EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Orthologs

Description

Ensembl ID: ENSCPOG00000012573 (Gene tree)
Gene ID: -
Gene Symbol: NCBP1
Alias: CBP80|NCBP|Sto1
Full Name: nuclear cap binding protein subunit 1
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Plus strand
Length: 47206 bases
Position: chrDS562882.1:19159054-19206259
Accession: 100735557
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000011311	MIF4G_like	PF09088.11	3.3e-36	1	1
ENSCPOP00000011311	MIF4G_like_2	PF09090.11	9.3e-86	1	1
ENSCPOP00000011311	MIF4G	PF02854.19	3e-30	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012693	NCBP1-201	2295	XM_003470714	ENSCPOP00000011311	764 (aa)	-	H0VLR0

Gene Model

Click here to download ENSCPOG00000012573's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012573's network

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000012573	NCBP1	99	97.653	ENSG00000136937	NCBP1	97	97.653	Homo_sapiens
ENSCPOG00000012573	NCBP1	98	82.959	ENSAPOG00000008002	NCBP1	95	82.563	Acanthochromis_polyacanthus
ENSCPOG00000012573	NCBP1	99	97.523	ENSAMEG00000004763	NCBP1	97	97.523	Ailuropoda_melanoleuca
ENSCPOG00000012573	NCBP1	98	83.466	ENSACIG00000000274	NCBP1	95	82.804	Amphilophus_citrinellus
ENSCPOG00000012573	NCBP1	98	83.091	ENSAOCG00000021148	NCBP1	95	82.695	Amphiprion_ocellaris
ENSCPOG00000012573	NCBP1	98	83.091	ENSAPEG00000001701	NCBP1	95	82.695	Amphiprion_percula
ENSCPOG00000012573	NCBP1	98	82.563	ENSATEG00000006929	NCBP1	95	82.166	Anabas_testudineus
ENSCPOG00000012573	NCBP1	98	90.489	ENSAPLG00000016318	NCBP1	100	90.621	Anas_platyrhynchos
ENSCPOG00000012573	NCBP1	97	87.733	ENSACAG00000004409	NCBP1	83	87.042	Anolis_carolinensis
ENSCPOG00000012573	NCBP1	98	99.599	ENSANAG00000025744	NCBP1	99	99.580	Aotus_nancymaae
ENSCPOG00000012573	NCBP1	98	82.563	ENSACLG00000014812	NCBP1	99	82.682	Astatotilapia_calliptera
ENSCPOG00000012573	NCBP1	98	81.028	ENSAMXG00000016364	NCBP1	95	80.501	Astyanax_mexicanus
ENSCPOG00000012573	NCBP1	99	97.132	ENSBTAG00000009732	NCBP1	97	97.132	Bos_taurus
ENSCPOG00000012573	NCBP1	98	34.238	WBGene00018156	ncbp-1	95	33.721	Caenorhabditis_elegans
ENSCPOG00000012573	NCBP1	99	97.653	ENSCJAG00000010840	NCBP1	99	99.441	Callithrix_jacchus
ENSCPOG00000012573	NCBP1	99	97.653	ENSCAFG00000002445	NCBP1	97	97.653	Canis_familiaris
ENSCPOG00000012573	NCBP1	99	97.653	ENSCAFG00020017997	NCBP1	100	99.414	Canis_lupus_dingo
ENSCPOG00000012573	NCBP1	99	96.871	ENSCHIG00000020139	NCBP1	97	96.871	Capra_hircus
ENSCPOG00000012573	NCBP1	50	95.385	ENSTSYG00000011914	NCBP1	95	94.805	Carlito_syrichta
ENSCPOG00000012573	NCBP1	84	89.688	ENSCAPG00000014252	NCBP1	90	89.531	Cavia_aperea
ENSCPOG00000012573	NCBP1	99	97.784	ENSCCAG00000032297	NCBP1	97	97.784	Cebus_capucinus
ENSCPOG00000012573	NCBP1	99	97.653	ENSCATG00000010052	NCBP1	99	99.430	Cercocebus_atys
ENSCPOG00000012573	NCBP1	99	97.914	ENSCLAG00000014339	NCBP1	97	97.914	Chinchilla_lanigera
ENSCPOG00000012573	NCBP1	99	97.653	ENSCSAG00000010929	NCBP1	97	97.653	Chlorocebus_sabaeus
ENSCPOG00000012573	NCBP1	91	97.458	ENSCHOG00000010332	NCBP1	88	97.458	Choloepus_hoffmanni
ENSCPOG00000012573	NCBP1	99	85.752	ENSCPBG00000024344	NCBP1	99	90.417	Chrysemys_picta_bellii
ENSCPOG00000012573	NCBP1	96	53.826	ENSCING00000008990	-	95	53.755	Ciona_intestinalis
ENSCPOG00000012573	NCBP1	96	52.863	ENSCSAVG00000005300	-	99	53.927	Ciona_savignyi
ENSCPOG00000012573	NCBP1	99	97.653	ENSCANG00000036913	NCBP1	99	99.441	Colobus_angolensis_palliatus
ENSCPOG00000012573	NCBP1	99	96.480	ENSCGRG00001015771	Ncbp1	97	96.480	Cricetulus_griseus_chok1gshd
ENSCPOG00000012573	NCBP1	99	96.480	ENSCGRG00000010311	Ncbp1	98	96.480	Cricetulus_griseus_crigri
ENSCPOG00000012573	NCBP1	98	82.166	ENSCSEG00000012377	NCBP1	99	82.797	Cynoglossus_semilaevis
ENSCPOG00000012573	NCBP1	98	80.211	ENSCVAG00000008795	NCBP1	95	80.871	Cyprinodon_variegatus
ENSCPOG00000012573	NCBP1	99	96.349	ENSDNOG00000006885	NCBP1	100	97.950	Dasypus_novemcinctus
ENSCPOG00000012573	NCBP1	99	92.987	ENSDORG00000013652	Ncbp1	99	92.987	Dipodomys_ordii
ENSCPOG00000012573	NCBP1	99	56.848	FBgn0022942	Cbp80	95	57.632	Drosophila_melanogaster
ENSCPOG00000012573	NCBP1	80	34.537	FBgn0038887	CG7907	81	34.537	Drosophila_melanogaster
ENSCPOG00000012573	NCBP1	88	93.886	ENSETEG00000009705	NCBP1	86	93.886	Echinops_telfairi
ENSCPOG00000012573	NCBP1	99	73.677	ENSEBUG00000008386	NCBP1	95	73.413	Eptatretus_burgeri
ENSCPOG00000012573	NCBP1	99	97.132	ENSEASG00005022795	NCBP1	97	97.132	Equus_asinus_asinus
ENSCPOG00000012573	NCBP1	99	97.262	ENSECAG00000013847	NCBP1	97	97.262	Equus_caballus
ENSCPOG00000012573	NCBP1	95	91.644	ENSEEUG00000015973	NCBP1	97	91.233	Erinaceus_europaeus
ENSCPOG00000012573	NCBP1	98	81.060	ENSELUG00000022519	NCBP1	98	81.854	Esox_lucius
ENSCPOG00000012573	NCBP1	99	97.523	ENSFCAG00000001206	NCBP1	97	97.523	Felis_catus
ENSCPOG00000012573	NCBP1	99	89.356	ENSFALG00000001193	NCBP1	97	89.488	Ficedula_albicollis
ENSCPOG00000012573	NCBP1	99	97.653	ENSFDAG00000010864	NCBP1	98	97.653	Fukomys_damarensis
ENSCPOG00000012573	NCBP1	98	81.794	ENSFHEG00000000655	NCBP1	95	81.266	Fundulus_heteroclitus
ENSCPOG00000012573	NCBP1	98	79.024	ENSGMOG00000008653	NCBP1	94	79.024	Gadus_morhua
ENSCPOG00000012573	NCBP1	99	90.584	ENSGALG00000002087	NCBP1	95	90.716	Gallus_gallus
ENSCPOG00000012573	NCBP1	98	82.314	ENSGAFG00000017787	NCBP1	95	82.181	Gambusia_affinis
ENSCPOG00000012573	NCBP1	98	81.818	ENSGACG00000016772	NCBP1	94	81.423	Gasterosteus_aculeatus
ENSCPOG00000012573	NCBP1	99	89.578	ENSGAGG00000019483	NCBP1	99	90.139	Gopherus_agassizii
ENSCPOG00000012573	NCBP1	99	97.653	ENSGGOG00000001376	NCBP1	99	99.441	Gorilla_gorilla
ENSCPOG00000012573	NCBP1	98	82.563	ENSHBUG00000020843	NCBP1	95	82.166	Haplochromis_burtoni
ENSCPOG00000012573	NCBP1	99	97.784	ENSHGLG00000001882	NCBP1	97	97.784	Heterocephalus_glaber_female
ENSCPOG00000012573	NCBP1	99	84.785	ENSHGLG00000018112	-	97	84.785	Heterocephalus_glaber_female
ENSCPOG00000012573	NCBP1	99	97.784	ENSHGLG00100013014	NCBP1	97	97.784	Heterocephalus_glaber_male
ENSCPOG00000012573	NCBP1	99	84.525	ENSHGLG00100017373	-	97	84.525	Heterocephalus_glaber_male
ENSCPOG00000012573	NCBP1	81	72.381	ENSHCOG00000000204	NCBP1	92	72.381	Hippocampus_comes
ENSCPOG00000012573	NCBP1	98	81.530	ENSIPUG00000007275	ncbp1	95	81.135	Ictalurus_punctatus
ENSCPOG00000012573	NCBP1	99	97.392	ENSSTOG00000002695	NCBP1	97	97.392	Ictidomys_tridecemlineatus
ENSCPOG00000012573	NCBP1	98	81.638	ENSKMAG00000003594	NCBP1	92	85.714	Kryptolebias_marmoratus
ENSCPOG00000012573	NCBP1	98	80.729	ENSLBEG00000011661	NCBP1	95	80.208	Labrus_bergylta
ENSCPOG00000012573	NCBP1	99	80.654	ENSLACG00000013955	NCBP1	95	80.131	Latimeria_chalumnae
ENSCPOG00000012573	NCBP1	98	71.242	ENSLOCG00000009579	NCBP1	95	71.391	Lepisosteus_oculatus
ENSCPOG00000012573	NCBP1	99	96.871	ENSLAFG00000005999	NCBP1	97	96.871	Loxodonta_africana
ENSCPOG00000012573	NCBP1	99	97.653	ENSMFAG00000030994	NCBP1	99	99.430	Macaca_fascicularis
ENSCPOG00000012573	NCBP1	99	97.653	ENSMMUG00000012281	NCBP1	99	99.430	Macaca_mulatta
ENSCPOG00000012573	NCBP1	99	97.653	ENSMNEG00000042790	NCBP1	97	97.653	Macaca_nemestrina
ENSCPOG00000012573	NCBP1	99	97.653	ENSMLEG00000030374	NCBP1	99	99.441	Mandrillus_leucophaeus
ENSCPOG00000012573	NCBP1	98	82.827	ENSMAMG00000014806	NCBP1	96	82.034	Mastacembelus_armatus
ENSCPOG00000012573	NCBP1	98	82.563	ENSMZEG00005003469	NCBP1	95	82.166	Maylandia_zebra
ENSCPOG00000012573	NCBP1	98	82.447	ENSMZEG00005009290	-	98	82.314	Maylandia_zebra
ENSCPOG00000012573	NCBP1	99	96.349	ENSMAUG00000020583	Ncbp1	97	96.349	Mesocricetus_auratus
ENSCPOG00000012573	NCBP1	99	97.262	ENSMICG00000012682	NCBP1	97	97.262	Microcebus_murinus
ENSCPOG00000012573	NCBP1	99	96.089	ENSMOCG00000015818	Ncbp1	97	96.089	Microtus_ochrogaster
ENSCPOG00000012573	NCBP1	94	82.238	ENSMMOG00000002610	NCBP1	99	82.098	Mola_mola
ENSCPOG00000012573	NCBP1	99	94.290	ENSMODG00000003202	NCBP1	94	94.024	Monodelphis_domestica
ENSCPOG00000012573	NCBP1	98	81.902	ENSMALG00000003547	NCBP1	95	81.374	Monopterus_albus
ENSCPOG00000012573	NCBP1	99	96.089	MGP_CAROLIEiJ_G0025982	Ncbp1	97	96.089	Mus_caroli
ENSCPOG00000012573	NCBP1	99	96.089	ENSMUSG00000028330	Ncbp1	97	96.089	Mus_musculus
ENSCPOG00000012573	NCBP1	99	96.349	MGP_PahariEiJ_G0028318	Ncbp1	97	96.349	Mus_pahari
ENSCPOG00000012573	NCBP1	99	96.089	MGP_SPRETEiJ_G0026945	Ncbp1	97	96.089	Mus_spretus
ENSCPOG00000012573	NCBP1	99	97.523	ENSMPUG00000006399	NCBP1	97	97.523	Mustela_putorius_furo
ENSCPOG00000012573	NCBP1	99	96.349	ENSMLUG00000015201	NCBP1	98	96.349	Myotis_lucifugus
ENSCPOG00000012573	NCBP1	99	96.349	ENSNGAG00000014101	Ncbp1	97	96.349	Nannospalax_galili
ENSCPOG00000012573	NCBP1	74	85.263	ENSNBRG00000014674	NCBP1	91	85.263	Neolamprologus_brichardi
ENSCPOG00000012573	NCBP1	99	97.653	ENSNLEG00000016909	NCBP1	99	99.441	Nomascus_leucogenys
ENSCPOG00000012573	NCBP1	89	95.045	ENSMEUG00000010672	NCBP1	87	92.793	Notamacropus_eugenii
ENSCPOG00000012573	NCBP1	82	100.000	ENSOPRG00000002144	-	83	100.000	Ochotona_princeps
ENSCPOG00000012573	NCBP1	99	97.653	ENSODEG00000003232	NCBP1	98	97.653	Octodon_degus
ENSCPOG00000012573	NCBP1	98	82.563	ENSONIG00000001502	NCBP1	95	82.166	Oreochromis_niloticus
ENSCPOG00000012573	NCBP1	78	95.812	ENSOANG00000001918	NCBP1	96	95.812	Ornithorhynchus_anatinus
ENSCPOG00000012573	NCBP1	98	96.946	ENSOCUG00000013853	NCBP1	94	96.946	Oryctolagus_cuniculus
ENSCPOG00000012573	NCBP1	98	80.815	ENSORLG00000011008	NCBP1	98	81.066	Oryzias_latipes
ENSCPOG00000012573	NCBP1	98	80.815	ENSORLG00020017455	NCBP1	98	77.437	Oryzias_latipes_hni
ENSCPOG00000012573	NCBP1	98	80.946	ENSORLG00015012127	NCBP1	95	80.552	Oryzias_latipes_hsok
ENSCPOG00000012573	NCBP1	98	81.209	ENSOMEG00000020698	NCBP1	95	81.078	Oryzias_melastigma
ENSCPOG00000012573	NCBP1	99	97.784	ENSOGAG00000013888	NCBP1	97	97.784	Otolemur_garnettii
ENSCPOG00000012573	NCBP1	99	96.871	ENSOARG00000011233	NCBP1	97	96.871	Ovis_aries
ENSCPOG00000012573	NCBP1	99	97.653	ENSPPAG00000026462	NCBP1	99	99.441	Pan_paniscus
ENSCPOG00000012573	NCBP1	99	97.653	ENSPPRG00000022574	NCBP1	97	97.653	Panthera_pardus
ENSCPOG00000012573	NCBP1	99	97.653	ENSPTIG00000018507	NCBP1	97	97.653	Panthera_tigris_altaica
ENSCPOG00000012573	NCBP1	99	97.653	ENSPTRG00000021167	NCBP1	97	97.653	Pan_troglodytes
ENSCPOG00000012573	NCBP1	99	97.653	ENSPANG00000025591	NCBP1	99	99.441	Papio_anubis
ENSCPOG00000012573	NCBP1	99	80.871	ENSPKIG00000015861	NCBP1	99	81.192	Paramormyrops_kingsleyae
ENSCPOG00000012573	NCBP1	66	89.648	ENSPSIG00000009558	NCBP1	100	89.844	Pelodiscus_sinensis
ENSCPOG00000012573	NCBP1	98	78.996	ENSPMGG00000020476	NCBP1	95	78.468	Periophthalmus_magnuspinnatus
ENSCPOG00000012573	NCBP1	99	96.089	ENSPEMG00000020105	Ncbp1	97	96.089	Peromyscus_maniculatus_bairdii
ENSCPOG00000012573	NCBP1	99	67.670	ENSPMAG00000005533	NCBP1	95	67.670	Petromyzon_marinus
ENSCPOG00000012573	NCBP1	99	94.024	ENSPCIG00000015800	NCBP1	94	94.715	Phascolarctos_cinereus
ENSCPOG00000012573	NCBP1	98	81.472	ENSPFOG00000004158	NCBP1	95	81.078	Poecilia_formosa
ENSCPOG00000012573	NCBP1	98	81.926	ENSPLAG00000020002	NCBP1	95	81.530	Poecilia_latipinna
ENSCPOG00000012573	NCBP1	98	81.926	ENSPMEG00000019821	NCBP1	95	81.530	Poecilia_mexicana
ENSCPOG00000012573	NCBP1	98	81.818	ENSPREG00000006035	NCBP1	95	81.423	Poecilia_reticulata
ENSCPOG00000012573	NCBP1	99	97.653	ENSPPYG00000019426	NCBP1	97	97.653	Pongo_abelii
ENSCPOG00000012573	NCBP1	87	98.621	ENSPCAG00000009943	NCBP1	85	98.621	Procavia_capensis
ENSCPOG00000012573	NCBP1	84	99.390	ENSPCOG00000020024	NCBP1	98	99.390	Propithecus_coquereli
ENSCPOG00000012573	NCBP1	99	97.001	ENSPVAG00000005924	NCBP1	97	97.001	Pteropus_vampyrus
ENSCPOG00000012573	NCBP1	94	82.821	ENSPNYG00000002140	NCBP1	99	82.682	Pundamilia_nyererei
ENSCPOG00000012573	NCBP1	98	81.818	ENSPNAG00000027753	NCBP1	98	81.616	Pygocentrus_nattereri
ENSCPOG00000012573	NCBP1	99	96.219	ENSRNOG00000023605	Ncbp1	97	96.219	Rattus_norvegicus
ENSCPOG00000012573	NCBP1	99	97.653	ENSRBIG00000043175	NCBP1	99	99.430	Rhinopithecus_bieti
ENSCPOG00000012573	NCBP1	99	97.653	ENSRROG00000029767	NCBP1	99	99.441	Rhinopithecus_roxellana
ENSCPOG00000012573	NCBP1	99	97.784	ENSSBOG00000019378	NCBP1	99	96.374	Saimiri_boliviensis_boliviensis
ENSCPOG00000012573	NCBP1	99	60.802	ENSSHAG00000015882	NCBP1	95	60.645	Sarcophilus_harrisii
ENSCPOG00000012573	NCBP1	99	80.876	ENSSFOG00015001872	NCBP1	96	80.876	Scleropages_formosus
ENSCPOG00000012573	NCBP1	98	81.638	ENSSMAG00000007463	NCBP1	95	81.374	Scophthalmus_maximus
ENSCPOG00000012573	NCBP1	98	82.713	ENSSDUG00000007019	NCBP1	95	82.713	Seriola_dumerili
ENSCPOG00000012573	NCBP1	98	82.431	ENSSLDG00000021924	NCBP1	95	82.034	Seriola_lalandi_dorsalis
ENSCPOG00000012573	NCBP1	86	90.830	ENSSARG00000007274	NCBP1	85	90.830	Sorex_araneus
ENSCPOG00000012573	NCBP1	99	81.673	ENSSPUG00000008609	NCBP1	95	81.673	Sphenodon_punctatus
ENSCPOG00000012573	NCBP1	98	82.959	ENSSPAG00000012550	NCBP1	95	82.563	Stegastes_partitus
ENSCPOG00000012573	NCBP1	99	97.523	ENSSSCG00000005366	NCBP1	97	97.523	Sus_scrofa
ENSCPOG00000012573	NCBP1	99	83.773	ENSTGUG00000001472	NCBP1	95	83.905	Taeniopygia_guttata
ENSCPOG00000012573	NCBP1	98	81.770	ENSTRUG00000005287	NCBP1	95	81.374	Takifugu_rubripes
ENSCPOG00000012573	NCBP1	99	94.003	ENSTBEG00000004035	NCBP1	97	94.003	Tupaia_belangeri
ENSCPOG00000012573	NCBP1	87	99.593	ENSTTRG00000000507	NCBP1	85	99.593	Tursiops_truncatus
ENSCPOG00000012573	NCBP1	99	97.523	ENSUAMG00000005471	NCBP1	97	97.523	Ursus_americanus
ENSCPOG00000012573	NCBP1	99	95.550	ENSUMAG00000011865	NCBP1	100	99.414	Ursus_maritimus
ENSCPOG00000012573	NCBP1	94	99.301	ENSVPAG00000010537	NCBP1	91	99.301	Vicugna_pacos
ENSCPOG00000012573	NCBP1	99	97.653	ENSVVUG00000019725	NCBP1	97	97.653	Vulpes_vulpes
ENSCPOG00000012573	NCBP1	99	80.637	ENSXETG00000010179	ncbp1	95	80.637	Xenopus_tropicalis
ENSCPOG00000012573	NCBP1	98	82.058	ENSXMAG00000018253	NCBP1	95	81.662	Xiphophorus_maculatus