EuRBPDB

Description

RBDs

Transcripts

Gene Model

PPI

Paralogs

Orthologs

Description

Ensembl ID: ENSCPOG00000012643 (Gene tree)
Gene ID: 100719273
Gene Symbol: SRL
Alias: SAR
Full Name: sarcalumenin
Gene Type: protein_coding
Species: Cavia_porcellus
Status: putative
Strand: Minus strand
Length: 40016 bases
Position: chrDS562859.1:24124969-24164984
Accession: 100719273
RBP type: canonical RBP
Summary: -

RNA binding domains(RBDs)

Protein ID	Domain	Pfam ID	E-value	Domain number	Total number
ENSCPOP00000011374	MMR_HSR1	PF01926.23	8.6e-09	1	1

Transcripts

Transcript ID	Name	Length	RefSeq ID	Protein ID	Length	RefSeq ID	UniportKB ID
ENSCPOT00000012764	SRL-201	1419	XM_013142235	ENSCPOP00000011374	472 (aa)	XP_012997689	H0VLW5

Gene Model

Click here to download ENSCPOG00000012643's gene model file

Protein-Protein Interaction (PPI)

Clik here to download ENSCPOG00000012643's network

Paralogs

Ensembl ID	Gene Symbol	Coverage	Identiy	Paralog	Gene Symbol	Coverage	Identiy
ENSCPOG00000012643	SRL	82	32.648	ENSCPOG00000026417	EHD2	68	32.812
ENSCPOG00000012643	SRL	79	32.440	ENSCPOG00000034108	EHD3	67	33.875
ENSCPOG00000012643	SRL	77	34.247	ENSCPOG00000008157	EHD1	67	34.247

Orthologs

Ensembl ID	Gene Symbol	Coverage	Identiy	Ortholog	Gene Symbol	Coverage	Identiy	Species
ENSCPOG00000012643	SRL	100	96.406	ENSG00000185739	SRL	100	97.912	Homo_sapiens
ENSCPOG00000012643	SRL	94	76.471	ENSAPOG00000012432	SRL	98	74.944	Acanthochromis_polyacanthus
ENSCPOG00000012643	SRL	100	80.508	ENSAPOG00000018093	srl	100	83.108	Acanthochromis_polyacanthus
ENSCPOG00000012643	SRL	98	96.753	ENSAMEG00000010862	SRL	52	96.753	Ailuropoda_melanoleuca
ENSCPOG00000012643	SRL	94	75.000	ENSACIG00000015419	SRL	99	75.000	Amphilophus_citrinellus
ENSCPOG00000012643	SRL	96	82.301	ENSACIG00000015799	srl	99	82.301	Amphilophus_citrinellus
ENSCPOG00000012643	SRL	96	74.561	ENSAOCG00000017049	SRL	99	74.561	Amphiprion_ocellaris
ENSCPOG00000012643	SRL	92	83.871	ENSAOCG00000007574	srl	100	83.871	Amphiprion_ocellaris
ENSCPOG00000012643	SRL	100	80.720	ENSAPEG00000006911	srl	96	82.522	Amphiprion_percula
ENSCPOG00000012643	SRL	96	70.989	ENSAPEG00000006533	SRL	99	70.769	Amphiprion_percula
ENSCPOG00000012643	SRL	100	80.508	ENSATEG00000024315	srl	97	81.978	Anabas_testudineus
ENSCPOG00000012643	SRL	94	73.407	ENSATEG00000009643	SRL	52	72.308	Anabas_testudineus
ENSCPOG00000012643	SRL	100	86.066	ENSACAG00000016380	SRL	85	89.224	Anolis_carolinensis
ENSCPOG00000012643	SRL	98	81.505	ENSACLG00000027685	srl	98	82.444	Astatotilapia_calliptera
ENSCPOG00000012643	SRL	94	72.967	ENSACLG00000024674	SRL	57	71.868	Astatotilapia_calliptera
ENSCPOG00000012643	SRL	99	79.618	ENSAMXG00000018789	srl	86	83.220	Astyanax_mexicanus
ENSCPOG00000012643	SRL	88	78.313	ENSAMXG00000038693	SRL	100	73.731	Astyanax_mexicanus
ENSCPOG00000012643	SRL	96	97.130	ENSBTAG00000001078	SRL	57	97.130	Bos_taurus
ENSCPOG00000012643	SRL	94	97.517	ENSCJAG00000019750	SRL	97	96.718	Callithrix_jacchus
ENSCPOG00000012643	SRL	97	96.957	ENSCAFG00000019233	SRL	84	97.788	Canis_familiaris
ENSCPOG00000012643	SRL	96	97.363	ENSCAFG00020025024	SRL	56	97.363	Canis_lupus_dingo
ENSCPOG00000012643	SRL	99	95.914	ENSCHIG00000017927	SRL	57	97.130	Capra_hircus
ENSCPOG00000012643	SRL	100	97.252	ENSTSYG00000007919	SRL	100	98.376	Carlito_syrichta
ENSCPOG00000012643	SRL	94	90.971	ENSCCAG00000032646	SRL	100	97.889	Cebus_capucinus
ENSCPOG00000012643	SRL	100	96.617	ENSCATG00000032227	-	100	96.617	Cercocebus_atys
ENSCPOG00000012643	SRL	100	99.153	ENSCLAG00000016242	SRL	100	99.153	Chinchilla_lanigera
ENSCPOG00000012643	SRL	82	97.143	ENSCHOG00000001618	SRL	52	97.143	Choloepus_hoffmanni
ENSCPOG00000012643	SRL	96	93.523	ENSCPBG00000026371	SRL	95	89.633	Chrysemys_picta_bellii
ENSCPOG00000012643	SRL	88	59.952	ENSCING00000005231	-	91	60.345	Ciona_intestinalis
ENSCPOG00000012643	SRL	100	96.617	ENSCANG00000035872	SRL	100	97.912	Colobus_angolensis_palliatus
ENSCPOG00000012643	SRL	100	97.669	ENSCGRG00001016630	Srl	100	97.669	Cricetulus_griseus_chok1gshd
ENSCPOG00000012643	SRL	100	97.669	ENSCGRG00000005458	Srl	100	97.669	Cricetulus_griseus_crigri
ENSCPOG00000012643	SRL	99	70.253	ENSCSEG00000011866	SRL	92	71.711	Cynoglossus_semilaevis
ENSCPOG00000012643	SRL	100	80.720	ENSCSEG00000016151	srl	97	81.718	Cynoglossus_semilaevis
ENSCPOG00000012643	SRL	100	80.720	ENSCVAG00000003513	srl	96	83.484	Cyprinodon_variegatus
ENSCPOG00000012643	SRL	94	75.000	ENSCVAG00000022465	SRL	60	74.115	Cyprinodon_variegatus
ENSCPOG00000012643	SRL	80	76.562	ENSDARG00000112959	CABZ01072309.1	90	82.558	Danio_rerio
ENSCPOG00000012643	SRL	100	81.780	ENSDARG00000104587	srl	97	83.480	Danio_rerio
ENSCPOG00000012643	SRL	96	96.916	ENSDNOG00000011643	SRL	54	96.916	Dasypus_novemcinctus
ENSCPOG00000012643	SRL	100	97.246	ENSDORG00000014807	Srl	100	97.246	Dipodomys_ordii
ENSCPOG00000012643	SRL	78	65.241	ENSEBUG00000015937	srl	88	67.816	Eptatretus_burgeri
ENSCPOG00000012643	SRL	96	96.247	ENSEASG00005000942	SRL	55	96.247	Equus_asinus_asinus
ENSCPOG00000012643	SRL	99	95.763	ENSECAG00000024219	SRL	96	96.264	Equus_caballus
ENSCPOG00000012643	SRL	100	77.618	ENSELUG00000015616	srl	97	78.723	Esox_lucius
ENSCPOG00000012643	SRL	100	96.617	ENSFCAG00000022075	SRL	100	96.617	Felis_catus
ENSCPOG00000012643	SRL	96	90.687	ENSFALG00000004328	SRL	64	90.687	Ficedula_albicollis
ENSCPOG00000012643	SRL	100	98.093	ENSFDAG00000006199	SRL	100	98.093	Fukomys_damarensis
ENSCPOG00000012643	SRL	100	70.697	ENSFHEG00000011854	SRL	98	76.471	Fundulus_heteroclitus
ENSCPOG00000012643	SRL	100	79.873	ENSFHEG00000011239	srl	97	81.278	Fundulus_heteroclitus
ENSCPOG00000012643	SRL	93	80.795	ENSGMOG00000014954	srl	99	80.795	Gadus_morhua
ENSCPOG00000012643	SRL	99	89.384	ENSGALG00000038884	SRL	96	90.308	Gallus_gallus
ENSCPOG00000012643	SRL	94	76.471	ENSGAFG00000016984	SRL	98	76.471	Gambusia_affinis
ENSCPOG00000012643	SRL	100	79.873	ENSGAFG00000000010	srl	97	82.472	Gambusia_affinis
ENSCPOG00000012643	SRL	93	81.015	ENSGACG00000011332	srl	99	81.015	Gasterosteus_aculeatus
ENSCPOG00000012643	SRL	100	96.195	ENSGGOG00000011312	-	97	97.155	Gorilla_gorilla
ENSCPOG00000012643	SRL	94	72.747	ENSHBUG00000015710	SRL	57	72.747	Haplochromis_burtoni
ENSCPOG00000012643	SRL	98	81.505	ENSHBUG00000007581	srl	98	82.444	Haplochromis_burtoni
ENSCPOG00000012643	SRL	100	98.517	ENSHGLG00000015271	SRL	100	98.517	Heterocephalus_glaber_female
ENSCPOG00000012643	SRL	100	98.517	ENSHGLG00100019378	SRL	100	98.517	Heterocephalus_glaber_male
ENSCPOG00000012643	SRL	94	72.627	ENSHCOG00000001012	SRL	50	71.523	Hippocampus_comes
ENSCPOG00000012643	SRL	99	80.000	ENSHCOG00000008687	srl	98	83.032	Hippocampus_comes
ENSCPOG00000012643	SRL	100	79.025	ENSIPUG00000012513	srl	96	80.574	Ictalurus_punctatus
ENSCPOG00000012643	SRL	92	70.642	ENSIPUG00000011609	SRL	95	69.495	Ictalurus_punctatus
ENSCPOG00000012643	SRL	100	98.517	ENSSTOG00000021151	-	100	98.517	Ictidomys_tridecemlineatus
ENSCPOG00000012643	SRL	100	97.669	ENSJJAG00000016400	Srl	100	97.669	Jaculus_jaculus
ENSCPOG00000012643	SRL	93	76.417	ENSKMAG00000019537	SRL	100	76.417	Kryptolebias_marmoratus
ENSCPOG00000012643	SRL	98	80.952	ENSKMAG00000014115	srl	93	85.273	Kryptolebias_marmoratus
ENSCPOG00000012643	SRL	96	74.342	ENSLBEG00000013811	SRL	98	74.123	Labrus_bergylta
ENSCPOG00000012643	SRL	100	80.508	ENSLBEG00000026643	srl	96	81.538	Labrus_bergylta
ENSCPOG00000012643	SRL	96	85.619	ENSLACG00000002825	SRL	99	85.619	Latimeria_chalumnae
ENSCPOG00000012643	SRL	99	82.516	ENSLOCG00000002644	srl	96	84.292	Lepisosteus_oculatus
ENSCPOG00000012643	SRL	96	96.903	ENSLAFG00000006329	SRL	51	96.903	Loxodonta_africana
ENSCPOG00000012643	SRL	91	97.912	ENSMFAG00000037383	SRL	100	97.912	Macaca_fascicularis
ENSCPOG00000012643	SRL	98	96.095	ENSMNEG00000019236	-	97	96.095	Macaca_nemestrina
ENSCPOG00000012643	SRL	100	88.584	ENSMLEG00000032156	SRL	96	88.840	Mandrillus_leucophaeus
ENSCPOG00000012643	SRL	99	79.787	ENSMAMG00000023322	srl	94	83.710	Mastacembelus_armatus
ENSCPOG00000012643	SRL	93	73.789	ENSMAMG00000013756	SRL	53	73.684	Mastacembelus_armatus
ENSCPOG00000012643	SRL	94	72.967	ENSMZEG00005004010	SRL	57	71.868	Maylandia_zebra
ENSCPOG00000012643	SRL	98	81.505	ENSMZEG00005004548	srl	98	82.444	Maylandia_zebra
ENSCPOG00000012643	SRL	96	91.353	ENSMGAG00000009342	SRL	95	92.819	Meleagris_gallopavo
ENSCPOG00000012643	SRL	96	96.053	ENSMICG00000032307	SRL	97	96.061	Microcebus_murinus
ENSCPOG00000012643	SRL	100	97.246	ENSMOCG00000008208	Srl	100	97.246	Microtus_ochrogaster
ENSCPOG00000012643	SRL	93	72.527	ENSMMOG00000021572	SRL	99	72.527	Mola_mola
ENSCPOG00000012643	SRL	94	83.032	ENSMMOG00000013970	srl	98	83.032	Mola_mola
ENSCPOG00000012643	SRL	96	96.909	ENSMODG00000016380	-	51	96.909	Monodelphis_domestica
ENSCPOG00000012643	SRL	100	80.550	ENSMALG00000005039	srl	98	82.805	Monopterus_albus
ENSCPOG00000012643	SRL	89	75.656	ENSMALG00000000670	SRL	98	74.702	Monopterus_albus
ENSCPOG00000012643	SRL	100	97.458	MGP_CAROLIEiJ_G0020400	Srl	100	97.458	Mus_caroli
ENSCPOG00000012643	SRL	100	97.458	ENSMUSG00000022519	Srl	100	97.458	Mus_musculus
ENSCPOG00000012643	SRL	100	97.458	MGP_SPRETEiJ_G0021294	Srl	100	97.458	Mus_spretus
ENSCPOG00000012643	SRL	96	97.788	ENSMPUG00000015025	SRL	55	97.788	Mustela_putorius_furo
ENSCPOG00000012643	SRL	98	95.662	ENSMLUG00000030733	SRL	58	95.662	Myotis_lucifugus
ENSCPOG00000012643	SRL	100	97.458	ENSNGAG00000019741	Srl	100	97.458	Nannospalax_galili
ENSCPOG00000012643	SRL	98	81.505	ENSNBRG00000023775	srl	96	82.301	Neolamprologus_brichardi
ENSCPOG00000012643	SRL	94	72.967	ENSNBRG00000002422	SRL	62	68.421	Neolamprologus_brichardi
ENSCPOG00000012643	SRL	100	89.641	ENSNLEG00000029051	SRL	96	90.153	Nomascus_leucogenys
ENSCPOG00000012643	SRL	97	90.435	ENSOPRG00000000477	-	53	91.189	Ochotona_princeps
ENSCPOG00000012643	SRL	100	98.305	ENSODEG00000013256	SRL	100	98.305	Octodon_degus
ENSCPOG00000012643	SRL	97	81.917	ENSONIG00000005192	srl	96	82.522	Oreochromis_niloticus
ENSCPOG00000012643	SRL	97	97.391	ENSOCUG00000025140	SRL	51	97.391	Oryctolagus_cuniculus
ENSCPOG00000012643	SRL	96	74.058	ENSORLG00000015064	SRL	98	74.058	Oryzias_latipes
ENSCPOG00000012643	SRL	100	79.449	ENSORLG00000008291	srl	92	84.794	Oryzias_latipes
ENSCPOG00000012643	SRL	100	79.661	ENSORLG00020019784	srl	79	85.052	Oryzias_latipes_hni
ENSCPOG00000012643	SRL	96	74.279	ENSORLG00020018173	SRL	98	74.279	Oryzias_latipes_hni
ENSCPOG00000012643	SRL	100	79.237	ENSORLG00015009342	srl	93	80.617	Oryzias_latipes_hsok
ENSCPOG00000012643	SRL	96	74.501	ENSORLG00015019063	SRL	98	74.501	Oryzias_latipes_hsok
ENSCPOG00000012643	SRL	100	79.873	ENSOMEG00000010006	srl	98	82.955	Oryzias_melastigma
ENSCPOG00000012643	SRL	94	72.648	ENSOMEG00000005682	SRL	53	72.967	Oryzias_melastigma
ENSCPOG00000012643	SRL	96	96.476	ENSOGAG00000029266	SRL	55	96.476	Otolemur_garnettii
ENSCPOG00000012643	SRL	99	95.914	ENSOARG00000003074	SRL	57	97.339	Ovis_aries
ENSCPOG00000012643	SRL	100	96.406	ENSPPAG00000024919	-	100	97.912	Pan_paniscus
ENSCPOG00000012643	SRL	100	96.829	ENSPPRG00000010274	SRL	100	98.144	Panthera_pardus
ENSCPOG00000012643	SRL	100	96.829	ENSPTIG00000015162	SRL	100	98.144	Panthera_tigris_altaica
ENSCPOG00000012643	SRL	100	96.406	ENSPTRG00000007712	SRL	100	97.912	Pan_troglodytes
ENSCPOG00000012643	SRL	98	96.312	ENSPANG00000013804	SRL	99	96.312	Papio_anubis
ENSCPOG00000012643	SRL	100	80.550	ENSPKIG00000006405	srl	93	83.937	Paramormyrops_kingsleyae
ENSCPOG00000012643	SRL	100	73.517	ENSPKIG00000024974	SRL	88	76.018	Paramormyrops_kingsleyae
ENSCPOG00000012643	SRL	96	90.749	ENSPSIG00000008586	SRL	51	90.749	Pelodiscus_sinensis
ENSCPOG00000012643	SRL	96	82.781	ENSPMGG00000021081	srl	97	82.781	Periophthalmus_magnuspinnatus
ENSCPOG00000012643	SRL	94	73.077	ENSPMGG00000023505	-	99	72.360	Periophthalmus_magnuspinnatus
ENSCPOG00000012643	SRL	100	97.669	ENSPEMG00000015842	Srl	100	97.669	Peromyscus_maniculatus_bairdii
ENSCPOG00000012643	SRL	89	67.890	ENSPMAG00000004786	srl	99	67.661	Petromyzon_marinus
ENSCPOG00000012643	SRL	96	96.231	ENSPCIG00000012128	SRL	98	96.231	Phascolarctos_cinereus
ENSCPOG00000012643	SRL	100	78.306	ENSPFOG00000011408	srl	94	80.921	Poecilia_formosa
ENSCPOG00000012643	SRL	94	76.018	ENSPLAG00000002932	SRL	98	74.887	Poecilia_latipinna
ENSCPOG00000012643	SRL	97	81.046	ENSPLAG00000008017	srl	97	82.697	Poecilia_latipinna
ENSCPOG00000012643	SRL	100	80.085	ENSPMEG00000006745	srl	97	82.697	Poecilia_mexicana
ENSCPOG00000012643	SRL	94	73.742	ENSPMEG00000005890	SRL	59	72.967	Poecilia_mexicana
ENSCPOG00000012643	SRL	94	77.149	ENSPREG00000000315	SRL	98	76.018	Poecilia_reticulata
ENSCPOG00000012643	SRL	100	79.661	ENSPREG00000007751	srl	99	82.472	Poecilia_reticulata
ENSCPOG00000012643	SRL	89	98.568	ENSPPYG00000007053	SRL	98	98.568	Pongo_abelii
ENSCPOG00000012643	SRL	96	95.364	ENSPCAG00000003378	-	51	95.364	Procavia_capensis
ENSCPOG00000012643	SRL	100	95.772	ENSPCOG00000023135	SRL	100	97.680	Propithecus_coquereli
ENSCPOG00000012643	SRL	96	98.230	ENSPVAG00000006586	SRL	56	98.230	Pteropus_vampyrus
ENSCPOG00000012643	SRL	94	72.967	ENSPNYG00000003423	SRL	57	71.868	Pundamilia_nyererei
ENSCPOG00000012643	SRL	98	81.505	ENSPNYG00000001200	srl	98	82.444	Pundamilia_nyererei
ENSCPOG00000012643	SRL	97	73.810	ENSPNAG00000007361	-	93	74.009	Pygocentrus_nattereri
ENSCPOG00000012643	SRL	100	78.390	ENSPNAG00000023106	srl	94	81.674	Pygocentrus_nattereri
ENSCPOG00000012643	SRL	97	96.943	ENSRNOG00000005269	Srl	51	96.943	Rattus_norvegicus
ENSCPOG00000012643	SRL	97	96.087	ENSRBIG00000042358	SRL	51	96.711	Rhinopithecus_bieti
ENSCPOG00000012643	SRL	94	97.517	ENSSBOG00000029273	SRL	97	96.718	Saimiri_boliviensis_boliviensis
ENSCPOG00000012643	SRL	97	96.272	ENSSHAG00000011715	-	51	96.272	Sarcophilus_harrisii
ENSCPOG00000012643	SRL	100	78.512	ENSSFOG00015009773	srl	97	82.819	Scleropages_formosus
ENSCPOG00000012643	SRL	94	76.697	ENSSFOG00015021327	SRL	51	75.109	Scleropages_formosus
ENSCPOG00000012643	SRL	93	73.304	ENSSMAG00000002232	SRL	50	72.088	Scophthalmus_maximus
ENSCPOG00000012643	SRL	100	80.127	ENSSMAG00000016274	srl	99	81.579	Scophthalmus_maximus
ENSCPOG00000012643	SRL	94	74.610	ENSSDUG00000009161	SRL	98	74.610	Seriola_dumerili
ENSCPOG00000012643	SRL	94	83.710	ENSSDUG00000010808	srl	97	83.710	Seriola_dumerili
ENSCPOG00000012643	SRL	94	74.179	ENSSLDG00000014601	SRL	99	74.286	Seriola_lalandi_dorsalis
ENSCPOG00000012643	SRL	96	82.561	ENSSLDG00000022024	srl	95	83.710	Seriola_lalandi_dorsalis
ENSCPOG00000012643	SRL	96	90.265	ENSSPUG00000016859	SRL	99	90.265	Sphenodon_punctatus
ENSCPOG00000012643	SRL	100	80.932	ENSSPAG00000019105	srl	96	82.561	Stegastes_partitus
ENSCPOG00000012643	SRL	93	75.964	ENSSPAG00000014254	SRL	98	74.830	Stegastes_partitus
ENSCPOG00000012643	SRL	96	96.468	ENSSSCG00000007949	SRL	99	96.875	Sus_scrofa
ENSCPOG00000012643	SRL	77	92.265	ENSTGUG00000016121	-	96	93.103	Taeniopygia_guttata
ENSCPOG00000012643	SRL	96	89.890	ENSTGUG00000003951	-	99	89.890	Taeniopygia_guttata
ENSCPOG00000012643	SRL	89	75.179	ENSTRUG00000013310	SRL	55	75.179	Takifugu_rubripes
ENSCPOG00000012643	SRL	100	80.508	ENSTRUG00000006005	srl	97	81.498	Takifugu_rubripes
ENSCPOG00000012643	SRL	96	81.278	ENSTNIG00000009739	srl	97	81.278	Tetraodon_nigroviridis
ENSCPOG00000012643	SRL	96	98.230	ENSUAMG00000005701	SRL	56	98.230	Ursus_americanus
ENSCPOG00000012643	SRL	96	98.009	ENSUMAG00000002574	SRL	56	98.009	Ursus_maritimus
ENSCPOG00000012643	SRL	96	97.577	ENSVVUG00000016331	-	50	97.577	Vulpes_vulpes
ENSCPOG00000012643	SRL	96	88.938	ENSXETG00000017313	srl	100	88.938	Xenopus_tropicalis
ENSCPOG00000012643	SRL	96	75.166	ENSXCOG00000014584	SRL	100	75.166	Xiphophorus_couchianus
ENSCPOG00000012643	SRL	89	85.273	ENSXCOG00000010424	srl	97	85.273	Xiphophorus_couchianus
ENSCPOG00000012643	SRL	100	80.297	ENSXMAG00000004625	srl	92	81.938	Xiphophorus_maculatus
ENSCPOG00000012643	SRL	94	74.066	ENSXMAG00000027598	SRL	62	73.626	Xiphophorus_maculatus