EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000012036 (Gene tree)
Gene ID: 100722175
Gene Symbol: KARS
Alias: DFNB89|KARS1|KARS2
Full Name: lysyl-tRNA synthetase
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 23877 bases
Position: chrDS562877.1:1714420-1738296
Accession: 100722175
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000030737	tRNA_anti-codon	PF01336.25	1.1e-14	1	1
ENSCPOP00000010828	tRNA_anti-codon	PF01336.25	1.5e-14	1	1
ENSCPOP00000030737	tRNA-synt_2	PF00152.20	1.3e-81	1	1
ENSCPOP00000010828	tRNA-synt_2	PF00152.20	1.5e-81	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012152	KARS-202	2383	XM_003471982	ENSCPOP00000010828	623 (aa)	XP_003472030	H0VKJ2
ENSCPOT00000039523	KARS-201	2223	XM_005004598	ENSCPOP00000030737	595 (aa)	XP_005004655	A0A286XYV9

Gene Model

Click here to download ENSCPOG00000012036's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012036's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000012036	KARS	100	94.305	ENSG00000065427	KARS	100	97.059	Homo_sapiens
ENSCPOG00000012036	KARS	98	79.690	ENSAPOG00000010997	kars	99	79.690	Acanthochromis_polyacanthus
ENSCPOG00000012036	KARS	100	91.520	ENSAMEG00000005347	KARS	100	92.480	Ailuropoda_melanoleuca
ENSCPOG00000012036	KARS	99	75.169	ENSACIG00000000304	kars	100	75.507	Amphilophus_citrinellus
ENSCPOG00000012036	KARS	96	80.594	ENSAOCG00000012971	kars	97	80.783	Amphiprion_ocellaris
ENSCPOG00000012036	KARS	98	80.034	ENSAPEG00000011144	kars	99	80.034	Amphiprion_percula
ENSCPOG00000012036	KARS	99	78.849	ENSATEG00000004954	kars	100	78.849	Anabas_testudineus
ENSCPOG00000012036	KARS	91	85.185	ENSAPLG00000012705	KARS	97	85.661	Anas_platyrhynchos
ENSCPOG00000012036	KARS	96	81.565	ENSACAG00000007577	KARS	90	81.565	Anolis_carolinensis
ENSCPOG00000012036	KARS	100	94.640	ENSANAG00000030403	-	100	94.640	Aotus_nancymaae
ENSCPOG00000012036	KARS	99	78.788	ENSANAG00000031739	-	99	78.559	Aotus_nancymaae
ENSCPOG00000012036	KARS	98	80.034	ENSACLG00000001613	kars	98	80.375	Astatotilapia_calliptera
ENSCPOG00000012036	KARS	99	79.557	ENSAMXG00000030719	kars	99	79.829	Astyanax_mexicanus
ENSCPOG00000012036	KARS	100	94.128	ENSBTAG00000015677	KARS	77	94.128	Bos_taurus
ENSCPOG00000012036	KARS	96	59.615	WBGene00002238	kars-1	99	62.868	Caenorhabditis_elegans
ENSCPOG00000012036	KARS	100	93.802	ENSCJAG00000014213	KARS	100	94.640	Callithrix_jacchus
ENSCPOG00000012036	KARS	100	91.840	ENSCAFG00000020069	KARS	100	92.800	Canis_familiaris
ENSCPOG00000012036	KARS	100	92.630	ENSCAFG00020001721	KARS	100	93.635	Canis_lupus_dingo
ENSCPOG00000012036	KARS	96	92.857	ENSCHIG00000016073	-	95	92.857	Capra_hircus
ENSCPOG00000012036	KARS	100	94.631	ENSCHIG00000014108	-	100	94.631	Capra_hircus
ENSCPOG00000012036	KARS	100	93.960	ENSTSYG00000001643	KARS	100	93.960	Carlito_syrichta
ENSCPOG00000012036	KARS	100	93.740	ENSCAPG00000016234	KARS	100	93.740	Cavia_aperea
ENSCPOG00000012036	KARS	100	94.137	ENSCCAG00000034307	-	100	95.142	Cebus_capucinus
ENSCPOG00000012036	KARS	92	77.514	ENSCCAG00000030337	-	100	77.982	Cebus_capucinus
ENSCPOG00000012036	KARS	99	93.592	ENSCATG00000038129	KARS	99	93.162	Cercocebus_atys
ENSCPOG00000012036	KARS	100	96.141	ENSCLAG00000007905	KARS	100	96.141	Chinchilla_lanigera
ENSCPOG00000012036	KARS	100	92.480	ENSCSAG00000003664	KARS	100	92.480	Chlorocebus_sabaeus
ENSCPOG00000012036	KARS	83	95.503	ENSCHOG00000013447	KARS	82	95.503	Choloepus_hoffmanni
ENSCPOG00000012036	KARS	98	85.542	ENSCPBG00000026969	KARS	99	84.576	Chrysemys_picta_bellii
ENSCPOG00000012036	KARS	88	72.937	ENSCPBG00000002553	-	95	72.937	Chrysemys_picta_bellii
ENSCPOG00000012036	KARS	96	67.832	ENSCING00000009513	-	98	68.000	Ciona_intestinalis
ENSCPOG00000012036	KARS	97	67.535	ENSCSAVG00000007684	-	98	68.412	Ciona_savignyi
ENSCPOG00000012036	KARS	54	70.533	ENSCSAVG00000001136	-	99	73.745	Ciona_savignyi
ENSCPOG00000012036	KARS	100	89.782	ENSCANG00000032813	KARS	100	89.782	Colobus_angolensis_palliatus
ENSCPOG00000012036	KARS	100	94.137	ENSCGRG00001004055	KARS	100	94.137	Cricetulus_griseus_chok1gshd
ENSCPOG00000012036	KARS	100	94.137	ENSCGRG00000014242	KARS	100	94.137	Cricetulus_griseus_crigri
ENSCPOG00000012036	KARS	97	81.109	ENSCSEG00000008324	kars	99	80.690	Cynoglossus_semilaevis
ENSCPOG00000012036	KARS	96	79.930	ENSCVAG00000019686	kars	99	79.930	Cyprinodon_variegatus
ENSCPOG00000012036	KARS	98	81.928	ENSDARG00000103799	kars	99	84.778	Danio_rerio
ENSCPOG00000012036	KARS	100	93.920	ENSDNOG00000002241	KARS	100	94.400	Dasypus_novemcinctus
ENSCPOG00000012036	KARS	100	72.315	ENSDORG00000024214	-	100	73.322	Dipodomys_ordii
ENSCPOG00000012036	KARS	100	95.302	ENSDORG00000004780	-	100	95.302	Dipodomys_ordii
ENSCPOG00000012036	KARS	96	69.284	FBgn0027084	LysRS	98	69.808	Drosophila_melanogaster
ENSCPOG00000012036	KARS	100	90.895	ENSETEG00000008353	KARS	100	90.895	Echinops_telfairi
ENSCPOG00000012036	KARS	97	71.084	ENSEBUG00000001284	-	98	71.084	Eptatretus_burgeri
ENSCPOG00000012036	KARS	100	96.154	ENSEASG00005013497	KARS	100	96.154	Equus_asinus_asinus
ENSCPOG00000012036	KARS	100	96.154	ENSECAG00000013424	KARS	100	96.154	Equus_caballus
ENSCPOG00000012036	KARS	97	86.513	ENSEEUG00000007042	KARS	100	85.256	Erinaceus_europaeus
ENSCPOG00000012036	KARS	99	71.066	ENSELUG00000014575	kars	97	72.902	Esox_lucius
ENSCPOG00000012036	KARS	98	95.026	ENSFCAG00000008573	KARS	100	95.142	Felis_catus
ENSCPOG00000012036	KARS	99	82.572	ENSFALG00000002543	KARS	98	82.572	Ficedula_albicollis
ENSCPOG00000012036	KARS	100	96.812	ENSFDAG00000007155	KARS	100	96.812	Fukomys_damarensis
ENSCPOG00000012036	KARS	98	79.210	ENSFHEG00000006172	kars	99	79.210	Fundulus_heteroclitus
ENSCPOG00000012036	KARS	96	78.125	ENSGMOG00000002633	kars	99	73.829	Gadus_morhua
ENSCPOG00000012036	KARS	98	84.509	ENSGALG00000000907	KARS	99	84.965	Gallus_gallus
ENSCPOG00000012036	KARS	98	80.137	ENSGAFG00000017252	kars	99	80.137	Gambusia_affinis
ENSCPOG00000012036	KARS	97	79.074	ENSGACG00000015749	kars	96	79.074	Gasterosteus_aculeatus
ENSCPOG00000012036	KARS	98	85.542	ENSGAGG00000023836	KARS	99	84.602	Gopherus_agassizii
ENSCPOG00000012036	KARS	90	71.028	ENSGAGG00000011960	-	98	71.348	Gopherus_agassizii
ENSCPOG00000012036	KARS	100	93.970	ENSGGOG00000005515	KARS	100	94.975	Gorilla_gorilla
ENSCPOG00000012036	KARS	98	80.034	ENSHBUG00000013619	kars	98	80.375	Haplochromis_burtoni
ENSCPOG00000012036	KARS	99	78.536	ENSHGLG00000001298	-	99	78.536	Heterocephalus_glaber_female
ENSCPOG00000012036	KARS	100	96.141	ENSHGLG00000011898	KARS	100	96.187	Heterocephalus_glaber_female
ENSCPOG00000012036	KARS	100	84.564	ENSHGLG00000015235	-	100	85.570	Heterocephalus_glaber_female
ENSCPOG00000012036	KARS	99	78.369	ENSHGLG00100006466	-	99	78.369	Heterocephalus_glaber_male
ENSCPOG00000012036	KARS	100	96.141	ENSHGLG00100012264	KARS	100	96.141	Heterocephalus_glaber_male
ENSCPOG00000012036	KARS	100	84.396	ENSHGLG00100012523	-	100	85.403	Heterocephalus_glaber_male
ENSCPOG00000012036	KARS	99	79.117	ENSHCOG00000002900	kars	97	79.117	Hippocampus_comes
ENSCPOG00000012036	KARS	98	79.658	ENSIPUG00000009862	kars	99	79.658	Ictalurus_punctatus
ENSCPOG00000012036	KARS	100	94.799	ENSSTOG00000004205	KARS	100	95.638	Ictidomys_tridecemlineatus
ENSCPOG00000012036	KARS	100	93.624	ENSJJAG00000020406	Kars	100	94.631	Jaculus_jaculus
ENSCPOG00000012036	KARS	96	81.359	ENSKMAG00000006434	kars	98	81.359	Kryptolebias_marmoratus
ENSCPOG00000012036	KARS	99	79.019	ENSLBEG00000026537	kars	96	79.019	Labrus_bergylta
ENSCPOG00000012036	KARS	97	83.045	ENSLACG00000006667	KARS	100	80.480	Latimeria_chalumnae
ENSCPOG00000012036	KARS	85	75.099	ENSLACG00000016399	-	99	75.099	Latimeria_chalumnae
ENSCPOG00000012036	KARS	88	70.722	ENSLOCG00000013608	-	95	70.722	Lepisosteus_oculatus
ENSCPOG00000012036	KARS	98	81.058	ENSLOCG00000004002	kars	99	81.058	Lepisosteus_oculatus
ENSCPOG00000012036	KARS	100	92.960	ENSLAFG00000015340	KARS	100	92.960	Loxodonta_africana
ENSCPOG00000012036	KARS	100	93.300	ENSMFAG00000040024	KARS	100	93.300	Macaca_fascicularis
ENSCPOG00000012036	KARS	100	93.300	ENSMNEG00000042879	-	100	93.300	Macaca_nemestrina
ENSCPOG00000012036	KARS	86	92.233	ENSMNEG00000035832	-	99	92.233	Macaca_nemestrina
ENSCPOG00000012036	KARS	100	93.467	ENSMLEG00000034947	KARS	100	93.467	Mandrillus_leucophaeus
ENSCPOG00000012036	KARS	96	80.454	ENSMAMG00000021559	kars	99	76.214	Mastacembelus_armatus
ENSCPOG00000012036	KARS	98	80.034	ENSMZEG00005014382	kars	98	80.375	Maylandia_zebra
ENSCPOG00000012036	KARS	95	83.865	ENSMGAG00000009000	KARS	100	83.865	Meleagris_gallopavo
ENSCPOG00000012036	KARS	100	94.472	ENSMICG00000011997	KARS	100	94.472	Microcebus_murinus
ENSCPOG00000012036	KARS	100	91.765	ENSMOCG00000019029	-	100	91.765	Microtus_ochrogaster
ENSCPOG00000012036	KARS	99	95.424	ENSMOCG00000011829	Kars	99	95.424	Microtus_ochrogaster
ENSCPOG00000012036	KARS	96	80.736	ENSMMOG00000016934	kars	100	80.736	Mola_mola
ENSCPOG00000012036	KARS	99	81.350	ENSMODG00000002238	-	99	81.350	Monodelphis_domestica
ENSCPOG00000012036	KARS	96	88.947	ENSMODG00000002215	-	99	89.123	Monodelphis_domestica
ENSCPOG00000012036	KARS	98	79.145	ENSMALG00000020858	kars	99	79.145	Monopterus_albus
ENSCPOG00000012036	KARS	86	88.660	MGP_CAROLIEiJ_G0031588	Kars	100	88.660	Mus_caroli
ENSCPOG00000012036	KARS	100	93.445	ENSMUSG00000031948	Kars	100	93.445	Mus_musculus
ENSCPOG00000012036	KARS	100	93.277	MGP_PahariEiJ_G0023186	Kars	100	93.277	Mus_pahari
ENSCPOG00000012036	KARS	100	93.445	MGP_SPRETEiJ_G0032706	Kars	100	93.445	Mus_spretus
ENSCPOG00000012036	KARS	100	92.320	ENSMPUG00000009871	KARS	100	93.120	Mustela_putorius_furo
ENSCPOG00000012036	KARS	100	94.305	ENSMLUG00000015119	-	100	94.305	Myotis_lucifugus
ENSCPOG00000012036	KARS	80	59.162	ENSMLUG00000026871	-	98	58.015	Myotis_lucifugus
ENSCPOG00000012036	KARS	100	94.790	ENSNGAG00000018820	-	100	94.790	Nannospalax_galili
ENSCPOG00000012036	KARS	95	95.027	ENSNGAG00000022944	-	96	95.027	Nannospalax_galili
ENSCPOG00000012036	KARS	98	79.863	ENSNBRG00000011098	kars	98	80.205	Neolamprologus_brichardi
ENSCPOG00000012036	KARS	100	93.970	ENSNLEG00000013072	KARS	100	94.975	Nomascus_leucogenys
ENSCPOG00000012036	KARS	98	84.364	ENSMEUG00000008684	KARS	99	83.117	Notamacropus_eugenii
ENSCPOG00000012036	KARS	97	93.761	ENSOPRG00000012544	KARS	99	93.257	Ochotona_princeps
ENSCPOG00000012036	KARS	100	94.631	ENSODEG00000013099	-	100	94.631	Octodon_degus
ENSCPOG00000012036	KARS	97	69.138	ENSODEG00000009464	-	100	69.138	Octodon_degus
ENSCPOG00000012036	KARS	98	80.205	ENSONIG00000005937	kars	99	80.546	Oreochromis_niloticus
ENSCPOG00000012036	KARS	99	86.993	ENSOANG00000008179	KARS	97	89.217	Ornithorhynchus_anatinus
ENSCPOG00000012036	KARS	100	86.745	ENSOCUG00000015553	KARS	100	87.416	Oryctolagus_cuniculus
ENSCPOG00000012036	KARS	95	81.947	ENSORLG00000007627	kars	99	78.053	Oryzias_latipes
ENSCPOG00000012036	KARS	95	81.416	ENSORLG00020010056	kars	99	77.888	Oryzias_latipes_hni
ENSCPOG00000012036	KARS	95	81.770	ENSORLG00015008179	kars	99	77.888	Oryzias_latipes_hsok
ENSCPOG00000012036	KARS	96	81.359	ENSOMEG00000001710	kars	98	81.359	Oryzias_melastigma
ENSCPOG00000012036	KARS	100	87.360	ENSOGAG00000005903	KARS	100	87.360	Otolemur_garnettii
ENSCPOG00000012036	KARS	92	94.900	ENSOARG00000006928	KARS	96	94.900	Ovis_aries
ENSCPOG00000012036	KARS	100	93.970	ENSPPAG00000036192	KARS	100	94.975	Pan_paniscus
ENSCPOG00000012036	KARS	100	93.802	ENSPPRG00000003027	KARS	100	94.807	Panthera_pardus
ENSCPOG00000012036	KARS	100	94.137	ENSPTIG00000008011	KARS	100	95.142	Panthera_tigris_altaica
ENSCPOG00000012036	KARS	100	94.137	ENSPTRG00000008364	KARS	100	95.142	Pan_troglodytes
ENSCPOG00000012036	KARS	100	93.635	ENSPANG00000024106	KARS	100	92.640	Papio_anubis
ENSCPOG00000012036	KARS	98	78.157	ENSPKIG00000009896	kars	99	80.103	Paramormyrops_kingsleyae
ENSCPOG00000012036	KARS	94	86.559	ENSPSIG00000009294	KARS	96	86.559	Pelodiscus_sinensis
ENSCPOG00000012036	KARS	89	73.019	ENSPSIG00000003041	-	97	73.019	Pelodiscus_sinensis
ENSCPOG00000012036	KARS	89	83.112	ENSPMGG00000006117	kars	100	80.351	Periophthalmus_magnuspinnatus
ENSCPOG00000012036	KARS	100	94.463	ENSPEMG00000012277	Kars	100	94.463	Peromyscus_maniculatus_bairdii
ENSCPOG00000012036	KARS	99	71.885	ENSPMAG00000008360	-	99	71.885	Petromyzon_marinus
ENSCPOG00000012036	KARS	97	91.207	ENSPCIG00000010761	-	97	91.207	Phascolarctos_cinereus
ENSCPOG00000012036	KARS	97	85.217	ENSPCIG00000025469	-	99	83.119	Phascolarctos_cinereus
ENSCPOG00000012036	KARS	95	80.423	ENSPFOG00000013253	kars	99	76.393	Poecilia_formosa
ENSCPOG00000012036	KARS	97	80.138	ENSPLAG00000004189	kars	99	80.138	Poecilia_latipinna
ENSCPOG00000012036	KARS	97	80.311	ENSPMEG00000015698	kars	99	80.311	Poecilia_mexicana
ENSCPOG00000012036	KARS	98	79.452	ENSPREG00000023179	kars	99	79.452	Poecilia_reticulata
ENSCPOG00000012036	KARS	100	92.960	ENSPPYG00000007567	KARS	100	93.920	Pongo_abelii
ENSCPOG00000012036	KARS	88	85.277	ENSPCAG00000010790	KARS	100	85.277	Procavia_capensis
ENSCPOG00000012036	KARS	100	84.640	ENSPCOG00000003166	KARS	100	84.640	Propithecus_coquereli
ENSCPOG00000012036	KARS	100	93.910	ENSPVAG00000006746	KARS	100	93.910	Pteropus_vampyrus
ENSCPOG00000012036	KARS	98	80.034	ENSPNYG00000013095	kars	98	80.375	Pundamilia_nyererei
ENSCPOG00000012036	KARS	98	81.026	ENSPNAG00000013828	kars	99	81.026	Pygocentrus_nattereri
ENSCPOG00000012036	KARS	100	91.853	ENSRNOG00000019456	Kars	100	92.652	Rattus_norvegicus
ENSCPOG00000012036	KARS	99	93.761	ENSRBIG00000030118	KARS	99	93.504	Rhinopithecus_bieti
ENSCPOG00000012036	KARS	100	92.800	ENSRROG00000041418	KARS	100	92.800	Rhinopithecus_roxellana
ENSCPOG00000012036	KARS	75	33.684	YNL073W	-	82	33.684	Saccharomyces_cerevisiae
ENSCPOG00000012036	KARS	95	56.217	YDR037W	KRS1	97	56.261	Saccharomyces_cerevisiae
ENSCPOG00000012036	KARS	100	94.137	ENSSBOG00000019255	KARS	100	95.142	Saimiri_boliviensis_boliviensis
ENSCPOG00000012036	KARS	99	72.990	ENSSHAG00000002050	-	99	72.990	Sarcophilus_harrisii
ENSCPOG00000012036	KARS	93	76.492	ENSSHAG00000009005	-	99	76.492	Sarcophilus_harrisii
ENSCPOG00000012036	KARS	97	82.931	ENSSHAG00000001359	-	99	83.103	Sarcophilus_harrisii
ENSCPOG00000012036	KARS	95	80.212	ENSSFOG00015014837	kars	100	80.212	Scleropages_formosus
ENSCPOG00000012036	KARS	99	79.695	ENSSMAG00000021441	kars	100	80.034	Scophthalmus_maximus
ENSCPOG00000012036	KARS	99	80.203	ENSSDUG00000001202	kars	100	80.203	Seriola_dumerili
ENSCPOG00000012036	KARS	96	80.594	ENSSLDG00000021220	kars	98	80.769	Seriola_lalandi_dorsalis
ENSCPOG00000012036	KARS	76	97.297	ENSSARG00000011493	KARS	79	97.297	Sorex_araneus
ENSCPOG00000012036	KARS	97	82.705	ENSSPUG00000004974	KARS	100	81.773	Sphenodon_punctatus
ENSCPOG00000012036	KARS	61	66.391	ENSSPUG00000000449	-	85	66.391	Sphenodon_punctatus
ENSCPOG00000012036	KARS	97	79.896	ENSSPAG00000020365	kars	97	80.000	Stegastes_partitus
ENSCPOG00000012036	KARS	100	93.970	ENSSSCG00000002704	KARS	100	94.975	Sus_scrofa
ENSCPOG00000012036	KARS	94	85.125	ENSTGUG00000008400	KARS	99	85.125	Taeniopygia_guttata
ENSCPOG00000012036	KARS	99	76.570	ENSTRUG00000017551	kars	99	75.570	Takifugu_rubripes
ENSCPOG00000012036	KARS	99	78.003	ENSTNIG00000009351	kars	100	78.173	Tetraodon_nigroviridis
ENSCPOG00000012036	KARS	97	73.958	ENSTBEG00000004610	KARS	100	73.958	Tupaia_belangeri
ENSCPOG00000012036	KARS	100	92.960	ENSTTRG00000001221	KARS	100	92.960	Tursiops_truncatus
ENSCPOG00000012036	KARS	100	92.462	ENSUAMG00000017557	KARS	100	93.467	Ursus_americanus
ENSCPOG00000012036	KARS	100	91.680	ENSUMAG00000014559	KARS	100	92.640	Ursus_maritimus
ENSCPOG00000012036	KARS	100	91.680	ENSVPAG00000003716	KARS	100	92.320	Vicugna_pacos
ENSCPOG00000012036	KARS	100	91.960	ENSVVUG00000024338	KARS	100	92.965	Vulpes_vulpes
ENSCPOG00000012036	KARS	99	78.342	ENSXETG00000003569	kars	100	78.342	Xenopus_tropicalis
ENSCPOG00000012036	KARS	95	80.247	ENSXCOG00000011313	kars	99	80.247	Xiphophorus_couchianus
ENSCPOG00000012036	KARS	98	79.966	ENSXMAG00000003191	kars	99	79.966	Xiphophorus_maculatus