EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000012365 (Gene tree)
Gene ID: 100713180
Gene Symbol: RBM42
Alias: MGC10433
Full Name: RNA binding motif protein 42
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 9727 bases
Position: chrDS562911.1:983229-992955
Accession: 100713180
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000022599	RRM_1	PF00076.22	5.4e-18	1	1
ENSCPOP00000011127	RRM_1	PF00076.22	6e-18	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012483	RBM42-202	1684	XM_003466649	ENSCPOP00000011127	481 (aa)	XP_003466697	H0VLA0
ENSCPOT00000040856	RBM42-201	2161	XM_005002253	ENSCPOP00000022599	452 (aa)	XP_005002310	A0A286XB18

Gene Model

Click here to download ENSCPOG00000012365's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012365's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000012365	RBM42	99	98.004	ENSG00000126254	RBM42	100	100.000	Homo_sapiens
ENSCPOG00000012365	RBM42	99	97.286	ENSAMEG00000000524	RBM42	100	97.286	Ailuropoda_melanoleuca
ENSCPOG00000012365	RBM42	99	97.484	ENSANAG00000027537	RBM42	100	100.000	Aotus_nancymaae
ENSCPOG00000012365	RBM42	99	97.694	ENSBTAG00000013440	RBM42	100	97.694	Bos_taurus
ENSCPOG00000012365	RBM42	99	98.438	ENSCJAG00000010220	RBM42	100	100.000	Callithrix_jacchus
ENSCPOG00000012365	RBM42	99	91.405	ENSCAFG00020018628	RBM42	96	100.000	Canis_lupus_dingo
ENSCPOG00000012365	RBM42	99	97.991	ENSCHIG00000009518	RBM42	100	97.991	Capra_hircus
ENSCPOG00000012365	RBM42	99	97.490	ENSTSYG00000014688	RBM42	100	100.000	Carlito_syrichta
ENSCPOG00000012365	RBM42	80	100.000	ENSCAPG00000009566	RBM42	99	100.000	Cavia_aperea
ENSCPOG00000012365	RBM42	99	98.113	ENSCCAG00000034440	RBM42	100	100.000	Cebus_capucinus
ENSCPOG00000012365	RBM42	99	97.783	ENSCATG00000041924	RBM42	100	100.000	Cercocebus_atys
ENSCPOG00000012365	RBM42	100	98.753	ENSCLAG00000012865	RBM42	100	98.753	Chinchilla_lanigera
ENSCPOG00000012365	RBM42	99	97.783	ENSCSAG00000004422	RBM42	100	97.783	Chlorocebus_sabaeus
ENSCPOG00000012365	RBM42	99	87.841	ENSCANG00000030272	RBM42	98	87.607	Colobus_angolensis_palliatus
ENSCPOG00000012365	RBM42	99	96.659	ENSCGRG00001018540	Rbm42	99	96.659	Cricetulus_griseus_chok1gshd
ENSCPOG00000012365	RBM42	99	96.896	ENSDNOG00000037397	RBM42	100	96.896	Dasypus_novemcinctus
ENSCPOG00000012365	RBM42	100	96.681	ENSDORG00000013001	Rbm42	100	96.681	Dipodomys_ordii
ENSCPOG00000012365	RBM42	75	94.203	ENSETEG00000007878	RBM42	72	93.333	Echinops_telfairi
ENSCPOG00000012365	RBM42	99	98.214	ENSEASG00005001074	RBM42	100	98.214	Equus_asinus_asinus
ENSCPOG00000012365	RBM42	99	98.214	ENSECAG00000018215	RBM42	100	98.214	Equus_caballus
ENSCPOG00000012365	RBM42	99	97.904	ENSFCAG00000006376	RBM42	100	100.000	Felis_catus
ENSCPOG00000012365	RBM42	100	97.577	ENSFDAG00000007440	RBM42	100	97.577	Fukomys_damarensis
ENSCPOG00000012365	RBM42	99	98.004	ENSGGOG00000009972	RBM42	100	100.000	Gorilla_gorilla
ENSCPOG00000012365	RBM42	100	96.681	ENSHGLG00000008418	RBM42	100	96.681	Heterocephalus_glaber_female
ENSCPOG00000012365	RBM42	100	96.681	ENSHGLG00100018667	RBM42	100	96.681	Heterocephalus_glaber_male
ENSCPOG00000012365	RBM42	100	98.230	ENSSTOG00000013050	RBM42	100	98.230	Ictidomys_tridecemlineatus
ENSCPOG00000012365	RBM42	100	96.239	ENSJJAG00000010421	Rbm42	100	96.239	Jaculus_jaculus
ENSCPOG00000012365	RBM42	97	92.735	ENSLAFG00000014993	RBM42	97	94.231	Loxodonta_africana
ENSCPOG00000012365	RBM42	99	97.783	ENSMFAG00000002758	RBM42	100	100.000	Macaca_fascicularis
ENSCPOG00000012365	RBM42	99	97.550	ENSMMUG00000018954	RBM42	100	100.000	Macaca_mulatta
ENSCPOG00000012365	RBM42	99	97.783	ENSMNEG00000030009	RBM42	100	100.000	Macaca_nemestrina
ENSCPOG00000012365	RBM42	99	97.783	ENSMLEG00000036119	RBM42	100	100.000	Mandrillus_leucophaeus
ENSCPOG00000012365	RBM42	99	98.532	ENSMICG00000009880	RBM42	100	100.000	Microcebus_murinus
ENSCPOG00000012365	RBM42	100	96.018	ENSMOCG00000000405	Rbm42	100	96.018	Microtus_ochrogaster
ENSCPOG00000012365	RBM42	99	97.118	MGP_CAROLIEiJ_G0029536	Rbm42	99	97.118	Mus_caroli
ENSCPOG00000012365	RBM42	99	97.118	ENSMUSG00000036733	Rbm42	99	97.118	Mus_musculus
ENSCPOG00000012365	RBM42	99	96.674	MGP_PahariEiJ_G0012770	Rbm42	99	96.674	Mus_pahari
ENSCPOG00000012365	RBM42	99	97.118	MGP_SPRETEiJ_G0030632	Rbm42	99	97.118	Mus_spretus
ENSCPOG00000012365	RBM42	99	98.438	ENSMPUG00000006288	RBM42	100	98.438	Mustela_putorius_furo
ENSCPOG00000012365	RBM42	99	96.855	ENSMLUG00000011334	RBM42	100	96.855	Myotis_lucifugus
ENSCPOG00000012365	RBM42	100	96.681	ENSNGAG00000019698	Rbm42	100	96.681	Nannospalax_galili
ENSCPOG00000012365	RBM42	69	97.605	ENSNLEG00000011272	-	94	90.782	Nomascus_leucogenys
ENSCPOG00000012365	RBM42	95	81.818	ENSMEUG00000016300	RBM42	98	83.475	Notamacropus_eugenii
ENSCPOG00000012365	RBM42	99	94.340	ENSOPRG00000001229	RBM42	98	92.521	Ochotona_princeps
ENSCPOG00000012365	RBM42	100	98.451	ENSODEG00000013705	RBM42	99	98.956	Octodon_degus
ENSCPOG00000012365	RBM42	99	97.339	ENSOCUG00000003337	RBM42	100	97.339	Oryctolagus_cuniculus
ENSCPOG00000012365	RBM42	99	96.855	ENSOGAG00000004144	RBM42	100	96.855	Otolemur_garnettii
ENSCPOG00000012365	RBM42	97	89.293	ENSOARG00000004926	RBM42	96	92.077	Ovis_aries
ENSCPOG00000012365	RBM42	99	98.438	ENSPPAG00000037315	RBM42	100	100.000	Pan_paniscus
ENSCPOG00000012365	RBM42	99	97.904	ENSPPRG00000016784	RBM42	100	100.000	Panthera_pardus
ENSCPOG00000012365	RBM42	99	97.484	ENSPTIG00000019270	RBM42	100	100.000	Panthera_tigris_altaica
ENSCPOG00000012365	RBM42	99	98.004	ENSPTRG00000010852	RBM42	100	100.000	Pan_troglodytes
ENSCPOG00000012365	RBM42	99	97.275	ENSPANG00000017032	RBM42	100	100.000	Papio_anubis
ENSCPOG00000012365	RBM42	100	96.903	ENSPEMG00000012065	Rbm42	100	96.903	Peromyscus_maniculatus_bairdii
ENSCPOG00000012365	RBM42	99	96.701	ENSPPYG00000009871	RBM42	100	96.701	Pongo_abelii
ENSCPOG00000012365	RBM42	88	95.410	ENSPCAG00000013053	RBM42	98	81.838	Procavia_capensis
ENSCPOG00000012365	RBM42	69	97.898	ENSPCOG00000020672	RBM42	81	97.898	Propithecus_coquereli
ENSCPOG00000012365	RBM42	99	98.532	ENSPCOG00000026433	-	100	100.000	Propithecus_coquereli
ENSCPOG00000012365	RBM42	99	97.484	ENSPVAG00000012815	RBM42	100	97.484	Pteropus_vampyrus
ENSCPOG00000012365	RBM42	99	96.896	ENSRNOG00000024278	Rbm42	99	96.896	Rattus_norvegicus
ENSCPOG00000012365	RBM42	99	97.783	ENSRBIG00000007566	RBM42	100	100.000	Rhinopithecus_bieti
ENSCPOG00000012365	RBM42	99	98.438	ENSRROG00000042313	RBM42	100	100.000	Rhinopithecus_roxellana
ENSCPOG00000012365	RBM42	84	98.276	ENSSBOG00000030666	RBM42	100	98.276	Saimiri_boliviensis_boliviensis
ENSCPOG00000012365	RBM42	99	87.292	ENSSARG00000010724	RBM42	100	87.292	Sorex_araneus
ENSCPOG00000012365	RBM42	99	97.768	ENSSSCG00000002905	RBM42	100	97.768	Sus_scrofa
ENSCPOG00000012365	RBM42	99	98.214	ENSUAMG00000020711	RBM42	100	98.214	Ursus_americanus
ENSCPOG00000012365	RBM42	99	97.904	ENSUMAG00000020223	RBM42	100	97.904	Ursus_maritimus
ENSCPOG00000012365	RBM42	99	98.214	ENSVVUG00000015117	RBM42	100	98.214	Vulpes_vulpes