EuRBPDB

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  • Description
  • RBDs
  • Transcripts
  • Gene Model
  • PPI
  • Paralogs
  • Orthologs
Description
Ensembl ID
ENSCPOG00000012361 (Gene tree)
Gene ID
100733269
Gene Symbol
MSI1
Alias
-
Full Name
musashi RNA binding protein 1
Gene Type
protein_coding
Species
Cavia_porcellus
Status
putative
Strand
Minus strand
Length
24583 bases
Position
chrDS562859.1:5456030-5480612
Accession
100733269
RBP type
canonical RBP
Summary
-
RNA binding domains(RBDs)
Protein IDDomain Pfam IDE-value Domain number Total number
ENSCPOP00000032556RRM_1PF00076.224e-3412
ENSCPOP00000032556RRM_1PF00076.224e-3422
ENSCPOP00000011123RRM_1PF00076.224.8e-3412
ENSCPOP00000011123RRM_1PF00076.224.8e-3422
Transcripts
Transcript IDNameLengthRefSeq ID Protein IDLengthRefSeq IDUniportKB ID
ENSCPOT00000012479MSI1-2021086-ENSCPOP00000011123361 (aa)-H0VL96
ENSCPOT00000037151MSI1-2011488XM_013142259ENSCPOP00000032556342 (aa)XP_012997713A0A286Y4W7
Gene Model
Click here to download ENSCPOG00000012361's gene model file
Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012361's network
Paralogs
Ensembl IDGene SymbolCoverageIdentiy ParalogGene SymbolCoverageIdentiy
ENSCPOG00000012361MSI15141.618ENSCPOG00000021077-7438.565
ENSCPOG00000012361MSI15042.775ENSCPOG00000004251HNRNPA35943.646
ENSCPOG00000012361MSI15043.023ENSCPOG00000011301-5343.407
ENSCPOG00000012361MSI15641.262ENSCPOG00000020185DAZAP19444.048
ENSCPOG00000012361MSI15243.750ENSCPOG00000036630HNRNPA2B16643.750
ENSCPOG00000012361MSI15242.222ENSCPOG00000040150-6638.627
ENSCPOG00000012361MSI15234.932ENSCPOG00000011619TARDBP5433.735
ENSCPOG00000012361MSI110066.877ENSCPOG00000034042MSI29968.454
ENSCPOG00000012361MSI17236.842ENSCPOG00000012781RBM385936.842
Orthologs
Ensembl IDGene SymbolCoverageIdentiy OrthologGene SymbolCoverageIdentiy Species
ENSCPOG00000012361MSI1100100.000ENSG00000135097MSI198100.000Homo_sapiens
ENSCPOG00000012361MSI110085.965ENSAPOG00000003191MSI19485.965Acanthochromis_polyacanthus
ENSCPOG00000012361MSI110085.965ENSAPOG00000023458-9585.756Acanthochromis_polyacanthus
ENSCPOG00000012361MSI110081.365ENSAMEG00000013302MSI110081.365Ailuropoda_melanoleuca
ENSCPOG00000012361MSI19682.675ENSACIG00000017754-7882.675Amphilophus_citrinellus
ENSCPOG00000012361MSI110085.965ENSAOCG00000003804MSI19485.965Amphiprion_ocellaris
ENSCPOG00000012361MSI110077.485ENSAOCG00000009031-9677.551Amphiprion_ocellaris
ENSCPOG00000012361MSI110085.965ENSAPEG00000003245MSI19485.965Amphiprion_percula
ENSCPOG00000012361MSI110085.965ENSAPEG00000006857-8085.756Amphiprion_percula
ENSCPOG00000012361MSI110085.106ENSATEG00000017059MSI19584.848Anabas_testudineus
ENSCPOG00000012361MSI110080.702ENSATEG00000023779-9480.058Anabas_testudineus
ENSCPOG00000012361MSI110097.076ENSACAG00000002762MSI19994.413Anolis_carolinensis
ENSCPOG00000012361MSI18196.403ENSANAG00000027901-9296.403Aotus_nancymaae
ENSCPOG00000012361MSI1100100.000ENSANAG00000027151MSI198100.000Aotus_nancymaae
ENSCPOG00000012361MSI110085.380ENSACLG00000011230MSI19485.380Astatotilapia_calliptera
ENSCPOG00000012361MSI110085.380ENSACLG00000000117-10085.337Astatotilapia_calliptera
ENSCPOG00000012361MSI110083.735ENSAMXG00000038960msi17683.735Astyanax_mexicanus
ENSCPOG00000012361MSI1100100.000ENSBTAG00000009800MSI1100100.000Bos_taurus
ENSCPOG00000012361MSI1100100.000ENSCJAG00000008578MSI198100.000Callithrix_jacchus
ENSCPOG00000012361MSI110099.708ENSCAFG00000010283MSI19899.708Canis_familiaris
ENSCPOG00000012361MSI1100100.000ENSCAFG00020020585MSI1100100.000Canis_lupus_dingo
ENSCPOG00000012361MSI110094.269ENSCHIG00000024304MSI19894.269Capra_hircus
ENSCPOG00000012361MSI1100100.000ENSTSYG00000033949MSI195100.000Carlito_syrichta
ENSCPOG00000012361MSI1100100.000ENSCAPG00000003919MSI18989.776Cavia_aperea
ENSCPOG00000012361MSI1100100.000ENSCCAG00000035567MSI198100.000Cebus_capucinus
ENSCPOG00000012361MSI1100100.000ENSCATG00000030019MSI198100.000Cercocebus_atys
ENSCPOG00000012361MSI1100100.000ENSCLAG00000011329MSI1100100.000Chinchilla_lanigera
ENSCPOG00000012361MSI17396.109ENSCSAG00000002265MSI19493.040Chlorocebus_sabaeus
ENSCPOG00000012361MSI110096.199ENSCPBG00000011349MSI110096.199Chrysemys_picta_bellii
ENSCPOG00000012361MSI1100100.000ENSCANG00000040651MSI1100100.000Colobus_angolensis_palliatus
ENSCPOG00000012361MSI1100100.000ENSCGRG00001018883Msi198100.000Cricetulus_griseus_chok1gshd
ENSCPOG00000012361MSI1100100.000ENSCGRG00000002191Msi172100.000Cricetulus_griseus_crigri
ENSCPOG00000012361MSI110078.299ENSCSEG00000011032MSI110078.299Cynoglossus_semilaevis
ENSCPOG00000012361MSI110084.503ENSCSEG00000008352-9584.302Cynoglossus_semilaevis
ENSCPOG00000012361MSI110085.673ENSCSEG00000005834-9485.673Cynoglossus_semilaevis
ENSCPOG00000012361MSI16868.398ENSCVAG00000017463-8968.398Cyprinodon_variegatus
ENSCPOG00000012361MSI110085.965ENSCVAG00000009100MSI19585.756Cyprinodon_variegatus
ENSCPOG00000012361MSI110081.402ENSDARG00000010710msi110085.022Danio_rerio
ENSCPOG00000012361MSI18582.096ENSDARG00000102015CABZ01037298.18982.096Danio_rerio
ENSCPOG00000012361MSI110089.970ENSDNOG00000005713MSI19189.970Dasypus_novemcinctus
ENSCPOG00000012361MSI110099.102ENSDORG00000005610Msi19499.102Dipodomys_ordii
ENSCPOG00000012361MSI110095.732ENSETEG00000004756MSI110095.732Echinops_telfairi
ENSCPOG00000012361MSI1100100.000ENSEASG00005004736MSI198100.000Equus_asinus_asinus
ENSCPOG00000012361MSI1100100.000ENSECAG00000017526MSI198100.000Equus_caballus
ENSCPOG00000012361MSI110081.232ENSELUG00000023280-10080.938Esox_lucius
ENSCPOG00000012361MSI110080.387ENSELUG00000023219MSI19280.387Esox_lucius
ENSCPOG00000012361MSI1100100.000ENSFCAG00000011007MSI198100.000Felis_catus
ENSCPOG00000012361MSI110095.820ENSFALG00000007574MSI110095.820Ficedula_albicollis
ENSCPOG00000012361MSI110099.695ENSFDAG00000019586MSI110099.695Fukomys_damarensis
ENSCPOG00000012361MSI110086.257ENSFHEG00000022446MSI19586.047Fundulus_heteroclitus
ENSCPOG00000012361MSI110085.965ENSFHEG00000003560-9485.965Fundulus_heteroclitus
ENSCPOG00000012361MSI110083.626ENSGMOG00000001006MSI19583.140Gadus_morhua
ENSCPOG00000012361MSI110077.778ENSGMOG00000017838-9577.616Gadus_morhua
ENSCPOG00000012361MSI110095.238ENSGALG00000007227MSI19686.792Gallus_gallus
ENSCPOG00000012361MSI19767.868ENSGAFG00000005860-9067.868Gambusia_affinis
ENSCPOG00000012361MSI110085.380ENSGAFG00000021522MSI19485.380Gambusia_affinis
ENSCPOG00000012361MSI110084.795ENSGACG00000012679MSI19584.593Gasterosteus_aculeatus
ENSCPOG00000012361MSI110081.871ENSGACG00000008674-9581.686Gasterosteus_aculeatus
ENSCPOG00000012361MSI110096.199ENSGAGG00000016037MSI19794.587Gopherus_agassizii
ENSCPOG00000012361MSI1100100.000ENSGGOG00000010328MSI1100100.000Gorilla_gorilla
ENSCPOG00000012361MSI110085.380ENSHBUG00000021921MSI19485.380Haplochromis_burtoni
ENSCPOG00000012361MSI110085.380ENSHBUG00000011841-9585.174Haplochromis_burtoni
ENSCPOG00000012361MSI110099.708ENSHGLG00000012782MSI19899.708Heterocephalus_glaber_female
ENSCPOG00000012361MSI110099.695ENSHGLG00100016848MSI110099.695Heterocephalus_glaber_male
ENSCPOG00000012361MSI110080.938ENSHCOG00000012019MSI110080.938Hippocampus_comes
ENSCPOG00000012361MSI110083.891ENSHCOG00000012067-8983.891Hippocampus_comes
ENSCPOG00000012361MSI110083.918ENSIPUG00000001976msi19683.721Ictalurus_punctatus
ENSCPOG00000012361MSI1100100.000ENSSTOG00000009799MSI1100100.000Ictidomys_tridecemlineatus
ENSCPOG00000012361MSI110083.626ENSJJAG00000010643-9583.140Jaculus_jaculus
ENSCPOG00000012361MSI1100100.000ENSJJAG00000010463Msi198100.000Jaculus_jaculus
ENSCPOG00000012361MSI110085.088ENSKMAG00000011251MSI19584.884Kryptolebias_marmoratus
ENSCPOG00000012361MSI110083.578ENSKMAG00000019877-10083.578Kryptolebias_marmoratus
ENSCPOG00000012361MSI110085.380ENSLBEG00000008789MSI19585.174Labrus_bergylta
ENSCPOG00000012361MSI110085.380ENSLBEG00000001375-9485.380Labrus_bergylta
ENSCPOG00000012361MSI110087.500ENSLACG00000018287MSI110087.500Latimeria_chalumnae
ENSCPOG00000012361MSI19689.426ENSLAFG00000009412MSI110089.426Loxodonta_africana
ENSCPOG00000012361MSI1100100.000ENSMFAG00000001798MSI1100100.000Macaca_fascicularis
ENSCPOG00000012361MSI1100100.000ENSMMUG00000031527MSI198100.000Macaca_mulatta
ENSCPOG00000012361MSI1100100.000ENSMNEG00000040034MSI198100.000Macaca_nemestrina
ENSCPOG00000012361MSI1100100.000ENSMLEG00000003921MSI1100100.000Mandrillus_leucophaeus
ENSCPOG00000012361MSI110085.965ENSMAMG00000018426-9485.965Mastacembelus_armatus
ENSCPOG00000012361MSI110084.795ENSMAMG00000002279MSI19584.593Mastacembelus_armatus
ENSCPOG00000012361MSI110085.380ENSMZEG00005026892MSI19485.380Maylandia_zebra
ENSCPOG00000012361MSI110085.380ENSMZEG00005000340-9585.174Maylandia_zebra
ENSCPOG00000012361MSI16498.817ENSMGAG00000016518-10098.817Meleagris_gallopavo
ENSCPOG00000012361MSI171100.000ENSMAUG00000016820Msi1100100.000Mesocricetus_auratus
ENSCPOG00000012361MSI1100100.000ENSMICG00000033181MSI198100.000Microcebus_murinus
ENSCPOG00000012361MSI110099.708ENSMOCG00000002286Msi19899.708Microtus_ochrogaster
ENSCPOG00000012361MSI110076.316ENSMMOG00000010492MSI19476.316Mola_mola
ENSCPOG00000012361MSI110080.415ENSMMOG00000012265-9980.415Mola_mola
ENSCPOG00000012361MSI19667.771ENSMODG00000003189-10067.771Monodelphis_domestica
ENSCPOG00000012361MSI110085.044ENSMALG00000001426-10085.044Monopterus_albus
ENSCPOG00000012361MSI110085.380ENSMALG00000017889MSI19585.174Monopterus_albus
ENSCPOG00000012361MSI110099.415MGP_CAROLIEiJ_G0027626Msi19899.415Mus_caroli
ENSCPOG00000012361MSI110099.415ENSMUSG00000054256Msi19899.415Mus_musculus
ENSCPOG00000012361MSI110099.123MGP_PahariEiJ_G0024206Msi19899.123Mus_pahari
ENSCPOG00000012361MSI110099.415MGP_SPRETEiJ_G0028624Msi19899.415Mus_spretus
ENSCPOG00000012361MSI1100100.000ENSMPUG00000003168MSI1100100.000Mustela_putorius_furo
ENSCPOG00000012361MSI110090.179ENSMLUG00000010313MSI110090.179Myotis_lucifugus
ENSCPOG00000012361MSI1100100.000ENSNGAG00000014508Msi191100.000Nannospalax_galili
ENSCPOG00000012361MSI19377.432ENSNBRG00000018012MSI19977.432Neolamprologus_brichardi
ENSCPOG00000012361MSI110085.380ENSNBRG00000000841-9585.174Neolamprologus_brichardi
ENSCPOG00000012361MSI19689.634ENSNLEG00000015636MSI110089.634Nomascus_leucogenys
ENSCPOG00000012361MSI110077.744ENSMEUG00000015759MSI110077.744Notamacropus_eugenii
ENSCPOG00000012361MSI19692.063ENSOPRG00000016879MSI110092.063Ochotona_princeps
ENSCPOG00000012361MSI1100100.000ENSODEG00000006328MSI1100100.000Octodon_degus
ENSCPOG00000012361MSI110085.380ENSONIG00000011182MSI19585.174Oreochromis_niloticus
ENSCPOG00000012361MSI110085.673ENSONIG00000019452-9585.465Oreochromis_niloticus
ENSCPOG00000012361MSI110099.678ENSOCUG00000027716MSI110099.678Oryctolagus_cuniculus
ENSCPOG00000012361MSI110085.965ENSORLG00000019978-9585.756Oryzias_latipes
ENSCPOG00000012361MSI110085.965ENSORLG00000029593MSI19485.965Oryzias_latipes
ENSCPOG00000012361MSI110085.965ENSORLG00020001208-6785.965Oryzias_latipes_hni
ENSCPOG00000012361MSI110085.965ENSORLG00020008266MSI19983.041Oryzias_latipes_hni
ENSCPOG00000012361MSI110085.965ENSORLG00015013672-7282.267Oryzias_latipes_hsok
ENSCPOG00000012361MSI110085.965ENSORLG00015003916MSI19983.041Oryzias_latipes_hsok
ENSCPOG00000012361MSI110085.965ENSOMEG00000017536MSI110082.991Oryzias_melastigma
ENSCPOG00000012361MSI110086.842ENSOMEG00000002272-9786.842Oryzias_melastigma
ENSCPOG00000012361MSI110099.130ENSOGAG00000003847MSI19899.130Otolemur_garnettii
ENSCPOG00000012361MSI110096.061ENSOARG00000012097MSI110096.061Ovis_aries
ENSCPOG00000012361MSI1100100.000ENSPPAG00000043073MSI1100100.000Pan_paniscus
ENSCPOG00000012361MSI1100100.000ENSPPRG00000000370MSI198100.000Panthera_pardus
ENSCPOG00000012361MSI1100100.000ENSPTIG00000008913MSI1100100.000Panthera_tigris_altaica
ENSCPOG00000012361MSI1100100.000ENSPTRG00000005531MSI198100.000Pan_troglodytes
ENSCPOG00000012361MSI110099.708ENSPANG00000006335MSI19899.708Papio_anubis
ENSCPOG00000012361MSI110086.550ENSPKIG00000016497MSI19586.337Paramormyrops_kingsleyae
ENSCPOG00000012361MSI110085.673ENSPKIG00000023575-9585.465Paramormyrops_kingsleyae
ENSCPOG00000012361MSI110092.105ENSPSIG00000011608-9392.105Pelodiscus_sinensis
ENSCPOG00000012361MSI18592.576ENSPSIG00000009621-10092.576Pelodiscus_sinensis
ENSCPOG00000012361MSI19681.763ENSPMGG00000000514MSI19781.763Periophthalmus_magnuspinnatus
ENSCPOG00000012361MSI110070.640ENSPMGG00000007743-8971.014Periophthalmus_magnuspinnatus
ENSCPOG00000012361MSI110098.220ENSPEMG00000010491Msi19598.220Peromyscus_maniculatus_bairdii
ENSCPOG00000012361MSI110085.965ENSPFOG00000013113MSI19585.756Poecilia_formosa
ENSCPOG00000012361MSI110085.965ENSPFOG00000008319-8185.965Poecilia_formosa
ENSCPOG00000012361MSI110085.965ENSPLAG00000014025-9585.756Poecilia_latipinna
ENSCPOG00000012361MSI110085.965ENSPLAG00000012431-9185.965Poecilia_latipinna
ENSCPOG00000012361MSI110085.965ENSPMEG00000012796MSI19585.756Poecilia_mexicana
ENSCPOG00000012361MSI110085.380ENSPMEG00000007025-9477.843Poecilia_mexicana
ENSCPOG00000012361MSI16578.571ENSPREG00000014574-10078.571Poecilia_reticulata
ENSCPOG00000012361MSI110082.371ENSPREG00000021416-9480.352Poecilia_reticulata
ENSCPOG00000012361MSI110099.123ENSPPYG00000005027MSI19899.123Pongo_abelii
ENSCPOG00000012361MSI178100.000ENSPCAG00000002300MSI110076.923Procavia_capensis
ENSCPOG00000012361MSI1100100.000ENSPCOG00000017341MSI198100.000Propithecus_coquereli
ENSCPOG00000012361MSI110082.927ENSPVAG00000002225MSI110082.927Pteropus_vampyrus
ENSCPOG00000012361MSI110085.380ENSPNYG00000004379MSI19485.380Pundamilia_nyererei
ENSCPOG00000012361MSI110085.380ENSPNYG00000002529-9585.174Pundamilia_nyererei
ENSCPOG00000012361MSI110084.211ENSPNAG00000019337msi19584.012Pygocentrus_nattereri
ENSCPOG00000012361MSI110099.678ENSRNOG00000001156Msi110099.678Rattus_norvegicus
ENSCPOG00000012361MSI1100100.000ENSRBIG00000036889MSI1100100.000Rhinopithecus_bieti
ENSCPOG00000012361MSI110099.697ENSRROG00000041076MSI19399.697Rhinopithecus_roxellana
ENSCPOG00000012361MSI1100100.000ENSSBOG00000030259MSI198100.000Saimiri_boliviensis_boliviensis
ENSCPOG00000012361MSI110087.255ENSSHAG00000006834MSI110087.255Sarcophilus_harrisii
ENSCPOG00000012361MSI110088.012ENSSFOG00015005350MSI19688.012Scleropages_formosus
ENSCPOG00000012361MSI110086.842ENSSFOG00015014964-9586.842Scleropages_formosus
ENSCPOG00000012361MSI110085.818ENSSMAG00000009156-7185.818Scophthalmus_maximus
ENSCPOG00000012361MSI110081.763ENSSMAG00000018824MSI19781.763Scophthalmus_maximus
ENSCPOG00000012361MSI110085.673ENSSDUG00000022697-9981.065Seriola_dumerili
ENSCPOG00000012361MSI110085.673ENSSDUG00000001027MSI19585.465Seriola_dumerili
ENSCPOG00000012361MSI110079.822ENSSLDG00000018706-9981.065Seriola_lalandi_dorsalis
ENSCPOG00000012361MSI110085.673ENSSLDG00000016832MSI19585.465Seriola_lalandi_dorsalis
ENSCPOG00000012361MSI110095.614ENSSPUG00000015741MSI110095.614Sphenodon_punctatus
ENSCPOG00000012361MSI16568.750ENSSPAG00000014085-10068.750Stegastes_partitus
ENSCPOG00000012361MSI110086.217ENSSPAG00000013098-10086.217Stegastes_partitus
ENSCPOG00000012361MSI110099.708ENSSSCG00000029365MSI110099.678Sus_scrofa
ENSCPOG00000012361MSI110096.784ENSTGUG00000009534MSI110096.784Taeniopygia_guttata
ENSCPOG00000012361MSI18680.952ENSTRUG00000016249MSI110073.783Takifugu_rubripes
ENSCPOG00000012361MSI110075.988ENSTRUG00000015636-7975.988Takifugu_rubripes
ENSCPOG00000012361MSI110062.360ENSTNIG00000019814-9662.291Tetraodon_nigroviridis
ENSCPOG00000012361MSI110080.290ENSTNIG00000011469MSI19580.115Tetraodon_nigroviridis
ENSCPOG00000012361MSI110089.377ENSTBEG00000007182MSI110089.377Tupaia_belangeri
ENSCPOG00000012361MSI110081.287ENSTTRG00000005663MSI110081.287Tursiops_truncatus
ENSCPOG00000012361MSI17292.694ENSUAMG00000015514MSI19492.694Ursus_americanus
ENSCPOG00000012361MSI110092.405ENSUMAG00000006176MSI19092.405Ursus_maritimus
ENSCPOG00000012361MSI1100100.000ENSVVUG00000020993MSI110099.099Vulpes_vulpes
ENSCPOG00000012361MSI110091.860ENSXETG00000012216msi19591.908Xenopus_tropicalis
ENSCPOG00000012361MSI110071.930ENSXCOG00000017605MSI18971.930Xiphophorus_couchianus
ENSCPOG00000012361MSI110085.965ENSXMAG00000027103MSI19078.078Xiphophorus_maculatus
ENSCPOG00000012361MSI110085.673ENSXMAG00000018237-9485.673Xiphophorus_maculatus

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