EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000012182 (Gene tree)
Gene ID: 100720332
Gene Symbol: SYNJ1
Alias: INPP5G|PARK20
Full Name: synaptojanin 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 86587 bases
Position: chrDS562907.1:891300-977886
Accession: 100720332
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000010955	Exo_endo_phos	PF03372.23	1.7e-15	1	1
ENSCPOP00000029082	Exo_endo_phos	PF03372.23	2.2e-15	1	1
ENSCPOP00000030608	Exo_endo_phos	PF03372.23	2.2e-15	1	1
ENSCPOP00000021648	Exo_endo_phos	PF03372.23	2.4e-15	1	1
ENSCPOP00000010955	DUF1866	PF08952.11	5.2e-58	1	1
ENSCPOP00000029082	DUF1866	PF08952.11	5.6e-58	1	1
ENSCPOP00000030608	DUF1866	PF08952.11	5.6e-58	1	1
ENSCPOP00000021648	DUF1866	PF08952.11	6e-58	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000032301	SYNJ1-201	7065	XM_003467200	ENSCPOP00000021648	1607 (aa)	XP_003467248	A0A286X8A8
ENSCPOT00000012298	SYNJ1-202	4071	XM_003467202	ENSCPOP00000010955	1311 (aa)	XP_003467250	H0VKV1
ENSCPOT00000040591	SYNJ1-204	7080	XM_013149749	ENSCPOP00000029082	1521 (aa)	XP_013005203	A0A286XU69
ENSCPOT00000032423	SYNJ1-203	7119	-	ENSCPOP00000030608	1534 (aa)	-	A0A286XZ51

Gene Model

Click here to download ENSCPOG00000012182's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012182's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000012182	SYNJ1	85	51.904	ENSCPOG00000009144	SYNJ2	95	61.229

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000012182	SYNJ1	100	94.737	ENSG00000159082	SYNJ1	100	98.273	Homo_sapiens
ENSCPOG00000012182	SYNJ1	83	76.438	ENSAPOG00000002809	synj1	96	69.711	Acanthochromis_polyacanthus
ENSCPOG00000012182	SYNJ1	99	93.716	ENSAMEG00000015028	SYNJ1	100	90.149	Ailuropoda_melanoleuca
ENSCPOG00000012182	SYNJ1	100	63.503	ENSACIG00000008857	synj1	95	68.614	Amphilophus_citrinellus
ENSCPOG00000012182	SYNJ1	99	66.034	ENSAOCG00000009835	synj1	97	67.846	Amphiprion_ocellaris
ENSCPOG00000012182	SYNJ1	83	75.501	ENSAPEG00000021010	synj1	92	63.344	Amphiprion_percula
ENSCPOG00000012182	SYNJ1	100	67.459	ENSATEG00000002306	synj1	87	65.730	Anabas_testudineus
ENSCPOG00000012182	SYNJ1	100	84.709	ENSAPLG00000011832	SYNJ1	100	78.504	Anas_platyrhynchos
ENSCPOG00000012182	SYNJ1	100	83.650	ENSACAG00000003006	-	100	83.422	Anolis_carolinensis
ENSCPOG00000012182	SYNJ1	100	94.512	ENSANAG00000027325	SYNJ1	100	93.369	Aotus_nancymaae
ENSCPOG00000012182	SYNJ1	98	69.775	ENSACLG00000002255	synj1	98	69.335	Astatotilapia_calliptera
ENSCPOG00000012182	SYNJ1	99	60.566	ENSAMXG00000008208	synj1	95	62.970	Astyanax_mexicanus
ENSCPOG00000012182	SYNJ1	99	92.726	ENSBTAG00000003063	SYNJ1	100	92.494	Bos_taurus
ENSCPOG00000012182	SYNJ1	100	94.284	ENSCJAG00000009187	SYNJ1	100	93.140	Callithrix_jacchus
ENSCPOG00000012182	SYNJ1	99	93.410	ENSCAFG00000009041	SYNJ1	98	93.371	Canis_familiaris
ENSCPOG00000012182	SYNJ1	100	90.576	ENSCAFG00020025776	SYNJ1	100	90.576	Canis_lupus_dingo
ENSCPOG00000012182	SYNJ1	99	91.188	ENSCHIG00000005095	SYNJ1	100	88.620	Capra_hircus
ENSCPOG00000012182	SYNJ1	100	93.822	ENSTSYG00000014541	SYNJ1	100	92.677	Carlito_syrichta
ENSCPOG00000012182	SYNJ1	94	96.491	ENSCAPG00000014483	SYNJ1	99	96.491	Cavia_aperea
ENSCPOG00000012182	SYNJ1	100	94.284	ENSCCAG00000020825	SYNJ1	100	93.140	Cebus_capucinus
ENSCPOG00000012182	SYNJ1	100	94.737	ENSCATG00000033891	SYNJ1	100	93.593	Cercocebus_atys
ENSCPOG00000012182	SYNJ1	100	96.339	ENSCLAG00000009796	SYNJ1	100	98.990	Chinchilla_lanigera
ENSCPOG00000012182	SYNJ1	100	94.737	ENSCSAG00000009654	SYNJ1	100	94.737	Chlorocebus_sabaeus
ENSCPOG00000012182	SYNJ1	84	91.205	ENSCHOG00000012390	SYNJ1	87	91.205	Choloepus_hoffmanni
ENSCPOG00000012182	SYNJ1	94	88.126	ENSCPBG00000006402	SYNJ1	100	86.317	Chrysemys_picta_bellii
ENSCPOG00000012182	SYNJ1	100	94.737	ENSCANG00000031359	SYNJ1	100	93.593	Colobus_angolensis_palliatus
ENSCPOG00000012182	SYNJ1	100	93.059	ENSCGRG00001010861	Synj1	100	93.059	Cricetulus_griseus_chok1gshd
ENSCPOG00000012182	SYNJ1	100	93.059	ENSCGRG00000015749	Synj1	100	96.970	Cricetulus_griseus_crigri
ENSCPOG00000012182	SYNJ1	83	76.073	ENSCSEG00000019614	synj1	99	70.804	Cynoglossus_semilaevis
ENSCPOG00000012182	SYNJ1	83	74.041	ENSCVAG00000019250	synj1	95	69.002	Cyprinodon_variegatus
ENSCPOG00000012182	SYNJ1	84	76.688	ENSDARG00000025011	synj1	98	71.275	Danio_rerio
ENSCPOG00000012182	SYNJ1	98	89.294	ENSDNOG00000010732	SYNJ1	99	85.057	Dasypus_novemcinctus
ENSCPOG00000012182	SYNJ1	53	96.576	ENSDORG00000014735	-	100	97.980	Dipodomys_ordii
ENSCPOG00000012182	SYNJ1	86	95.652	ENSETEG00000018674	SYNJ1	78	95.652	Echinops_telfairi
ENSCPOG00000012182	SYNJ1	99	92.284	ENSEASG00005006287	SYNJ1	98	94.864	Equus_asinus_asinus
ENSCPOG00000012182	SYNJ1	99	93.511	ENSECAG00000004829	SYNJ1	98	94.251	Equus_caballus
ENSCPOG00000012182	SYNJ1	91	88.931	ENSEEUG00000005150	SYNJ1	95	88.931	Erinaceus_europaeus
ENSCPOG00000012182	SYNJ1	99	65.125	ENSELUG00000009731	synj1	95	64.531	Esox_lucius
ENSCPOG00000012182	SYNJ1	99	92.901	ENSFCAG00000012498	SYNJ1	100	91.781	Felis_catus
ENSCPOG00000012182	SYNJ1	74	77.755	ENSFALG00000004680	SYNJ1	100	68.855	Ficedula_albicollis
ENSCPOG00000012182	SYNJ1	100	95.728	ENSFDAG00000016818	SYNJ1	100	98.268	Fukomys_damarensis
ENSCPOG00000012182	SYNJ1	83	75.450	ENSFHEG00000017689	synj1	96	61.746	Fundulus_heteroclitus
ENSCPOG00000012182	SYNJ1	76	72.790	ENSGMOG00000014852	synj1	77	72.424	Gadus_morhua
ENSCPOG00000012182	SYNJ1	100	82.572	ENSGALG00000034317	SYNJ1	100	78.590	Gallus_gallus
ENSCPOG00000012182	SYNJ1	83	74.547	ENSGAFG00000019466	synj1	96	62.197	Gambusia_affinis
ENSCPOG00000012182	SYNJ1	99	62.537	ENSGACG00000020575	synj1	90	68.305	Gasterosteus_aculeatus
ENSCPOG00000012182	SYNJ1	100	85.950	ENSGAGG00000022523	SYNJ1	100	85.886	Gopherus_agassizii
ENSCPOG00000012182	SYNJ1	100	94.355	ENSGGOG00000015945	SYNJ1	100	93.211	Gorilla_gorilla
ENSCPOG00000012182	SYNJ1	98	69.775	ENSHBUG00000007774	synj1	98	69.335	Haplochromis_burtoni
ENSCPOG00000012182	SYNJ1	100	95.423	ENSHGLG00000006420	SYNJ1	100	98.268	Heterocephalus_glaber_female
ENSCPOG00000012182	SYNJ1	99	95.402	ENSHGLG00100012591	SYNJ1	100	98.268	Heterocephalus_glaber_male
ENSCPOG00000012182	SYNJ1	99	63.844	ENSHCOG00000012774	synj1	95	67.069	Hippocampus_comes
ENSCPOG00000012182	SYNJ1	99	69.755	ENSIPUG00000010691	SYNJ1	95	63.529	Ictalurus_punctatus
ENSCPOG00000012182	SYNJ1	100	95.423	ENSSTOG00000015806	SYNJ1	100	95.423	Ictidomys_tridecemlineatus
ENSCPOG00000012182	SYNJ1	99	88.006	ENSJJAG00000020168	Synj1	100	84.747	Jaculus_jaculus
ENSCPOG00000012182	SYNJ1	83	75.432	ENSKMAG00000004221	synj1	87	77.646	Kryptolebias_marmoratus
ENSCPOG00000012182	SYNJ1	82	74.503	ENSLBEG00000015081	synj1	97	65.033	Labrus_bergylta
ENSCPOG00000012182	SYNJ1	100	76.888	ENSLACG00000005928	SYNJ1	100	68.464	Latimeria_chalumnae
ENSCPOG00000012182	SYNJ1	100	77.249	ENSLOCG00000009230	synj1	100	70.534	Lepisosteus_oculatus
ENSCPOG00000012182	SYNJ1	99	93.333	ENSLAFG00000011806	SYNJ1	99	88.038	Loxodonta_africana
ENSCPOG00000012182	SYNJ1	98	93.833	ENSMFAG00000018883	SYNJ1	99	94.493	Macaca_fascicularis
ENSCPOG00000012182	SYNJ1	100	94.444	ENSMMUG00000004624	SYNJ1	100	94.444	Macaca_mulatta
ENSCPOG00000012182	SYNJ1	100	94.661	ENSMNEG00000040077	SYNJ1	100	90.969	Macaca_nemestrina
ENSCPOG00000012182	SYNJ1	100	94.737	ENSMLEG00000037029	SYNJ1	100	93.593	Mandrillus_leucophaeus
ENSCPOG00000012182	SYNJ1	99	66.397	ENSMAMG00000013404	synj1	88	65.173	Mastacembelus_armatus
ENSCPOG00000012182	SYNJ1	83	75.410	ENSMZEG00005024358	synj1	98	69.794	Maylandia_zebra
ENSCPOG00000012182	SYNJ1	100	84.215	ENSMGAG00000014522	SYNJ1	100	77.952	Meleagris_gallopavo
ENSCPOG00000012182	SYNJ1	100	92.906	ENSMAUG00000009743	Synj1	100	96.681	Mesocricetus_auratus
ENSCPOG00000012182	SYNJ1	100	94.050	ENSMICG00000034953	SYNJ1	100	92.906	Microcebus_murinus
ENSCPOG00000012182	SYNJ1	88	72.797	ENSMMOG00000010203	synj1	96	67.749	Mola_mola
ENSCPOG00000012182	SYNJ1	99	80.890	ENSMODG00000021073	SYNJ1	100	80.577	Monodelphis_domestica
ENSCPOG00000012182	SYNJ1	99	65.287	ENSMALG00000014015	synj1	92	64.057	Monopterus_albus
ENSCPOG00000012182	SYNJ1	100	93.064	MGP_CAROLIEiJ_G0020951	Synj1	100	97.403	Mus_caroli
ENSCPOG00000012182	SYNJ1	100	93.216	ENSMUSG00000022973	Synj1	100	97.835	Mus_musculus
ENSCPOG00000012182	SYNJ1	100	93.369	MGP_PahariEiJ_G0016656	Synj1	100	97.835	Mus_pahari
ENSCPOG00000012182	SYNJ1	100	93.216	MGP_SPRETEiJ_G0021857	Synj1	100	97.835	Mus_spretus
ENSCPOG00000012182	SYNJ1	99	93.369	ENSMPUG00000001153	SYNJ1	100	89.886	Mustela_putorius_furo
ENSCPOG00000012182	SYNJ1	62	83.354	ENSMLUG00000005764	-	100	75.116	Myotis_lucifugus
ENSCPOG00000012182	SYNJ1	51	95.111	ENSMLUG00000026584	-	100	95.111	Myotis_lucifugus
ENSCPOG00000012182	SYNJ1	100	93.669	ENSNGAG00000000453	Synj1	100	97.691	Nannospalax_galili
ENSCPOG00000012182	SYNJ1	83	71.611	ENSNBRG00000011936	synj1	90	64.569	Neolamprologus_brichardi
ENSCPOG00000012182	SYNJ1	90	89.740	ENSNLEG00000003734	SYNJ1	100	89.740	Nomascus_leucogenys
ENSCPOG00000012182	SYNJ1	88	76.761	ENSMEUG00000004158	-	73	76.229	Notamacropus_eugenii
ENSCPOG00000012182	SYNJ1	93	91.738	ENSOPRG00000013602	SYNJ1	93	93.049	Ochotona_princeps
ENSCPOG00000012182	SYNJ1	53	97.004	ENSODEG00000002409	-	100	98.557	Octodon_degus
ENSCPOG00000012182	SYNJ1	99	69.341	ENSONIG00000004667	synj1	100	67.015	Oreochromis_niloticus
ENSCPOG00000012182	SYNJ1	97	85.559	ENSOANG00000006929	SYNJ1	98	77.049	Ornithorhynchus_anatinus
ENSCPOG00000012182	SYNJ1	99	90.513	ENSOCUG00000001420	SYNJ1	100	87.365	Oryctolagus_cuniculus
ENSCPOG00000012182	SYNJ1	83	75.455	ENSORLG00000004320	synj1	96	67.170	Oryzias_latipes
ENSCPOG00000012182	SYNJ1	83	73.617	ENSORLG00020011994	synj1	96	67.874	Oryzias_latipes_hni
ENSCPOG00000012182	SYNJ1	85	75.159	ENSORLG00015018077	synj1	93	61.824	Oryzias_latipes_hsok
ENSCPOG00000012182	SYNJ1	83	74.977	ENSOMEG00000014322	synj1	97	66.717	Oryzias_melastigma
ENSCPOG00000012182	SYNJ1	100	89.530	ENSOGAG00000006010	SYNJ1	100	86.630	Otolemur_garnettii
ENSCPOG00000012182	SYNJ1	99	92.302	ENSOARG00000013414	SYNJ1	100	86.962	Ovis_aries
ENSCPOG00000012182	SYNJ1	100	94.813	ENSPPAG00000026784	SYNJ1	100	93.669	Pan_paniscus
ENSCPOG00000012182	SYNJ1	99	93.827	ENSPPRG00000023469	SYNJ1	100	91.781	Panthera_pardus
ENSCPOG00000012182	SYNJ1	99	93.827	ENSPTIG00000007930	SYNJ1	100	91.705	Panthera_tigris_altaica
ENSCPOG00000012182	SYNJ1	100	91.230	ENSPTRG00000048135	-	98	94.980	Pan_troglodytes
ENSCPOG00000012182	SYNJ1	100	94.813	ENSPTRG00000023787	SYNJ1	100	93.669	Pan_troglodytes
ENSCPOG00000012182	SYNJ1	100	94.737	ENSPANG00000022531	SYNJ1	100	94.737	Papio_anubis
ENSCPOG00000012182	SYNJ1	88	77.577	ENSPKIG00000022603	synj1	95	76.831	Paramormyrops_kingsleyae
ENSCPOG00000012182	SYNJ1	83	75.568	ENSPMGG00000016831	synj1	97	59.962	Periophthalmus_magnuspinnatus
ENSCPOG00000012182	SYNJ1	100	93.211	ENSPEMG00000018767	Synj1	100	97.114	Peromyscus_maniculatus_bairdii
ENSCPOG00000012182	SYNJ1	78	61.234	ENSPMAG00000002887	synj1	96	53.787	Petromyzon_marinus
ENSCPOG00000012182	SYNJ1	99	86.860	ENSPCIG00000016372	SYNJ1	100	86.742	Phascolarctos_cinereus
ENSCPOG00000012182	SYNJ1	83	76.091	ENSPFOG00000016886	synj1	96	69.356	Poecilia_formosa
ENSCPOG00000012182	SYNJ1	99	64.891	ENSPLAG00000017559	synj1	96	69.609	Poecilia_latipinna
ENSCPOG00000012182	SYNJ1	99	65.449	ENSPMEG00000007643	synj1	97	58.185	Poecilia_mexicana
ENSCPOG00000012182	SYNJ1	100	66.569	ENSPREG00000012412	synj1	96	69.344	Poecilia_reticulata
ENSCPOG00000012182	SYNJ1	99	93.974	ENSPPYG00000011365	SYNJ1	98	93.159	Pongo_abelii
ENSCPOG00000012182	SYNJ1	89	92.857	ENSPCAG00000009906	SYNJ1	89	92.857	Procavia_capensis
ENSCPOG00000012182	SYNJ1	93	91.667	ENSPCOG00000024841	SYNJ1	99	90.293	Propithecus_coquereli
ENSCPOG00000012182	SYNJ1	99	88.659	ENSPVAG00000000892	SYNJ1	100	84.889	Pteropus_vampyrus
ENSCPOG00000012182	SYNJ1	83	74.249	ENSPNYG00000022989	synj1	97	68.591	Pundamilia_nyererei
ENSCPOG00000012182	SYNJ1	84	76.195	ENSPNAG00000021119	synj1	91	76.492	Pygocentrus_nattereri
ENSCPOG00000012182	SYNJ1	100	93.364	ENSRNOG00000002051	Synj1	100	93.151	Rattus_norvegicus
ENSCPOG00000012182	SYNJ1	100	94.584	ENSRBIG00000034477	SYNJ1	100	93.440	Rhinopithecus_bieti
ENSCPOG00000012182	SYNJ1	100	94.737	ENSRROG00000039256	SYNJ1	100	93.593	Rhinopithecus_roxellana
ENSCPOG00000012182	SYNJ1	100	94.360	ENSSBOG00000021001	SYNJ1	100	93.216	Saimiri_boliviensis_boliviensis
ENSCPOG00000012182	SYNJ1	99	84.621	ENSSHAG00000008538	SYNJ1	99	77.197	Sarcophilus_harrisii
ENSCPOG00000012182	SYNJ1	100	70.365	ENSSFOG00015006095	synj1	95	65.081	Scleropages_formosus
ENSCPOG00000012182	SYNJ1	99	65.520	ENSSMAG00000018066	synj1	95	68.760	Scophthalmus_maximus
ENSCPOG00000012182	SYNJ1	83	75.658	ENSSDUG00000013058	synj1	98	59.468	Seriola_dumerili
ENSCPOG00000012182	SYNJ1	100	66.010	ENSSLDG00000021406	synj1	96	70.730	Seriola_lalandi_dorsalis
ENSCPOG00000012182	SYNJ1	69	96.805	ENSSARG00000009490	SYNJ1	75	96.805	Sorex_araneus
ENSCPOG00000012182	SYNJ1	100	79.909	ENSSPUG00000012552	SYNJ1	100	78.442	Sphenodon_punctatus
ENSCPOG00000012182	SYNJ1	83	75.501	ENSSPAG00000017029	synj1	95	69.336	Stegastes_partitus
ENSCPOG00000012182	SYNJ1	78	74.829	ENSSPAG00000006812	SYNJ1	87	64.240	Stegastes_partitus
ENSCPOG00000012182	SYNJ1	100	92.343	ENSSSCG00000012035	SYNJ1	100	92.343	Sus_scrofa
ENSCPOG00000012182	SYNJ1	100	83.561	ENSTGUG00000013445	SYNJ1	100	75.739	Taeniopygia_guttata
ENSCPOG00000012182	SYNJ1	88	72.103	ENSTRUG00000006907	synj1	94	68.314	Takifugu_rubripes
ENSCPOG00000012182	SYNJ1	99	67.825	ENSTNIG00000009940	synj1	100	65.449	Tetraodon_nigroviridis
ENSCPOG00000012182	SYNJ1	89	96.407	ENSTBEG00000016298	SYNJ1	89	96.407	Tupaia_belangeri
ENSCPOG00000012182	SYNJ1	99	84.215	ENSTTRG00000002222	SYNJ1	100	79.175	Tursiops_truncatus
ENSCPOG00000012182	SYNJ1	100	90.386	ENSUAMG00000018606	SYNJ1	99	96.967	Ursus_americanus
ENSCPOG00000012182	SYNJ1	98	94.580	ENSUMAG00000018419	SYNJ1	99	96.967	Ursus_maritimus
ENSCPOG00000012182	SYNJ1	87	97.143	ENSVPAG00000001241	SYNJ1	87	97.418	Vicugna_pacos
ENSCPOG00000012182	SYNJ1	100	94.127	ENSVVUG00000023125	SYNJ1	100	94.127	Vulpes_vulpes
ENSCPOG00000012182	SYNJ1	100	76.889	ENSXETG00000009899	synj1	98	68.474	Xenopus_tropicalis
ENSCPOG00000012182	SYNJ1	83	75.978	ENSXCOG00000011896	synj1	98	67.299	Xiphophorus_couchianus
ENSCPOG00000012182	SYNJ1	99	64.219	ENSXMAG00000017524	synj1	96	70.656	Xiphophorus_maculatus