008657	HNRNPU	100	93.914	Phascolarctos_cinereus
ENSCPOG00000011887	HNRNPU	64	65.625	ENSPFOG00000002908	hnrnpub	89	62.162	Poecilia_formosa
ENSCPOG00000011887	HNRNPU	81	65.625	ENSPLAG00000004160	hnrnpub	89	62.162	Poecilia_latipinna
ENSCPOG00000011887	HNRNPU	100	97.576	ENSPCOG00000018655	-	100	97.576	Propithecus_coquereli
ENSCPOG00000011887	HNRNPU	100	90.545	ENSPCOG00000003883	-	100	90.424	Propithecus_coquereli
ENSCPOG00000011887	HNRNPU	100	98.061	ENSPVAG00000002581	HNRNPU	100	98.061	Pteropus_vampyrus
ENSCPOG00000011887	HNRNPU	78	85.714	ENSPNYG00000021642	hnrnpub	85	85.714	Pundamilia_nyererei
ENSCPOG00000011887	HNRNPU	73	65.231	ENSPNAG00000001055	hnrnpub	79	64.241	Pygocentrus_nattereri
ENSCPOG00000011887	HNRNPU	100	94.404	ENSRNOG00000033790	Hnrnpu	100	94.404	Rattus_norvegicus
ENSCPOG00000011887	HNRNPU	100	94.404	ENSRBIG00000031519	HNRNPU	100	94.404	Rhinopithecus_bieti
ENSCPOG00000011887	HNRNPU	100	95.394	ENSRROG00000041642	HNRNPU	100	95.394	Rhinopithecus_roxellana
ENSCPOG00000011887	HNRNPU	73	65.091	ENSSFOG00015019004	hnrnpu	77	67.572	Scleropages_formosus
ENSCPOG00000011887	HNRNPU	85	66.924	ENSSFOG00015001124	hnrnpub	86	65.278	Scleropages_formosus
ENSCPOG00000011887	HNRNPU	80	72.549	ENSSDUG00000005912	hnrnpub	85	72.549	Seriola_dumerili
ENSCPOG00000011887	HNRNPU	73	55.007	ENSSLDG00000004899	hnrnpub	79	56.437	Seriola_lalandi_dorsalis
ENSCPOG00000011887	HNRNPU	100	78.471	ENSSPUG00000011393	HNRNPU	100	79.447	Sphenodon_punctatus
ENSCPOG00000011887	HNRNPU	73	80.435	ENSSPAG00000011853	hnrnpub	80	58.824	Stegastes_partitus
ENSCPOG00000011887	HNRNPU	100	97.939	ENSSSCG00000010877	HNRNPU	100	97.939	Sus_scrofa
ENSCPOG00000011887	HNRNPU	85	57.504	ENSTRUG00000007759	hnrnpub	85	66.667	Takifugu_rubripes
ENSCPOG00000011887	HNRNPU	87	56.109	ENSTNIG00000009725	hnrnpub	90	70.213	Tetraodon_nigroviridis
ENSCPOG00000011887	HNRNPU	71	100.000	ENSTTRG00000005281	HNRNPU	71	100.000	Tursiops_truncatus
ENSCPOG00000011887	HNRNPU	100	98.424	ENSUAMG00000021120	HNRNPU	100	98.424	Ursus_americanus
ENSCPOG00000011887	HNRNPU	99	84.088	ENSUMAG00000012322	HNRNPU	97	94.671	Ursus_maritimus
ENSCPOG00000011887	HNRNPU	78	93.233	ENSVPAG00000010520	HNRNPU	91	93.636	Vicugna_pacos
ENSCPOG00000011887	HNRNPU	100	96.121	ENSVVUG00000026524	HNRNPU	100	96.121	Vulpes_vulpes
ENSCPOG00000011887	HNRNPU	99	65.505	ENSXETG00000011386	hnrnpu	99	68.220	Xenopus_tropicalis
ENSCPOG00000011887	HNRNPU	83	51.674	ENSXMAG00000010356	hnrnpub	96	80.435	Xiphophorus_maculatus