EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000012314 (Gene tree)
Gene ID: 100721957
Gene Symbol: RALYL
Alias: HNRPCL3
Full Name: RALY RNA binding protein like
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 394643 bases
Position: chrDS562855.1:29607020-30001662
Accession: 100721957
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000011077	RRM_1	PF00076.22	2.7e-11	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012431	RALYL-204	879	-	ENSCPOP00000011077	292 (aa)	-	H0VL57
ENSCPOT00000047203	RALYL-203	444	-	ENSCPOP00000030508	147 (aa)	-	A0A286XYU7
ENSCPOT00000033218	RALYL-201	1266	XM_013143809	ENSCPOP00000027833	219 (aa)	XP_012999263	A0A286XQN2
ENSCPOT00000047320	RALYL-202	492	-	ENSCPOP00000021754	163 (aa)	-	A0A286X8L1

Gene Model

Click here to download ENSCPOG00000012314's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012314's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000012314	RALYL	80	63.983	ENSCPOG00000000309	RALY	99	59.916
ENSCPOG00000012314	RALYL	88	54.682	ENSCPOG00000001474	HNRNPC	93	51.852

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000012314	RALYL	100	95.548	ENSG00000184672	RALYL	100	100.000	Homo_sapiens
ENSCPOG00000012314	RALYL	77	52.966	ENSAPOG00000006963	hnrnpc	70	52.586	Acanthochromis_polyacanthus
ENSCPOG00000012314	RALYL	83	51.429	ENSACIG00000016568	-	97	48.708	Amphilophus_citrinellus
ENSCPOG00000012314	RALYL	74	55.844	ENSACIG00000000270	-	95	47.157	Amphilophus_citrinellus
ENSCPOG00000012314	RALYL	78	53.648	ENSAOCG00000021616	-	70	55.605	Amphiprion_ocellaris
ENSCPOG00000012314	RALYL	77	52.966	ENSAOCG00000003896	-	70	53.043	Amphiprion_ocellaris
ENSCPOG00000012314	RALYL	82	52.066	ENSAPEG00000019962	-	78	52.049	Amphiprion_percula
ENSCPOG00000012314	RALYL	77	52.966	ENSAPEG00000001489	-	70	53.043	Amphiprion_percula
ENSCPOG00000012314	RALYL	78	54.506	ENSATEG00000011734	-	95	47.315	Anabas_testudineus
ENSCPOG00000012314	RALYL	74	56.561	ENSATEG00000018006	-	99	47.719	Anabas_testudineus
ENSCPOG00000012314	RALYL	98	91.379	ENSAPLG00000015574	RALYL	100	91.034	Anas_platyrhynchos
ENSCPOG00000012314	RALYL	100	90.444	ENSACAG00000028464	RALYL	100	90.444	Anolis_carolinensis
ENSCPOG00000012314	RALYL	100	95.890	ENSANAG00000023383	RALYL	96	94.178	Aotus_nancymaae
ENSCPOG00000012314	RALYL	74	54.348	ENSACLG00000013636	-	88	48.227	Astatotilapia_calliptera
ENSCPOG00000012314	RALYL	75	56.000	ENSACLG00000000995	-	79	54.222	Astatotilapia_calliptera
ENSCPOG00000012314	RALYL	81	52.917	ENSACLG00000005707	-	93	48.123	Astatotilapia_calliptera
ENSCPOG00000012314	RALYL	69	48.293	ENSAMXG00000042946	hnrnpc	94	49.495	Astyanax_mexicanus
ENSCPOG00000012314	RALYL	79	52.282	ENSAMXG00000034915	zgc:55733	96	47.535	Astyanax_mexicanus
ENSCPOG00000012314	RALYL	100	95.890	ENSCJAG00000000402	RALYL	96	93.836	Callithrix_jacchus
ENSCPOG00000012314	RALYL	100	96.233	ENSCCAG00000025003	RALYL	96	94.521	Cebus_capucinus
ENSCPOG00000012314	RALYL	100	95.548	ENSCATG00000042145	RALYL	96	93.836	Cercocebus_atys
ENSCPOG00000012314	RALYL	100	99.315	ENSCLAG00000005228	RALYL	100	99.315	Chinchilla_lanigera
ENSCPOG00000012314	RALYL	78	89.565	ENSCHOG00000013228	RALYL	78	89.565	Choloepus_hoffmanni
ENSCPOG00000012314	RALYL	100	95.205	ENSCANG00000039144	RALYL	96	93.493	Colobus_angolensis_palliatus
ENSCPOG00000012314	RALYL	100	97.270	ENSCGRG00001009241	Ralyl	100	97.270	Cricetulus_griseus_chok1gshd
ENSCPOG00000012314	RALYL	75	55.157	ENSCSEG00000021349	-	89	48.475	Cynoglossus_semilaevis
ENSCPOG00000012314	RALYL	74	51.786	ENSCSEG00000019769	-	71	51.092	Cynoglossus_semilaevis
ENSCPOG00000012314	RALYL	74	54.911	ENSCVAG00000016981	-	65	54.955	Cyprinodon_variegatus
ENSCPOG00000012314	RALYL	95	44.876	ENSCVAG00000002797	-	97	44.590	Cyprinodon_variegatus
ENSCPOG00000012314	RALYL	81	52.697	ENSDARG00000103845	zgc:55733	96	46.875	Danio_rerio
ENSCPOG00000012314	RALYL	79	52.941	ENSDARG00000053810	hnrnpc	86	47.719	Danio_rerio
ENSCPOG00000012314	RALYL	100	97.611	ENSDORG00000003721	Ralyl	100	97.611	Dipodomys_ordii
ENSCPOG00000012314	RALYL	65	96.354	ENSETEG00000014028	RALYL	100	96.354	Echinops_telfairi
ENSCPOG00000012314	RALYL	96	42.761	ENSEBUG00000012363	hnrnpc	84	41.801	Eptatretus_burgeri
ENSCPOG00000012314	RALYL	99	44.138	ENSEBUG00000006049	RALYL	98	47.099	Eptatretus_burgeri
ENSCPOG00000012314	RALYL	98	94.097	ENSEEUG00000007202	RALYL	100	94.444	Erinaceus_europaeus
ENSCPOG00000012314	RALYL	81	51.852	ENSELUG00000007714	-	96	45.993	Esox_lucius
ENSCPOG00000012314	RALYL	79	54.430	ENSELUG00000004132	-	94	48.611	Esox_lucius
ENSCPOG00000012314	RALYL	98	90.000	ENSFALG00000008647	RALYL	100	89.655	Ficedula_albicollis
ENSCPOG00000012314	RALYL	93	48.214	ENSFHEG00000003605	-	87	46.809	Fundulus_heteroclitus
ENSCPOG00000012314	RALYL	74	51.883	ENSFHEG00000007278	-	69	51.899	Fundulus_heteroclitus
ENSCPOG00000012314	RALYL	100	89.153	ENSGALG00000036938	RALYL	100	90.169	Gallus_gallus
ENSCPOG00000012314	RALYL	75	55.204	ENSGAFG00000020992	-	91	47.959	Gambusia_affinis
ENSCPOG00000012314	RALYL	74	55.405	ENSGAFG00000020486	-	86	46.429	Gambusia_affinis
ENSCPOG00000012314	RALYL	74	46.610	ENSGACG00000018932	-	83	48.472	Gasterosteus_aculeatus
ENSCPOG00000012314	RALYL	74	54.425	ENSGACG00000017772	-	81	54.911	Gasterosteus_aculeatus
ENSCPOG00000012314	RALYL	100	95.548	ENSGGOG00000000841	RALYL	96	93.836	Gorilla_gorilla
ENSCPOG00000012314	RALYL	74	54.783	ENSHBUG00000018342	-	95	43.168	Haplochromis_burtoni
ENSCPOG00000012314	RALYL	79	54.274	ENSHBUG00000010527	-	85	48.621	Haplochromis_burtoni
ENSCPOG00000012314	RALYL	100	98.288	ENSHGLG00000004866	RALYL	100	98.288	Heterocephalus_glaber_female
ENSCPOG00000012314	RALYL	100	98.288	ENSHGLG00100017480	RALYL	100	98.288	Heterocephalus_glaber_male
ENSCPOG00000012314	RALYL	79	52.245	ENSHCOG00000012333	hnrnpc	76	51.210	Hippocampus_comes
ENSCPOG00000012314	RALYL	82	53.306	ENSIPUG00000008666	zgc:55733	99	51.587	Ictalurus_punctatus
ENSCPOG00000012314	RALYL	75	55.605	ENSIPUG00000011271	hnrnpc	94	55.856	Ictalurus_punctatus
ENSCPOG00000012314	RALYL	98	98.611	ENSSTOG00000012583	RALYL	100	98.611	Ictidomys_tridecemlineatus
ENSCPOG00000012314	RALYL	74	55.856	ENSKMAG00000018265	-	81	48.763	Kryptolebias_marmoratus
ENSCPOG00000012314	RALYL	94	48.601	ENSKMAG00000011170	-	98	46.622	Kryptolebias_marmoratus
ENSCPOG00000012314	RALYL	77	51.261	ENSLBEG00000024418	-	86	47.761	Labrus_bergylta
ENSCPOG00000012314	RALYL	77	53.247	ENSLBEG00000006979	-	86	48.881	Labrus_bergylta
ENSCPOG00000012314	RALYL	74	55.856	ENSLBEG00000006193	-	84	48.780	Labrus_bergylta
ENSCPOG00000012314	RALYL	76	51.092	ENSLOCG00000002560	hnrnpc	73	52.000	Lepisosteus_oculatus
ENSCPOG00000012314	RALYL	100	95.548	ENSMNEG00000033288	RALYL	96	93.836	Macaca_nemestrina
ENSCPOG00000012314	RALYL	100	95.548	ENSMLEG00000038284	RALYL	96	93.836	Mandrillus_leucophaeus
ENSCPOG00000012314	RALYL	77	55.983	ENSMAMG00000012236	-	94	47.931	Mastacembelus_armatus
ENSCPOG00000012314	RALYL	75	56.054	ENSMAMG00000008033	-	73	56.502	Mastacembelus_armatus
ENSCPOG00000012314	RALYL	81	52.917	ENSMZEG00005024249	-	87	47.782	Maylandia_zebra
ENSCPOG00000012314	RALYL	75	54.425	ENSMZEG00005020460	-	77	53.043	Maylandia_zebra
ENSCPOG00000012314	RALYL	100	97.270	ENSMAUG00000015149	Ralyl	100	97.270	Mesocricetus_auratus
ENSCPOG00000012314	RALYL	100	96.918	ENSMICG00000005558	RALYL	96	96.918	Microcebus_murinus
ENSCPOG00000012314	RALYL	100	94.198	ENSMOCG00000017371	Ralyl	100	94.198	Microtus_ochrogaster
ENSCPOG00000012314	RALYL	79	52.459	ENSMMOG00000021465	-	95	48.980	Mola_mola
ENSCPOG00000012314	RALYL	81	51.037	ENSMMOG00000019520	-	98	50.545	Mola_mola
ENSCPOG00000012314	RALYL	74	51.598	ENSMALG00000007520	-	95	47.902	Monopterus_albus
ENSCPOG00000012314	RALYL	79	55.745	ENSMALG00000014623	-	82	50.000	Monopterus_albus
ENSCPOG00000012314	RALYL	100	95.222	ENSMUSG00000039717	Ralyl	100	97.647	Mus_musculus
ENSCPOG00000012314	RALYL	100	97.611	ENSMPUG00000010724	RALYL	100	97.611	Mustela_putorius_furo
ENSCPOG00000012314	RALYL	100	94.539	ENSNGAG00000013375	Ralyl	100	94.539	Nannospalax_galili
ENSCPOG00000012314	RALYL	79	54.274	ENSNBRG00000015676	-	84	49.129	Neolamprologus_brichardi
ENSCPOG00000012314	RALYL	78	56.838	ENSNBRG00000004912	-	94	54.077	Neolamprologus_brichardi
ENSCPOG00000012314	RALYL	100	91.438	ENSNLEG00000002702	RALYL	96	89.726	Nomascus_leucogenys
ENSCPOG00000012314	RALYL	65	87.958	ENSOPRG00000013650	-	100	87.958	Ochotona_princeps
ENSCPOG00000012314	RALYL	100	97.603	ENSODEG00000001012	RALYL	100	97.603	Octodon_degus
ENSCPOG00000012314	RALYL	79	54.274	ENSONIG00000018350	-	69	54.978	Oreochromis_niloticus
ENSCPOG00000012314	RALYL	77	54.701	ENSONIG00000007859	-	78	54.237	Oreochromis_niloticus
ENSCPOG00000012314	RALYL	78	49.787	ENSORLG00000009999	-	72	48.536	Oryzias_latipes
ENSCPOG00000012314	RALYL	74	54.386	ENSORLG00000003144	-	83	48.136	Oryzias_latipes
ENSCPOG00000012314	RALYL	78	49.787	ENSORLG00020018228	hnrnpc	72	48.536	Oryzias_latipes_hni
ENSCPOG00000012314	RALYL	78	49.787	ENSORLG00015019755	-	72	48.536	Oryzias_latipes_hsok
ENSCPOG00000012314	RALYL	74	54.386	ENSORLG00015009460	-	82	48.136	Oryzias_latipes_hsok
ENSCPOG00000012314	RALYL	78	50.638	ENSOMEG00000020488	-	72	49.372	Oryzias_melastigma
ENSCPOG00000012314	RALYL	74	56.109	ENSOMEG00000022665	-	83	49.306	Oryzias_melastigma
ENSCPOG00000012314	RALYL	100	95.548	ENSPPAG00000038705	RALYL	98	93.836	Pan_paniscus
ENSCPOG00000012314	RALYL	100	97.952	ENSPPRG00000018612	RALYL	96	97.952	Panthera_pardus
ENSCPOG00000012314	RALYL	100	97.611	ENSPTIG00000020331	RALYL	96	97.611	Panthera_tigris_altaica
ENSCPOG00000012314	RALYL	100	95.548	ENSPTRG00000020381	RALYL	96	93.836	Pan_troglodytes
ENSCPOG00000012314	RALYL	100	95.548	ENSPANG00000029305	RALYL	96	93.836	Papio_anubis
ENSCPOG00000012314	RALYL	79	52.227	ENSPKIG00000008592	-	95	45.570	Paramormyrops_kingsleyae
ENSCPOG00000012314	RALYL	80	55.230	ENSPKIG00000022837	-	85	50.890	Paramormyrops_kingsleyae
ENSCPOG00000012314	RALYL	100	89.492	ENSPSIG00000011135	RALYL	100	89.492	Pelodiscus_sinensis
ENSCPOG00000012314	RALYL	75	55.702	ENSPMGG00000017774	-	93	46.316	Periophthalmus_magnuspinnatus
ENSCPOG00000012314	RALYL	74	55.605	ENSPMGG00000013144	-	97	49.077	Periophthalmus_magnuspinnatus
ENSCPOG00000012314	RALYL	100	96.928	ENSPEMG00000016447	Ralyl	100	96.928	Peromyscus_maniculatus_bairdii
ENSCPOG00000012314	RALYL	77	68.398	ENSPMAG00000002407	RALYL	100	66.957	Petromyzon_marinus
ENSCPOG00000012314	RALYL	74	55.455	ENSPFOG00000002643	-	65	55.405	Poecilia_formosa
ENSCPOG00000012314	RALYL	74	55.357	ENSPFOG00000001583	-	87	47.518	Poecilia_formosa
ENSCPOG00000012314	RALYL	74	54.018	ENSPLAG00000015305	-	87	46.099	Poecilia_latipinna
ENSCPOG00000012314	RALYL	74	55.455	ENSPLAG00000000061	-	65	55.405	Poecilia_latipinna
ENSCPOG00000012314	RALYL	74	55.455	ENSPMEG00000016524	-	65	55.405	Poecilia_mexicana
ENSCPOG00000012314	RALYL	74	54.911	ENSPMEG00000004802	-	87	46.454	Poecilia_mexicana
ENSCPOG00000012314	RALYL	74	55.856	ENSPREG00000007928	-	91	46.780	Poecilia_reticulata
ENSCPOG00000012314	RALYL	74	55.505	ENSPREG00000001852	-	89	47.552	Poecilia_reticulata
ENSCPOG00000012314	RALYL	75	99.174	ENSPPYG00000018710	-	99	99.174	Pongo_abelii
ENSCPOG00000012314	RALYL	100	88.356	ENSPVAG00000010821	RALYL	99	88.356	Pteropus_vampyrus
ENSCPOG00000012314	RALYL	75	58.590	ENSPNYG00000020293	-	85	55.310	Pundamilia_nyererei
ENSCPOG00000012314	RALYL	79	54.274	ENSPNYG00000003747	-	90	48.780	Pundamilia_nyererei
ENSCPOG00000012314	RALYL	77	53.680	ENSPNAG00000015686	hnrnpc	74	54.545	Pygocentrus_nattereri
ENSCPOG00000012314	RALYL	83	51.406	ENSPNAG00000019200	zgc:55733	92	47.766	Pygocentrus_nattereri
ENSCPOG00000012314	RALYL	100	95.548	ENSRROG00000023925	RALYL	96	93.836	Rhinopithecus_roxellana
ENSCPOG00000012314	RALYL	77	55.794	ENSSFOG00015012924	-	96	67.368	Scleropages_formosus
ENSCPOG00000012314	RALYL	79	53.252	ENSSFOG00015012015	-	97	50.000	Scleropages_formosus
ENSCPOG00000012314	RALYL	78	51.073	ENSSMAG00000013592	-	71	50.211	Scophthalmus_maximus
ENSCPOG00000012314	RALYL	77	54.825	ENSSMAG00000011147	-	99	48.097	Scophthalmus_maximus
ENSCPOG00000012314	RALYL	92	43.408	ENSSDUG00000001723	-	87	42.173	Seriola_dumerili
ENSCPOG00000012314	RALYL	78	54.701	ENSSDUG00000006730	-	83	49.123	Seriola_dumerili
ENSCPOG00000012314	RALYL	74	57.273	ENSSLDG00000007454	-	68	54.709	Seriola_lalandi_dorsalis
ENSCPOG00000012314	RALYL	78	54.701	ENSSLDG00000007474	-	91	49.123	Seriola_lalandi_dorsalis
ENSCPOG00000012314	RALYL	79	92.632	ENSSARG00000002374	RALYL	78	92.473	Sorex_araneus
ENSCPOG00000012314	RALYL	75	55.605	ENSSPAG00000013996	-	66	56.054	Stegastes_partitus
ENSCPOG00000012314	RALYL	78	53.527	ENSSPAG00000023204	-	72	52.321	Stegastes_partitus
ENSCPOG00000012314	RALYL	98	90.345	ENSTGUG00000011689	RALYL	100	90.000	Taeniopygia_guttata
ENSCPOG00000012314	RALYL	74	53.846	ENSTRUG00000020158	-	87	45.196	Takifugu_rubripes
ENSCPOG00000012314	RALYL	79	52.564	ENSTNIG00000000334	-	99	47.482	Tetraodon_nigroviridis
ENSCPOG00000012314	RALYL	74	51.121	ENSTNIG00000007427	-	87	44.170	Tetraodon_nigroviridis
ENSCPOG00000012314	RALYL	87	86.220	ENSTBEG00000005551	RALYL	100	84.252	Tupaia_belangeri
ENSCPOG00000012314	RALYL	100	91.468	ENSTTRG00000015762	RALYL	100	91.468	Tursiops_truncatus
ENSCPOG00000012314	RALYL	99	92.069	ENSVPAG00000008501	RALYL	100	92.069	Vicugna_pacos
ENSCPOG00000012314	RALYL	54	61.111	ENSXCOG00000019434	-	73	57.225	Xiphophorus_couchianus
ENSCPOG00000012314	RALYL	94	46.619	ENSXCOG00000006552	-	88	46.735	Xiphophorus_couchianus
ENSCPOG00000012314	RALYL	74	55.046	ENSXMAG00000022849	-	86	47.203	Xiphophorus_maculatus
ENSCPOG00000012314	RALYL	93	48.214	ENSXMAG00000009333	-	87	46.454	Xiphophorus_maculatus